def test_parse_hgts_jane4(self):
""" Test functionality of parse_hgts() for Jane 4
"""
with open(self.jane4_output_hgt_fp, 'r') as f:
output = parse_hgts(f, 'jane4')
self.assertEqual(int(output), 1)
def test_parse_hgts_rangerdtl(self):
""" Test functionality of parse_hgts() for RANGER-DTL-U
"""
with open(self.rangerdtl_output_hgt_fp, 'r') as f:
output = parse_hgts(f, 'ranger-dtl')
self.assertEqual(int(output), 1)
def test_parse_hgts_riatahgt(self):
""" Test functionality of parse_hgts() for RIATA-HGT in PhyloNet
"""
with open(self.riatahgt_output_hgt_fp, 'r') as f:
output = parse_hgts(f, 'riata-hgt')
self.assertEqual(int(output), 1)
def test_parse_hgts_trex(self):
""" Test functionality of parse_hgts() for TREX
"""
with open(self.trex_output_hgt_fp, 'r') as f:
output = parse_hgts(f, 'trex')
self.assertEqual(int(output), 1)
def test_parse_hgts_jane4(self):
""" Test functionality of parse_hgts() for Jane 4
"""
with open(self.jane4_output_hgt_fp, 'r') as f:
output = parse_hgts(f, 'jane4')
self.assertEqual(int(output), 1)
def test_parse_hgts_riatahgt(self):
""" Test functionality of parse_hgts() for RIATA-HGT in PhyloNet
"""
with open(self.riatahgt_output_hgt_fp, 'r') as f:
output = parse_hgts(f, 'riata-hgt')
self.assertEqual(int(output), 1)
def test_parse_hgts_rangerdtl(self):
""" Test functionality of parse_hgts() for RANGER-DTL-U
"""
with open(self.rangerdtl_output_hgt_fp, 'r') as f:
output = parse_hgts(f, 'ranger-dtl')
self.assertEqual(int(output), 1)
def test_parse_hgts_trex(self):
""" Test functionality of parse_hgts() for TREX
"""
with open(self.trex_output_hgt_fp, 'r') as f:
output = parse_hgts(f, 'trex')
self.assertEqual(int(output), 1)