def test_content_entries_only(self):
with open('bibtexparser/tests/data/multiple_entries_and_comments.bib') as bibtex_file:
bib_database = bibtexparser.load(bibtex_file)
writer = BibTexWriter()
writer.contents = ['entries']
result = bibtexparser.dumps(bib_database, writer)
expected = \
"""@book{Toto3000,
author = {Toto, A and Titi, B},
title = {A title}
}
@article{Wigner1938,
author = {Wigner, E.},
doi = {10.1039/TF9383400029},
issn = {0014-7672},
journal = {Trans. Faraday Soc.},
owner = {fr},
pages = {29--41},
publisher = {The Royal Society of Chemistry},
title = {The transition state method},
volume = {34},
year = {1938}
}
@book{Yablon2005,
author = {Yablon, A.D.},
publisher = {Springer},
title = {Optical fiber fusion slicing},
year = {2005}
}
"""
self.assertEqual(result, expected)
def main():
p = argparse.ArgumentParser()
p.add_argument("input_file",
help='The original .bib file you want to sanitize.')
p.add_argument("config", help='The config file in JSON format.')
p.add_argument("output_file", help='Name of the new sanitized file.')
args = p.parse_args()
# parse original bibfile
with open(args.input_file) as bibFile:
bibDB = bibtexparser.load(bibFile)
# parse config file
with open(args.config) as configFile:
confDB = json.load(configFile)
checkDuplicates(args.input_file)
bibDB = checkMandatoryFieldsAndKeywords(bibDB, confDB['read_config'])
checkTags(bibDB, confDB['read_config']['tag_regex'])
# write results
writer = BibTexWriter()
writer.contents = ['entries']
# use ordering that is defined in "sort_order" in the config.json file
writer.order_entries_by = confDB["write_config"]["sort_order"]
with open(args.output_file, 'w') as resFile:
resFile.write(bibtexparser.dumps(bibDB, writer))
def test_align(self):
bib_database = BibDatabase()
bib_database.entries = [{
'ID': 'abc123',
'ENTRYTYPE': 'book',
'author': 'test',
'thisisaverylongkey': 'longvalue'
}]
writer = BibTexWriter()
writer.align_values = True
result = bibtexparser.dumps(bib_database, writer)
expected = \
"""@book{abc123,
author = {test},
thisisaverylongkey = {longvalue}
}
"""
self.assertEqual(result, expected)
with open('bibtexparser/tests/data/multiple_entries_and_comments.bib'
) as bibtex_file:
bib_database = bibtexparser.load(bibtex_file)
writer = BibTexWriter()
writer.contents = ['entries']
writer.align_values = True
result = bibtexparser.dumps(bib_database, writer)
expected = \
"""@book{Toto3000,
author = {Toto, A and Titi, B},
title = {A title}
}
@article{Wigner1938,
author = {Wigner, E.},
doi = {10.1039/TF9383400029},
issn = {0014-7672},
journal = {Trans. Faraday Soc.},
owner = {fr},
pages = {29--41},
publisher = {The Royal Society of Chemistry},
title = {The transition state method},
volume = {34},
year = {1938}
}
@book{Yablon2005,
author = {Yablon, A.D.},
publisher = {Springer},
title = {Optical fiber fusion slicing},
year = {2005}
}
"""
self.assertEqual(result, expected)
def dumps(bibman):
db = bibtexparser.bparser.BibDatabase()
db._entries_dict = bibman.cleaned
db.entries = list(bibman.cleaned.values())
writer = BibTexWriter()
# writer.order_entries_by = ('type', 'author', 'year')
writer.order_entries_by = None
writer.contents = ['comments', 'entries']
writer.indent = ' '
new_text = bibtexparser.dumps(db, writer)
return new_text
def test_align(self):
bib_database = BibDatabase()
bib_database.entries = [{'ID': 'abc123',
'ENTRYTYPE': 'book',
'author': 'test',
'thisisaverylongkey': 'longvalue'}]
writer = BibTexWriter()
