def test_load():
assy_hvm = brainio_collection.get_assembly(
identifier="dicarlo.MajajHong2015.public")
assert assy_hvm.shape == (256, 148480, 1)
print(assy_hvm)
def test_getitem():
assy_hvm = brainio_collection.get_assembly(
identifier="dicarlo.MajajHong2015.public")
single = assy_hvm[0, 0, 0]
assert type(single) is type(assy_hvm)
def test_existence(assembly_identifier):
assert brainio_collection.get_assembly(assembly_identifier) is not None
def test_nr_assembly_ctor():
assy_hvm = brainio_collection.get_assembly(
identifier="dicarlo.MajajHong2015.public")
assert isinstance(assy_hvm, DataAssembly)
def test_BashivanKar2019(assembly, shape, nans):
assy = brainio_collection.get_assembly(assembly)
assert assy.shape == shape
assert np.count_nonzero(np.isnan(assy)) == nans
def test_coords(self):
assembly = brainio_collection.get_assembly('dicarlo.Rust2012.array')
assert len(set(assembly['image_id'].values)) == 300
assert len(set(assembly['neuroid_id'].values)) == 296
assert len(set(assembly['animal'].values)) == 2
assert len(set(assembly['region'].values)) == 2
def test_content(self):
assembly = brainio_collection.get_assembly('dicarlo.Seibert2019')
assert np.count_nonzero(np.isnan(assembly)) == 19118720
assert assembly.stimulus_set_identifier == "dicarlo.hvm"
hvm = assembly.stimulus_set
assert hvm.shape == (5760, 18)
def test_nonzero(self, identifier):
assembly = brainio_collection.get_assembly(identifier)
nonzero = np.count_nonzero(assembly)
assert nonzero > 0
def test_synthetic(assembly, shape, nans):
assy = brainio_collection.get_assembly(assembly)
assert assy.shape == shape
assert np.count_nonzero(np.isnan(assy)) == nans
