def __init__(self, relation_type, identifier, label, identifier_prefix,rdfs_domain, prefixDomain, rdfs_range, prefixRange):
type_range = identifier
idx = identifier.find("@")
if idx > 0:
uridi = identifier[0:idx]
else:
uridi = identifier
if label == "":
if idx > 0:
self.label = identifier[0:idx]
else:
self.label = identifier
else:
self.label = label
self.uri = ParamManager.encode_to_rdf_uri(uridi,prefix="askomics:")
self.rdfs_range = rdfs_range
if relation_type.startswith("entity"):
self.relation_type = "owl:ObjectProperty"
elif relation_type == "goterm":
self.relation_type = "owl:ObjectProperty"
self.rdfs_range = "owl:Class"
else:
self.relation_type = "owl:DatatypeProperty"
self.rdfs_domain = ParamManager.encode_to_rdf_uri(rdfs_domain,prefixDomain)
self.log = logging.getLogger(__name__)
def test_encode_to_rdf_uri(self):
r = ParamManager.encode_to_rdf_uri("A",prefix="http://helloworld/test/")
assert r == "<http://helloworld/test/A>"
r = ParamManager.encode_to_rdf_uri("A",prefix="<http://helloworld/test/>")
assert r == "<http://helloworld/test/A>"
r = ParamManager.encode_to_rdf_uri("A<A>A",prefix="<http://helloworld/test/>")
assert r == "<http://helloworld/test/A_s3_3CA_s3_3EA>"
def test_encode_to_rdf_uri(self):
r = ParamManager.encode_to_rdf_uri("A",prefix="http://helloworld/test/")
assert r == "<http://helloworld/test/A>"
r = ParamManager.encode_to_rdf_uri("A",prefix="<http://helloworld/test/>")
assert r == "<http://helloworld/test/A>"
r = ParamManager.encode_to_rdf_uri("A<A>A",prefix="<http://helloworld/test/>")
assert r == "<http://helloworld/test/A_s3_3CA_s3_3EA>"
def __init__(self, relation_type, identifier, rdfs_domain, rdfs_range):
idx = identifier.find("@")
type_range = identifier
#Keep compatibility with old version
if idx != -1:
type_range = identifier[idx + 1:len(identifier)]
self.label = identifier[0:idx]
else:
self.label = identifier
if self.label.find(":") < 0:
self.uri = ":" + ParamManager.encode_to_rdf_uri(self.label)
else:
self.uri = self.label
self.col_type = relation_type
if relation_type.startswith("entity"):
self.relation_type = "owl:ObjectProperty"
if type_range.find(":") < 0:
self.rdfs_range = ":" + ParamManager.encode_to_rdf_uri(
type_range)
else:
self.rdfs_range = type_range
elif relation_type == "goterm":
self.relation_type = "owl:ObjectProperty"
self.rdfs_range = "owl:Class"
elif relation_type.lower() in ('category', 'taxon', 'ref', 'strand'):
self.relation_type = "owl:ObjectProperty"
self.rdfs_range = ":" + ParamManager.encode_to_rdf_uri(type_range +
"Category")
else:
self.relation_type = "owl:DatatypeProperty"
self.rdfs_range = rdfs_range
self.rdfs_domain = ":" + ParamManager.encode_to_rdf_uri(rdfs_domain)
self.log = logging.getLogger(__name__)
def test_decode_to_rdf_uri(self):
r = ParamManager.encode_to_rdf_uri("@&###:::123%%%%!!!")
assert ParamManager.decode_to_rdf_uri(r) == "@&###:::123%%%%!!!"
def test_encode_to_rdf_uri(self):
r = ParamManager.encode_to_rdf_uri("@&###:::123%%%%!!!")
assert r != "@&###123%%%%!!!"
def __init__(self, identifier):
self.uri = ":" + ParamManager.encode_to_rdf_uri(identifier)
self.label = identifier
self.log = logging.getLogger(__name__)
def test_decode_to_rdf_uri(self):
r = ParamManager.encode_to_rdf_uri("A",prefix="<http://helloworld/test/>")
assert ParamManager.decode_to_rdf_uri(r,prefix="http://helloworld/test/") == "A"
def test_decode_to_rdf_uri(self):
r = ParamManager.encode_to_rdf_uri("A",prefix="<http://helloworld/test/>")
assert ParamManager.decode_to_rdf_uri(r,prefix="http://helloworld/test/") == "A"
def __init__(self, identifier):
self.uri = ":" + ParamManager.encode_to_rdf_uri(identifier)
self.label = identifier
self.log = logging.getLogger(__name__)
def test_decode_to_rdf_uri(self):
r = ParamManager.encode_to_rdf_uri("@&###:::123%%%%!!!")
assert ParamManager.decode_to_rdf_uri(r) == "@&###:::123%%%%!!!"
def test_encode_to_rdf_uri(self):
r = ParamManager.encode_to_rdf_uri("@&###:::123%%%%!!!")
assert r != "@&###123%%%%!!!"