writer.align_values = True
result = bibtexparser.dumps(bib_database, writer)
expected = \
"""@book{abc123,
author = {test},
thisisaverylongkey = {longvalue}
}
"""
self.assertEqual(result, expected)
with open('bibtexparser/tests/data/multiple_entries_and_comments.bib') as bibtex_file:
bib_database = bibtexparser.load(bibtex_file)
writer = BibTexWriter()
writer.contents = ['entries']
writer.align_values = True
result = bibtexparser.dumps(bib_database, writer)
expected = \
"""@book{Toto3000,
author = {Toto, A and Titi, B},
title = {A title}
}
@article{Wigner1938,
author = {Wigner, E.},
doi = {10.1039/TF9383400029},
issn = {0014-7672},
journal = {Trans. Faraday Soc.},
owner = {fr},
pages = {29--41},
publisher = {The Royal Society of Chemistry},
title = {The transition state method},
volume = {34},
year = {1938}
}
@book{Yablon2005,
author = {Yablon, A.D.},
publisher = {Springer},
title = {Optical fiber fusion slicing},
year = {2005}
}
"""
self.assertEqual(result, expected)
def test_content_comment_only(self):
with open('bibtexparser/tests/data/multiple_entries_and_comments.bib') as bibtex_file:
bib_database = bibtexparser.load(bibtex_file)
writer = BibTexWriter()
writer.contents = ['comments']
result = bibtexparser.dumps(bib_database, writer)
expected = \
"""@comment{}
@comment{A comment}
"""
self.assertEqual(result, expected)
def _cleanupBibTex(self, count):
""" Clean up bibtex and ensure uniform look. """
import bibtexparser
from bibtexparser.bparser import BibTexParser
parser = BibTexParser()
parser.customization = homogeneize_latex_encoding
bib = bibtexparser.loads(self.refs, parser=parser)
# save results
from bibtexparser.bwriter import BibTexWriter
writer = BibTexWriter()
writer.contents = ['entries']
writer.indent = ' '
writer.order_entries_by = ('id')
self.number = len(bib.entries)
self.refs = bibtexparser.dumps(bib, writer)
def main():
output = sys.argv[1]
mds = sys.argv[2:]
es = []
for fn in mds:
# print(f"loading {fn}")
with open(fn, "r", encoding='UTF-8') as f:
ls = f.readlines()[1:]
ls = itertools.takewhile(lambda x: x != "---\n", ls)
e = yaml.load("".join(ls), Loader=yaml.FullLoader)
e['ID'] = fn.split("/")[1][0:-3]
for i in ['title', 'booktitle']:
if i in e:
s = e[i]
s = s.replace("#", "\#")
s = s.replace("&", "\&")
e[i] = s
e['title'] = "{" + e['title'] + "}"
if 'authors' in e:
e['author'] = " and ".join(e['authors'])
del e['authors']
for i in ['isbn', 'pages', 'volume', 'year']:
if i in e: e[i] = str(e[i])
for i in [
'added', 'layout', 'notes', 'papers', 'read', 'readings',
'topics'
]:
if i in e: del e[i]
es.append(e)
db = BibDatabase()
db.entries = es
writer = BibTexWriter()
writer.contents = ['entries']
writer.indent = ' '
# writer.order_entries_by = ('ENTRYTYPE', 'author', 'year')
bibtex_str = bibtexparser.dumps(db, writer)
with open(output, "w") as f:
print(("#############################################\n"
"# This file is machine generated, do not edit\n"
"#############################################\n"),
file=f)
print(bibtex_str, file=f)
def write_bibtex(bibtex_entries):
bib_database = bibtexparser.bibdatabase.BibDatabase()
for e in bibtex_entries:
# pop the useless contents
e.pop('created_time', None)
e.pop('file', None)
e.pop('abstract', None)
for k in e:
if isinstance(e[k], list):
e[k] = ' and '.join(e[k])
e[k] = unicode_to_latex(e[k])
bib_database.entries = bibtex_entries
writer = BibTexWriter()
writer.contents = ['comments', 'entries']
