# =============================================================================
# Start of code
# =============================================================================
if __name__ == "__main__":
# load table
table = Table.read(OBJECT_FILE, format='csv')
if USE_DATABASE:
from apero.core import constants
from apero.core.core import drs_database
# get object database
ObjectDatabase = drs_database.ObjectDatabase
params = constants.load('SPIROU')
pconst = constants.pload('SPIROU')
params.set('OBJ_LIST_CROSS_MATCH_RADIUS', value=CMRADIUS)
params.set('OBJ_LIST_GAIA_PLX_LIM', value=0.5)
params.set('OBJ_LIST_GOOGLE_SHEET_URL',
value='1jwlux8AJjBMMVrbg6LszJIpFJrk6alhbT5HA7BiAHD8')
params.set('OBJ_LIST_GOOGLE_SHEET_WNUM', value=0)
# load database
objdbm = ObjectDatabase(params)
objdbm.load_db()
# for now delete database
columns, ctypes = pconst.OBJECT_DB_COLUMNS()
objdbm.database.delete_table('MAIN')
def main():
keys = dict()
keys['MAJOR'] = sys.version_info.major
keys['MINOR'] = sys.version_info.minor
keys['MICRO'] = sys.version_info.micro
# get python path
if 'PYTHONPATH' in os.environ:
pythonpath = os.environ['PYTHONPATH']
keys['PYTHONPATH'] = '\t\t' + '\n\t\t'.join(
pythonpath.split(os.pathsep))
else:
keys['PYTHONPATH'] = 'None'
# get path
if 'PATH' in os.environ:
path = os.environ['PATH']
keys['PATH'] = '\t\t' + '\n\t\t'.join(path.split(os.pathsep))
else:
keys['PATH'] = 'None'
# get DRS_UCONFIG
if 'DRS_UCONFIG' in os.environ:
keys['DRS_UCONFIG'] = os.environ['DRS_UCONFIG']
else:
keys['DRS_UCONFIG'] = 'None'
# get modules
try:
import astropy
keys['ASTROPY'] = astropy.__version__
except:
keys['ASTROPY'] = 'NOT FOUND'
try:
import barycorrpy
keys['BARYCORRPY'] = barycorrpy.__version__
except:
keys['BARYCORRPY'] = 'NOT FOUND'
try:
import bottleneck
keys['BOTTLENECK'] = bottleneck.__version__
except:
keys['BOTTLENECK'] = 'NOT FOUND'
try:
import numpy
keys['NUMPY'] = numpy.__version__
except:
keys['NUMPY'] = 'NOT FOUND'
try:
import numba
keys['NUMBA'] = numba.__version__
except:
keys['NUMBA'] = 'NOT FOUND'
try:
import matplotlib
keys['MATPLOTLIB'] = matplotlib.__version__
except:
keys['MATPLOTLIB'] = 'NOT FOUND'
try:
import scipy
keys['SCIPY'] = scipy.__version__
except:
keys['SCIPY'] = 'NOT FOUND'
# apero setup
try:
import apero
from apero.core import drs_startup as drs
from apero.core import constants
instruments = drs.Constants['DRS_INSTRUMENTS']
keys['APERO_VERSION'] = drs.__version__
variables = ''
variables += '\nAPERO DATE: {0}'.format(drs.__date__)
variables += '\nAPERO PATH: {0}'.format(apero.__path__[0])
variables += '\n'
variables += '\nINSTALLED INSTRUMENTS: ' + ', '.join(instruments)
for instrument in instruments:
params = constants.load(instrument)
# add variables
variables += '\n\n' + '=' * 50
variables += '\n\t' + instrument
variables += '\n' + '=' * 50 + '\n'
variables += '\nDRS_ROOT: ' + params['DRS_ROOT']
variables += '\nDRS_DATA_RAW: ' + params['DRS_DATA_RAW']
variables += '\nDRS_DATA_REDUC: ' + params['DRS_DATA_REDUC']
variables += '\nDRS_CALIB_DB: ' + params['DRS_CALIB_DB']
variables += '\nDRS_TELLU_DB: ' + params['DRS_TELLU_DB']
variables += '\nDRS_DATA_MSG: ' + params['DRS_DATA_MSG']
variables += '\nDRS_DATA_WORKING: ' + params['DRS_DATA_WORKING']
variables += '\nDRS_DATA_RUN: ' + params['DRS_DATA_RUN']
keys['APERO_VARIABLES'] = variables
except:
keys['APERO_VERSION'] = 'NOT FOUND'
keys['APERO_VARIABLES'] = ''
# computer information
keys['COMPUTER_RELEASE'] = platform.release()
keys['COMPUTER_ARCHITECTURE'] = platform.machine()
