def test_json_deserialization_supplied_schema(self):
# when a scheme is supplied it shall be used for deserialization
# correct case no information in json object about schema
class BGEdgeJSONSchemeDefaultVertex1(BGEdge.BGEdgeJSONSchema):
vertex1_id = fields.Int(attribute="vertex1_json_id",
required=False,
default=1,
missing=1)
json_object = {
"vertex1_id": 1,
"vertex2_id": 2,
"multicolor": [1, 2, 3, 4]
}
result = BGEdge.from_json(
data=json_object, json_schema_class=BGEdgeJSONSchemeDefaultVertex1)
self.assertTrue(isinstance(result, BGEdge))
self.assertEqual(result.vertex1, 1)
self.assertEqual(result.vertex2, 2)
self.assertListEqual(result.multicolor, [1, 2, 3, 4])
# correct case with information about json object schema
# such information about json schema shall be ignored at the BGEdge deserialization level
json_object = {
BGEdge_JSON_SCHEMA_JSON_KEY: "dummy_string",
"vertex1_id": 1,
"vertex2_id": 2,
"multicolor": [1, 2, 3, 4]
}
result = BGEdge.from_json(
data=json_object, json_schema_class=BGEdgeJSONSchemeDefaultVertex1)
self.assertTrue(isinstance(result, BGEdge))
self.assertEqual(result.vertex1, 1)
self.assertEqual(result.vertex2, 2)
self.assertListEqual(result.multicolor, [1, 2, 3, 4])
# incorrect case with at least one vertex id not present in json object
json_object = {"vertex2_id": 2, "multicolor": [1, 2, 3, 4]}
result = BGEdge.from_json(
data=json_object, json_schema_class=BGEdgeJSONSchemeDefaultVertex1)
self.assertTrue(isinstance(result, BGEdge))
self.assertEqual(result.vertex1, 1)
self.assertEqual(result.vertex2, 2)
self.assertListEqual(result.multicolor, [1, 2, 3, 4])
json_object = {"vertex1_id": 2, "multicolor": [1, 2, 3, 4]}
with self.assertRaises(ValidationError):
BGEdge.from_json(data=json_object)
# incorrect case with no multicolor present in json object
json_object = {
"vertex2_id": 2,
"vertex1_id": 1,
}
with self.assertRaises(ValidationError):
BGEdge.from_json(data=json_object)
def test_json_deserialization_default_schema(self):
# with no scheme is supplied, default scheme for the BGVertex is applied
# deserialization for vertices and multicolor shall be performed as is, but then it will be resupplied from
# the overviewing BreakpointGraph
# correct case no information in json object about schema
json_object = {
"vertex1_id": 1,
"vertex2_id": 2,
"multicolor": [1, 2, 3, 4]
}
result = BGEdge.from_json(data=json_object)
self.assertTrue(isinstance(result, BGEdge))
self.assertEqual(result.vertex1, 1)
self.assertEqual(result.vertex2, 2)
self.assertListEqual(result.multicolor, [1, 2, 3, 4])
# correct case with information about json object schema
# such information about json schema shall be ignored at the BGEdge deserialization level
json_object = {
BGEdge_JSON_SCHEMA_JSON_KEY: "dummy_string",
"vertex1_id": 1,
"vertex2_id": 2,
"multicolor": [1, 2, 3, 4]
}
result = BGEdge.from_json(data=json_object)
self.assertTrue(isinstance(result, BGEdge))
self.assertEqual(result.vertex1, 1)
self.assertEqual(result.vertex2, 2)
self.assertListEqual(result.multicolor, [1, 2, 3, 4])
# incorrect case with at least one vertex id not present in json object
json_object = {"vertex2_id": 2, "multicolor": [1, 2, 3, 4]}
with self.assertRaises(ValidationError):
BGEdge.from_json(data=json_object)
json_object = {"vertex1_id": 2, "multicolor": [1, 2, 3, 4]}
with self.assertRaises(ValidationError):
BGEdge.from_json(data=json_object)
# incorrect case with no multicolor present in json object
json_object = {
"vertex2_id": 2,
"vertex1_id": 1,
}
with self.assertRaises(ValidationError):
BGEdge.from_json(data=json_object)