writer.indent = ' '
writer.order_entries_by = ('ENTRYTYPE', 'author', 'year')
bibtex_str = bibtexparser.dumps(bib_database, writer)
return bibtex_str
def main(bib_fpath=None):
r"""
intro point to fixbib script
CommmandLine:
fixbib
python -m fixtex bib
python -m fixtex bib --dryrun
python -m fixtex bib --dryrun --debug
"""
if bib_fpath is None:
bib_fpath = 'My Library.bib'
# DEBUG = ub.argflag('--debug')
# Read in text and ensure ascii format
dirty_text = ut.readfrom(bib_fpath)
from fixtex.fix_tex import find_used_citations, testdata_fpaths
if exists('custom_extra.bib'):
extra_parser = bparser.BibTexParser(ignore_nonstandard_types=False)
parser = bparser.BibTexParser()
ut.delete_keys(parser.alt_dict, ['url', 'urls'])
print('Parsing extra bibtex file')
extra_text = ut.readfrom('custom_extra.bib')
extra_database = extra_parser.parse(extra_text, partial=False)
print('Finished parsing extra')
extra_dict = extra_database.get_entry_dict()
else:
extra_dict = None
#udata = dirty_text.decode("utf-8")
#dirty_text = udata.encode("ascii", "ignore")
#dirty_text = udata
# parser = bparser.BibTexParser()
# bib_database = parser.parse(dirty_text)
# d = bib_database.get_entry_dict()
print('BIBTEXPARSER LOAD')
parser = bparser.BibTexParser(ignore_nonstandard_types=False,
common_strings=True)
ut.delete_keys(parser.alt_dict, ['url', 'urls'])
print('Parsing bibtex file')
bib_database = parser.parse(dirty_text, partial=False)
print('Finished parsing')
bibtex_dict = bib_database.get_entry_dict()
old_keys = list(bibtex_dict.keys())
new_keys = []
for key in ub.ProgIter(old_keys, label='fixing keys'):
new_key = key
new_key = new_key.replace(':', '')
new_key = new_key.replace('-', '_')
new_key = re.sub('__*', '_', new_key)
new_keys.append(new_key)
# assert len(ut.find_duplicate_items(new_keys)) == 0, 'new keys created conflict'
assert len(ub.find_duplicates(new_keys)) == 0, 'new keys created conflict'
for key, new_key in zip(old_keys, new_keys):
if key != new_key:
entry = bibtex_dict[key]
entry['ID'] = new_key
bibtex_dict[new_key] = entry
del bibtex_dict[key]
# The bibtext is now clean. Print it to stdout
#print(clean_text)
verbose = None
if verbose is None:
verbose = 1
# Find citations from the tex documents
key_list = None
if key_list is None:
cacher = ub.Cacher('texcite1', enabled=0)
data = cacher.tryload()
if data is None:
fpaths = testdata_fpaths()
key_list, inverse = find_used_citations(fpaths,
return_inverse=True)
# ignore = ['JP', '?', 'hendrick']
# for item in ignore:
# try:
# key_list.remove(item)
# except ValueError:
# pass
if verbose:
print('Found %d citations used in the document' %
(len(key_list), ))
data = key_list, inverse
cacher.save(data)
key_list, inverse = data
# else:
# key_list = None
unknown_pubkeys = []
debug_author = ub.argval('--debug-author', default=None)
# ./fix_bib.py --debug_author=Kappes
if verbose:
print('Fixing %d/%d bibtex entries' %
(len(key_list), len(bibtex_dict)))
# debug = True
debug = False
if debug_author is not None:
debug = False
known_keys = list(bibtex_dict.keys())
missing_keys = set(key_list) - set(known_keys)
if extra_dict is not None:
missing_keys.difference_update(set(extra_dict.keys()))
if missing_keys:
print('The library is missing keys found in tex files %s' %
(ub.repr2(missing_keys), ))
# Search for possible typos:
candidate_typos = {}
sedlines = []
for key in missing_keys:
candidates = ut.closet_words(key, known_keys, num=3, subset=True)
if len(candidates) > 1:
