def handle_single_ofile(changed_file, base_dir, target_repo):
"""
assuming the change_file is an ontology file
:param changed_file: relative directory of the file e.g. dir1/dir2/my.owl
:return:
"""
import ar2dtool
import widoco
import oops
dolog("will call create or get conf")
conf = create_of_get_conf(changed_file, base_dir)
dolog("conf: "+str(conf))
if conf['ar2dtool_enable']:
dolog("will call draw diagrams")
ar2dtool.draw_diagrams([changed_file], base_dir)
if conf['widoco_enable']:
dolog('will call widoco')
widoco.generate_widoco_docs([changed_file], base_dir)
if conf['oops_enable']:
dolog('will call oops')
oops.oops_ont_files(target_repo=target_repo, changed_files=[changed_file], base_dir=base_dir)
def handle_single_ofile(changed_file, base_dir, target_repo):
"""
assuming the change_file is an ontology file
:param changed_file: relative directory of the file e.g. dir1/dir2/my.owl
:return:
"""
import ar2dtool
import widoco
import oops
dolog("will call create or get conf")
conf = create_of_get_conf(changed_file, base_dir)
dolog("conf: " + str(conf))
if conf['ar2dtool_enable']:
dolog("will call draw diagrams")
ar2dtool.draw_diagrams([changed_file], base_dir)
if conf['widoco_enable']:
dolog('will call widoco')
widoco.generate_widoco_docs([changed_file], base_dir)
if conf['oops_enable']:
dolog('will call oops')
oops.oops_ont_files(target_repo=target_repo,
changed_files=[changed_file],
base_dir=base_dir)
def handle_single_ofile(changed_file,
base_dir,
target_repo,
change_status,
repo=None,
progress_inc=0.0):
"""
assuming the change_file is an ontology file
:param changed_file: relative directory of the file e.g. dir1/dir2/my.owl
:param base_dir:
:param target_repo:
:param change_status:
:param repo: a Repo instance of the target repo
:param progress_inc: how much to increment the progress after each
:return:
"""
import ar2dtool
import widoco
import oops
import owl2jsonld
import syntaxchecker
import themis
dolog("will call create or get conf")
conf = create_of_get_conf(changed_file, base_dir)
dolog("conf: " + str(conf))
if not syntaxchecker.valid_syntax(os.path.join(base_dir, changed_file)):
repo.notes += "syntax error in %s\n" % changed_file
repo.save()
return
if conf['ar2dtool']['enable']:
dolog("will call draw diagrams")
change_status(target_repo, 'drawing diagrams for: ' + changed_file)
repo.update_ontology_status(ontology=changed_file, status='diagram')
repo.save()
try:
r = ar2dtool.draw_diagrams([changed_file], base_dir)
# if r != "":
# print 'in init draw detected an error'
# # repo.notes += 'Error generating diagrams for %s. ' % changed_file
# repo.save()
except Exception as e:
dolog("Exception in running ar2dtool.draw_diagrams: " + str(e))
repo.progress += progress_inc
repo.save()
if conf['widoco']['enable']:
dolog('will call widoco')
change_status(target_repo, 'generating docs for: ' + changed_file)
repo.update_ontology_status(ontology=changed_file,
status='documentation')
repo.save()
try:
r = widoco.generate_widoco_docs(
[changed_file],
base_dir,
languages=conf['widoco']['languages'])
# if r != "":
# print 'in init documentation detected an error for ontology file: %s' % changed_file
# # repo.notes += 'Error generating documentation for %s. ' % changed_file
# repo.save()
except Exception as e:
dolog("Exception in running widoco.generate_widoco_docs: " +
str(e))
repo.progress += progress_inc
repo.save()
if conf['oops']['enable']:
dolog('will call oops')
change_status(target_repo, 'evaluating: ' + changed_file)
repo.update_ontology_status(ontology=changed_file, status='evaluation')
repo.save()
try:
r = oops.oops_ont_files(target_repo=target_repo,
changed_files=[changed_file],
base_dir=base_dir)
# if r != "":
# print 'in init evaluation detected an error'
# # repo.notes += 'Error generating evaluation for %s. ' % changed_file
# repo.save()
if r != "":
dolog("Error in producing OOPS! report: " + str(r))
repo.notes += "Error in producing the evaluation report for: %s" % str(
changed_file)
repo.save()
except Exception as e:
dolog("Exception in running oops.oops.oops_ont_files: " + str(e))
repo.progress += progress_inc
repo.save()
if conf['owl2jsonld']['enable']:
dolog('will call owl2jsonld')
change_status(target_repo, 'generating context for: ' + changed_file)
repo.update_ontology_status(ontology=changed_file, status='jsonld')
repo.save()
try:
owl2jsonld.generate_owl2jsonld_file([changed_file],
base_dir=base_dir)
except Exception as e:
dolog(
"Exception in running owl2jsonld.generate_owl2jsonld_file: " +
str(e))
repo.progress += progress_inc
if conf['themis']['enable']:
dolog('will call themis')
change_status(target_repo,
'generating validation for: ' + changed_file)
repo.update_ontology_status(ontology=changed_file, status='validation')
repo.save()
try:
themis.validate_ontologies(target_repo=target_repo,
changed_files=[changed_file],
base_dir=base_dir)
except Exception as e:
dolog("Exception in running themis: " + str(e))
repo.update_ontology_status(ontology=changed_file, status='finished')
repo.save()