def test_job_submit(self):
HEADING()
xmkdir(self.manager, "~/scripts/test")
self.pbs.jobid_incr()
banner('qsub')
jobname = "job-" + self.pbs.jobid + ".pbs"
print(jobname)
print (self.host)
script_template = self.pbs.read_script("etc/job.pbs")
r = self.pbs.qsub(jobname, self.host, 'echo "Hello"', template=script_template)
pprint(r)
#banner('variable list')
#pprint(self.pbs.variable_list(r))
assert len(r.keys()) == 1
banner('status')
jobid = self.pbs.getid(r)
print (jobid)
r = self.pbs.jobstatus(self.host, jobid)
print(r)
def qsub(self, name, host, script, template=None, kind="dict"):
"""
Executes the qsub command on a given host.
NOTE this method may not yet be fully implemented
:param name: name of the script
:param host: host on which the script is to be run
:param script: The name of the script
:param template: The script is wrapped into a template
:param kind: The return is passed as dict, yaml, xml
:return:
"""
self.jobid_incr()
jobscript = self.create_script(name, script, template)
# copy the script to the remote host
self._write_to_file(jobscript, name)
# copy script to remote host
remote_path = self.data.get("cloudmesh", "pbs", host, "scripts")
print(remote_path)
xmkdir(host, remote_path)
manager_host = self.manager(host)
# call qsub on the remot host
r = Shell.scp(name, manager_host + ":" + remote_path)
jobid = Shell.ssh(manager_host,
"qsub {0}/{1}".format(remote_path, name)).rstrip()
return self.jobstatus(host, jobid, kind=kind)
def test_job_submit(self):
HEADING()
xmkdir(self.manager, "~/scripts/test")
self.pbs.jobid_incr()
banner('qsub')
jobname = "job-" + self.pbs.jobid + ".pbs"
print(jobname)
print(self.host)
script_template = self.pbs.read_script("etc/job.pbs")
r = self.pbs.qsub(jobname,
self.host,
'echo "Hello"',
template=script_template)
pprint(r)
#banner('variable list')
#pprint(self.pbs.variable_list(r))
assert len(r.keys()) == 1
banner('status')
jobid = self.pbs.getid(r)
print(jobid)
r = self.pbs.jobstatus(self.host, jobid)
print(r)
def qsub(self, name, host, script, template=None, kind="dict"):
"""
Executes the qsub command on a given host.
NOTE this method may not yet be fully implemented
:param name: name of the script
:param host: host on which the script is to be run
:param script: The name of the script
:param template: The script is wrapped into a template
:param kind: The return is passed as dict, yaml, xml
:return:
"""
self.jobid_incr()
jobscript = self.create_script(name, script, template)
# copy the script to the remote host
self._write_to_file(jobscript, name)
# copy script to remote host
remote_path = self.data.get("cloudmesh", "pbs", host, "scripts")
print(remote_path)
xmkdir(host, remote_path)
manager_host = self.manager(host)
# call qsub on the remot host
r = Shell.scp(name, manager_host + ":" + remote_path)
jobid = Shell.ssh(manager_host, "qsub {0}/{1}".format(remote_path, name)).rstrip()
return self.jobstatus(host, jobid, kind=kind)
def test_generate_script(self):
HEADING()
banner("Create Dir")
xmkdir(self.manager, "~/scripts/test")
assert self.pbs.data.get("cloudmesh.pbs.{0}.manager".format(self.host))
script_template = self.pbs.read_script("etc/job.pbs")
jobname = "job-" + self.pbs.jobid
job_script = self.pbs.create_script(jobname, self.script, script_template)
print(job_script)
assert "uname" in job_script
def test_generate_script(self):
HEADING()
banner("Create Dir")
xmkdir(self.manager, "~/scripts/test")
assert self.pbs.data.get("cloudmesh.pbs.{0}.manager".format(self.host))
script_template = self.pbs.read_script("etc/job.pbs")
jobname = "job-" + self.pbs.jobid
job_script = self.pbs.create_script(jobname, self.script,
script_template)
print(job_script)
assert "uname" in job_script
pbs = OpenPBS(deploy=True)
manager = pbs.manager(host)
pprint(pbs.nodes(host))
pprint(pbs.nodes_distribution(host))
pprint(pbs.nodes_sum(host))
sys.exit()
pbs.info()
manager = pbs.manager(host)
xmkdir(manager, "~/scripts/test")
print(pbs)
script_template = pbs.read_script("etc/job.pbs")
print(script_template)
script = """
uname -a
"""
jobname = "job-" + pbs.jobid
job_script = pbs.create_script(jobname, script, script_template)
print(job_script)
pbs = OpenPBS(deploy=True)
manager = pbs.manager(host)
pprint(pbs.nodes(host))
pprint(pbs.nodes_distribution(host))
pprint(pbs.nodes_sum(host))
sys.exit()
pbs.info()
manager = pbs.manager(host)
xmkdir(manager, "~/scripts/test")
print(pbs)
script_template = pbs.read_script("etc/job.pbs")
print(script_template)
script = """
uname -a
"""
jobname = "job-" + pbs.jobid
job_script = pbs.create_script(jobname, script, script_template)
print(job_script)