top = candidates[0]
if ut.edit_distance(key, top) == 1:
# "sed -i -e 's/{}/{}/g' *.tex".format(key, top)
import os
replpaths = ' '.join(
[relpath(p, os.getcwd()) for p in inverse[key]])
sedlines.append("sed -i -e 's/{}/{}/g' {}".format(
key, top, replpaths))
candidate_typos[key] = candidates
print('Cannot find key = %r' % (key, ))
print('Did you mean? %r' % (candidates, ))
print('Quick fixes')
print('\n'.join(sedlines))
# group by file
just = max([0] + list(map(len, missing_keys)))
missing_fpaths = [inverse[key] for key in missing_keys]
for fpath in sorted(set(ub.flatten(missing_fpaths))):
# ut.fix_embed_globals()
subkeys = [k for k in missing_keys if fpath in inverse[k]]
print('')
ut.cprint('--- Missing Keys ---', 'blue')
ut.cprint('fpath = %r' % (fpath, ), 'blue')
ut.cprint('{} | {}'.format('Missing'.ljust(just), 'Did you mean?'),
'blue')
for key in subkeys:
print('{} | {}'.format(ut.highlight_text(key.ljust(just), 'red'),
' '.join(candidate_typos[key])))
# for key in list(bibtex_dict.keys()):
if extra_dict is not None:
# Extra database takes precidence over regular
key_list = list(ut.unique(key_list + list(extra_dict.keys())))
for k, v in extra_dict.items():
bibtex_dict[k] = v
full = ub.argflag('--full')
for key in key_list:
try:
entry = bibtex_dict[key]
except KeyError:
continue
self = BibTexCleaner(key, entry, full=full)
if debug_author is not None:
debug = debug_author in entry.get('author', '')
if debug:
ut.cprint(' --- ENTRY ---', 'yellow')
print(ub.repr2(entry, nl=1))
entry = self.fix()
# self.clip_abstract()
# self.shorten_keys()
# self.fix_authors()
# self.fix_year()
# old_pubval = self.fix_pubkey()
# if old_pubval:
# unknown_pubkeys.append(old_pubval)
# self.fix_arxiv()
# self.fix_general()
# self.fix_paper_types()
if debug:
print(ub.repr2(entry, nl=1))
ut.cprint(' --- END ENTRY ---', 'yellow')
bibtex_dict[key] = entry
unwanted_keys = set(bibtex_dict.keys()) - set(key_list)
if verbose:
print('Removing unwanted %d entries' % (len(unwanted_keys)))
ut.delete_dict_keys(bibtex_dict, unwanted_keys)
if 0:
d1 = bibtex_dict.copy()
full = True
for key, entry in d1.items():
self = BibTexCleaner(key, entry, full=full)
pub = self.publication()
if pub is None:
print(self.entry['ENTRYTYPE'])
old = self.fix_pubkey()
x1 = self._pubval()
x2 = self.standard_pubval(full=full)
# if x2 is not None and len(x2) > 5:
# print(ub.repr2(self.entry))
if x1 != x2:
print('x2 = %r' % (x2, ))
print('x1 = %r' % (x1, ))
print(ub.repr2(self.entry))
# if 'CVPR' in self.entry.get('booktitle', ''):
# if 'CVPR' != self.entry.get('booktitle', ''):
# break
if old:
print('old = %r' % (old, ))
d1[key] = self.entry
if full:
d1 = bibtex_dict.copy()
import numpy as np
import pandas as pd
df = pd.DataFrame.from_dict(d1, orient='index')
paged_items = df[~pd.isnull(df['pub_accro'])]
has_pages = ~pd.isnull(paged_items['pages'])
print('have pages {} / {}'.format(has_pages.sum(), len(has_pages)))
print(ub.repr2(paged_items[~has_pages]['title'].values.tolist()))
entrytypes = dict(list(df.groupby('pub_type')))
if False:
# entrytypes['misc']
g = entrytypes['online']
g = g[g.columns[~np.all(pd.isnull(g), axis=0)]]
entrytypes['book']
entrytypes['thesis']
g = entrytypes['article']
g = entrytypes['incollection']
g = entrytypes['conference']
def lookup_pub(e):
if e == 'article':
return 'journal', 'journal'
elif e == 'incollection':
return 'booksection', 'booktitle'
elif e == 'conference':
return 'conference', 'booktitle'