keys['COMPUTER_VERSION'] = platform.machine()
keys['COMPUTER_SYSTEM'] = platform.system()
keys['COMPUTER_PROCESSOR'] = platform.processor()
totalmem = psutil.virtual_memory().total
keys['COMPUTER_RAM'] = str(round(totalmem / (1024.0**3))) + " GB"
keys['USER'] = getpass.getuser()
keys['HOST'] = socket.gethostname()
keys['HOME'] = os.path.expanduser("~")
print_string = """
================================================================================
APERO
================================================================================
DRS_UCONFIG = {DRS_UCONFIG}
APERO: {APERO_VERSION}
{APERO_VARIABLES}
================================================================================
PYTHON
================================================================================
PYTHON VERSION = {MAJOR}.{MINOR}.{MICRO}
PYTHON PATH:
{PYTHONPATH}
ASTROPY: {ASTROPY}
BARYCORRPY: {BARYCORRPY}
BOTTLENECK: {BOTTLENECK}
NUMPY: {NUMPY}
NUMBA: {NUMBA}
MATPLOTLIB: {MATPLOTLIB}
SCIPY: {SCIPY}
================================================================================
COMPUTER
================================================================================
SYSTEM = {COMPUTER_SYSTEM}
RELEASE = {COMPUTER_RELEASE}
VERSION = {COMPUTER_VERSION}
ARCHITECTURE = {COMPUTER_ARCHITECTURE}
PROCESSOR = {COMPUTER_PROCESSOR}
RAM = {COMPUTER_RAM}
USER = {USER}
HOST = {HOST}
HOME = {HOME}
PATH:
{PATH}
"""
print(print_string.format(**keys))
import os from apero import core from apero import locale from apero.core import constants from apero.io import drs_fits from apero.science import extract from apero.tools.module.testing import drs_dev # ============================================================================= # Define variables # ============================================================================= __NAME__ = 'cal_update_berv.py' __INSTRUMENT__ = 'SPIROU' # Get constants Constants = constants.load(__INSTRUMENT__) # Get version and author __version__ = Constants['DRS_VERSION'] __author__ = Constants['AUTHORS'] __date__ = Constants['DRS_DATE'] __release__ = Constants['DRS_RELEASE'] # get param dict ParamDict = constants.ParamDict # Get Logging function WLOG = core.wlog # Get the text types TextEntry = locale.drs_text.TextEntry TextDict = locale.drs_text.TextDict # ----------------------------------------------------------------------------- # set up recipe definitions (overwrites default one) RMOD = drs_dev.RecipeDefinition(instrument=__INSTRUMENT__)
# list all drs output types that should be found
kw_outputs = ['EXT_E2DS_FF']
# list all fibers required
kw_fibers = ['AB']
# outpath (where we should copy these to)
OUTPATH = '/home/boucher/spirou/planetModels/HD_189733_b/full_210523'
# copy (debug set to False)
COPY = True
# =============================================================================
# Start of code
# =============================================================================
if __name__ == "__main__":
# load the constants
print('Starting APERO...')
params = constants.load()
pconst = constants.pload()
# load index database
print('Loading database...')
indexdb = drs_database.IndexDatabase(params)
indexdb.load_db()
# -------------------------------------------------------------------------
# create master condition
master_condition = ''
# ---------------------------------------------------------------------
# dprtypes
# ---------------------------------------------------------------------
if kw_dprtypes is not None:
subconditions = []
# loop around object names