irvin.SecondaryComplex_to_Bid_initials() irvin.rip1_to_MLKL_initials() irvin.CD95_to_SecondaryComplex() #1 irvin.FADD_to_C8() irvin.NFkB_cFlip_interaction() #3 irvin.cFLIP_L_Bid_interaction() #4 irvin.RIP1_Hypothesis_1()#5 irvin.ComplexI_to_NFkB() irvin.ComplexII_Hypothesis_1() #5 irvin.RIP1_deubiqutination_Hypothesis_1()#5 irvin.RIP1_to_SecondaryComplex() irvin.RIP1_truncation() irvin.Bid_Hypothesis() #6 irvin.C8_catalyzed_truncations() irvin.rip1_to_MLKL() irvin.C3_inhibits_MLKL()#7 # From lopez_modules lopez.declare_initial_conditions() lopez.translocate_tBid_Bax_BclxL() lopez.tBid_activates_Bax_and_Bak() lopez.tBid_binds_all_anti_apoptotics() lopez.sensitizers_bind_anti_apoptotics() lopez.effectors_bind_anti_apoptotics() lopez.lopez_pore_formation(do_pore_transport=True) # From albeck_modules albeck.pore_to_parp() # Observables
irvin.TNFR1_to_ComplexI() #1 irvin.FADD_to_C8() irvin.cFlip_competitive_inhibition() #2 irvin.NFkB_cFlip_interaction() #3 irvin.cFLIP_L_Bid_interaction() #4 irvin.RIP1_Hypothesis_2() #5 irvin.ComplexI_to_NFkB() irvin.ComplexII_Hypothesis_2() #5 irvin.TRADD_RIP1unmod_Hypothesis_2() #5a irvin.RIP1_deubiqutination_Hypothesis_1() #5a irvin.RIP1_to_SecondaryComplex() irvin.RIP1_truncation() irvin.Bid_Hypothesis() #6 irvin.C8_catalyzed_truncations() irvin.rip1_to_MLKL() irvin.C3_inhibits_MLKL() #7 # From lopez_modules lopez.declare_initial_conditions() lopez.translocate_tBid_Bax_BclxL() lopez.tBid_activates_Bax_and_Bak() lopez.tBid_binds_all_anti_apoptotics() lopez.sensitizers_bind_anti_apoptotics() lopez.effectors_bind_anti_apoptotics() lopez.lopez_pore_formation(do_pore_transport=True) # From albeck_modules albeck.pore_to_parp() # Observables