return None, None
for e, g in entrytypes.items():
print('e = %r' % (e, ))
g = g[g.columns[~np.all(pd.isnull(g), axis=0)]]
if 'pub_full' in g.columns:
place_title = g['pub_full'].tolist()
print(ub.repr2(ub.dict_hist(place_title)))
else:
print('Unknown publications')
if 'report' in entrytypes:
g = entrytypes['report']
missing = g[pd.isnull(g['title'])]
if len(missing):
print('Missing Title')
print(ub.repr2(missing[['title', 'author']].values.tolist()))
if 'journal' in entrytypes:
g = entrytypes['journal']
g = g[g.columns[~np.all(pd.isnull(g), axis=0)]]
missing = g[pd.isnull(g['journal'])]
if len(missing):
print('Missing Journal')
print(ub.repr2(missing[['title', 'author']].values.tolist()))
if 'conference' in entrytypes:
g = entrytypes['conference']
g = g[g.columns[~np.all(pd.isnull(g), axis=0)]]
missing = g[pd.isnull(g['booktitle'])]
if len(missing):
print('Missing Booktitle')
print(ub.repr2(missing[['title', 'author']].values.tolist()))
if 'incollection' in entrytypes:
g = entrytypes['incollection']
g = g[g.columns[~np.all(pd.isnull(g), axis=0)]]
missing = g[pd.isnull(g['booktitle'])]
if len(missing):
print('Missing Booktitle')
print(ub.repr2(missing[['title', 'author']].values.tolist()))
if 'thesis' in entrytypes:
g = entrytypes['thesis']
g = g[g.columns[~np.all(pd.isnull(g), axis=0)]]
missing = g[pd.isnull(g['institution'])]
if len(missing):
print('Missing Institution')
print(ub.repr2(missing[['title', 'author']].values.tolist()))
# import utool
# utool.embed()
# Overwrite BibDatabase structure
bib_database._entries_dict = bibtex_dict
bib_database.entries = list(bibtex_dict.values())
#conftitle_to_types_set_hist = {key: set(val) for key, val in conftitle_to_types_hist.items()}
#print(ub.repr2(conftitle_to_types_set_hist))
print('Unknown conference keys:')
print(ub.repr2(sorted(unknown_pubkeys)))
print('len(unknown_pubkeys) = %r' % (len(unknown_pubkeys), ))
writer = BibTexWriter()
writer.contents = ['comments', 'entries']
writer.indent = ' '
writer.order_entries_by = ('type', 'author', 'year')
new_bibtex_str = bibtexparser.dumps(bib_database, writer)
# Need to check
#jegou_aggregating_2012
# Fix the Journal Abreviations
# References:
# https://www.ieee.org/documents/trans_journal_names.pdf
# Write out clean bibfile in ascii format
clean_bib_fpath = ub.augpath(bib_fpath.replace(' ', '_'), suffix='_clean')
if not ub.argflag('--dryrun'):
ut.writeto(clean_bib_fpath, new_bibtex_str)
'formatter': 'standard',
'class':'logging.StreamHandler',
},
},
'loggers': {
'': {
'handlers': ['default'],
'level': 'ERROR',
'formatter': 'standard',
'propagate': True
}
}
})
writer = BibTexWriter()
writer.contents = ['comments', 'entries']
writer.indent = ' '
writer.order_entries_by = ('ENTRYTYPE', 'author', 'year')
def create_id(t, year, title):
return str(t) + "_" + str(year) + "_" + str(space_to_underscore(title))
def pdf(pdf_files, shared_pdf, bibtex_folder, bibtex_files, gscholar):
for pdf in pdf_files:
txt = re.sub("\W", " ", gs.convert_pdf_to_txt(pdf)).lower()
#Research determined that the cutting of 35 words gives the
#highest accuracy
words = txt.strip().split()[:35]
words = " ".join(words)
print words
if gscholar == True:
def fix_conference_title_names(clean_text, key_list=None):
"""
mass bibtex fixes
CommandLine:
./fix_bib.py
"""
# Find citations from the tex documents
if key_list is None:
key_list = find_used_citations(testdata_fpaths())
key_list = list(set(key_list))
ignore = ['JP', '?']
for item in ignore:
try:
key_list.remove(item)
except ValueError:
pass
unknown_confkeys = []
conference_keys = [
'journal',
'booktitle',
]
ignore_confkey = []
bib_database = bibtexparser.loads(clean_text)
bibtex_dict = bib_database.get_entry_dict()
isect = set(ignore_confkey).intersection(
set(constants_tex_fixes.CONFERENCE_TITLE_MAPS.keys()))
assert len(isect) == 0, repr(isect)
#ut.embed()
#conftitle_to_types_hist = ut.ddict(list)
type_key = 'ENTRYTYPE'
debug_author = ut.get_argval('--debug-author', type_=str, default=None)
# ./fix_bib.py --debug_author=Kappes
for key in bibtex_dict.keys():
entry = bibtex_dict[key]
if debug_author is not None:
debug = debug_author in entry.get('author', '')
else:
debug = False
if debug:
print(' --- ENTRY ---')
print(ut.repr3(entry))
#if type_key not in entry:
# #entry[type_key] = entry['ENTRYTYPE']
# ut.embed()
# Clip abstrat
if 'abstract' in entry:
entry['abstract'] = ' '.join(entry['abstract'].split(' ')[0:7])
# Remove Keys
remove_keys = [
'note',
'urldate',
'series',
'publisher',
'isbn',
'editor',
'shorttitle',
'copyright',
'language',
'month',
# These will be put back in
#'number',
#'pages',
#'volume',
]
entry = ut.delete_dict_keys(entry, remove_keys)
# Fix conference names
confkeys = list(set(entry.keys()).intersection(set(conference_keys)))
#entry = ut.delete_dict_keys(entry, ['abstract'])
# TODO: FIX THESE IF NEEDBE
#if len(confkeys) == 0:
# print(ut.dict_str(entry))
# print(entry.keys())
if len(confkeys) == 1:
confkey = confkeys[0]
old_confval = entry[confkey]
# Remove curly braces
old_confval = old_confval.replace('{', '').replace('}', '')
if old_confval in ignore_confkey:
print(ut.dict_str(entry))
continue
new_confval_candiates = []
if old_confval.startswith('arXiv'):
continue
# for conf_title, patterns in constants_tex_fixes.CONFERENCE_TITLE_MAPS.items():
for conf in constants_tex_fixes.CONFERENCES:
if conf.matches(old_confval):
conf_title = conf.accro()
if debug:
print('old_confval = %r' % (old_confval, ))
print('conf_title = %r' % (conf_title, ))
new_confval = conf_title
new_confval_candiates.append(new_confval)
if len(new_confval_candiates) == 0:
new_confval = None
elif len(new_confval_candiates) == 1:
new_confval = new_confval_candiates[0]
else:
assert False, 'double match'
if new_confval is None:
if key in key_list:
unknown_confkeys.append(old_confval)
#print(old_confval)
else:
# Overwrite old confval
entry[confkey] = new_confval
# Record info about types of conferneces
true_confval = entry[confkey].replace('{', '').replace('}', '')
# FIX ENTRIES THAT SHOULD BE CONFERENCES
if true_confval in constants_tex_fixes.CONFERENCE_LIST:
if entry[type_key] == 'inproceedings':
pass
#print(confkey)
#print(ut.dict_str(entry))
elif entry[type_key] == 'article':
entry['booktitle'] = entry['journal']
del entry['journal']
#print(ut.dict_str(entry))
elif entry[type_key] == 'incollection':
pass
else:
raise AssertionError('UNKNOWN TYPE: %r' %
(entry[type_key], ))
if 'booktitle' not in entry:
print('DOES NOT HAVE CORRECT CONFERENCE KEY')
print(ut.dict_str(entry))
assert 'journal' not in entry, 'should not have journal'
#print(entry['type'])
entry[type_key] = 'inproceedings'
# FIX ENTRIES THAT SHOULD BE JOURNALS
if true_confval in constants_tex_fixes.JOURNAL_LIST:
if entry[type_key] == 'article':
pass
elif entry[type_key] == 'inproceedings':
pass
#print(ut.dict_str(entry))
elif entry[type_key] == 'incollection':
pass
else:
raise AssertionError('UNKNOWN TYPE: %r' %
(entry['type'], ))
if 'journal' not in entry:
print('DOES NOT HAVE CORRECT CONFERENCE KEY')
print(ut.dict_str(entry))
assert 'booktitle' not in entry, 'should not have booktitle'
#print(entry['type'])
#entry['type'] = 'article'
#conftitle_to_types_hist[true_confval].append(entry['type'])
elif len(confkeys) > 1:
raise AssertionError('more than one confkey=%r' % (confkeys, ))
# Fix Authors
if 'author' in entry:
authors = six.text_type(entry['author'])
for truename, alias_list in constants_tex_fixes.AUTHOR_NAME_MAPS.items(
):
pattern = six.text_type(
ut.regex_or([
ut.util_regex.whole_word(alias) for alias in alias_list
]))
authors = re.sub(pattern,
six.text_type(truename),
authors,
flags=re.UNICODE)
entry['author'] = authors
"""
article = journal
inprocedings = converence paper
"""
#conftitle_to_types_set_hist = {key: set(val) for key, val in conftitle_to_types_hist.items()}
#print(ut.dict_str(conftitle_to_types_set_hist))
print(ut.list_str(sorted(unknown_confkeys)))
print('len(unknown_confkeys) = %r' % (len(unknown_confkeys), ))
writer = BibTexWriter()
writer.contents = ['comments', 'entries']
writer.indent = ' '
writer.order_entries_by = ('type', 'author', 'year')
new_bibtex_str = bibtexparser.dumps(bib_database, writer)
return new_bibtex_str
folder = sys.argv[1] if len(sys.argv) > 1 else "bib"
if os.path.exists(folder + '-clean'):
print 'cleaning ' + folder + '-clean/'
for file in os.listdir(folder + '-clean'):
try:
if os.path.isfile(folder + '-clean/' + file):
os.unlink(folder + '-clean/' + file)
except Exception as e:
print(e)
else:
os.makedirs(folder + '-clean')
#Writer customization
writer = BibTexWriter()
writer.contents = ['entries']
writer.indent = ' '
writer.order_entries_by = ('ENTRYTYPE', 'author', 'year')
#parser customization, need a new parser for each file
#parser = BibTexParser()
#parser.common_strings = True
#Bib dictionary for months
Months = """@STRING{ jan = "jan"}
@STRING{ feb = "feb"}
@STRING{ mar = "mar"}
@STRING{ apr = "apr"}
@STRING{ may = "may"}
@STRING{ jun = "jun"}
@STRING{ jul = "jul"}
folder=sys.argv[1] if len(sys.argv) > 1 else "bib"
if os.path.exists(folder+'-clean'):
print 'cleaning '+folder+'-clean/'
for file in os.listdir(folder+'-clean'):
try:
if os.path.isfile(folder+'-clean/'+file):
os.unlink(folder+'-clean/'+file)
except Exception as e:
print(e)
else:
os.makedirs(folder+'-clean')
#Writer customization
writer = BibTexWriter()
writer.contents = ['entries']
writer.indent = ' '
writer.order_entries_by = ('ENTRYTYPE', 'author', 'year')
#parser customization, need a new parser for each file
#parser = BibTexParser()
#parser.common_strings = True
#Bib dictionary for months
Months = """@STRING{ jan = "jan"}
@STRING{ feb = "feb"}
@STRING{ mar = "mar"}
@STRING{ apr = "apr"}
@STRING{ may = "may"}
@STRING{ jun = "jun"}
@STRING{ jul = "jul"}