def build_matlab():
"""Builds MATLAB example in build/matlab/ but not the one in examples/."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_matlab.c'], 'code-experiments/build/matlab/coco.c',
release, {"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'], verbose=verbosity)
def build_matlab():
"""Builds MATLAB example in build/matlab/ but not the one in examples/."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_matlab.c'], 'code-experiments/build/matlab/coco.c',
release, {"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'], verbose=verbosity)
def _prep_python():
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/python/cython/coco.c',
release, {"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/python/cython/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
copy_file('code-experiments/src/bbob2009_testcases.txt', 'code-experiments/build/python/bbob2009_testcases.txt')
copy_file('code-experiments/src/bbob2009_testcases2.txt', 'code-experiments/build/python/bbob2009_testcases2.txt')
copy_file('code-experiments/build/python/README.md', 'code-experiments/build/python/README.txt')
expand_file('code-experiments/build/python/setup.py.in', 'code-experiments/build/python/setup.py',
{'COCO_VERSION': git_version(pep440=True)}) # hg_version()})
def _prep_python():
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/python/cython/coco.c',
release, {"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/python/cython/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
copy_file('code-experiments/src/bbob2009_testcases.txt', 'code-experiments/build/python/bbob2009_testcases.txt')
copy_file('code-experiments/src/bbob2009_testcases2.txt', 'code-experiments/build/python/bbob2009_testcases2.txt')
copy_file('code-experiments/build/python/README.md', 'code-experiments/build/python/README.txt')
expand_file('code-experiments/build/python/setup.py.in', 'code-experiments/build/python/setup.py',
{'COCO_VERSION': git_version(pep440=True)}) # hg_version()})
def install_preprocessing():
global release
expand_file(join('code-preprocessing/archive-update', 'setup.py.in'),
join('code-preprocessing/archive-update', 'setup.py'),
{'COCO_VERSION': git_version(pep440=True)})
build_python()
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
'code-preprocessing/archive-update/interface/coco.c', release,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-preprocessing/archive-update/interface/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
python('code-preprocessing/archive-update', ['setup.py', 'install', '--user'], verbose=verbosity)
def install_preprocessing():
global release
expand_file(join('code-preprocessing/archive-update', 'setup.py.in'),
join('code-preprocessing/archive-update', 'setup.py'),
{'COCO_VERSION': git_version(pep440=True)})
build_python()
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
'code-preprocessing/archive-update/interface/coco.c', release,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-preprocessing/archive-update/interface/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
python('code-preprocessing/archive-update', ['setup.py', 'install', '--user'], verbose=verbosity)
def _prep_python():
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/python/cython/coco.c',
release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/python/cython/coco.h')
copy_file('code-experiments/src/best_values_hyp.txt', 'code-experiments/build/python/best_values_hyp.txt')
copy_file('code-experiments/src/bbob2009_testcases.txt', 'code-experiments/build/python/bbob2009_testcases.txt')
expand_file('code-experiments/build/python/README.in', 'code-experiments/build/python/README',
{'COCO_VERSION': git_version()}) # hg_version()})
expand_file('code-experiments/build/python/setup.py.in', 'code-experiments/build/python/setup.py',
{'COCO_VERSION': git_version()}) # hg_version()})
if 'darwin' in sys.platform:
run('code-experiments/build/python/cython', ['cython', 'interface.pyx'])
def _prep_python():
global RELEASE
amalgamate(CORE_FILES + ['code-experiments/src/IOHprofiler_runtime_c.c'],
'code-experiments/build/python/cython/IOHprofiler.c',
RELEASE, {"IOHprofiler_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/IOHprofiler.h',
'code-experiments/build/python/cython/IOHprofiler.h',
{'IOHprofiler_VERSION': git_version(pep440=True)})
copy_file('code-experiments/build/python/README.md',
'code-experiments/build/python/README.txt')
expand_file('code-experiments/build/python/setup.py.in',
'code-experiments/build/python/setup.py',
{'IOHprofiler_VERSION': git_version(pep440=True)}) # hg_version()})
def install_preprocessing(package_install_option = []):
global RELEASE
expand_file(join('code-preprocessing/archive-update', 'setup.py.in'),
join('code-preprocessing/archive-update', 'setup.py'),
{'COCO_VERSION': git_version(pep440=True)})
build_python(package_install_option = package_install_option)
amalgamate(CORE_FILES + ['code-experiments/src/coco_runtime_c.c'],
'code-preprocessing/archive-update/interface/coco.c', RELEASE,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-preprocessing/archive-update/interface/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
python('code-preprocessing/archive-update',
['setup.py', 'install'] + package_install_option,
verbose=_verbosity, custom_exception_handler=install_error)
def build_matlab_sms():
global release
join = os.path.join
source_folder = join('code-experiments', 'build', 'matlab')
destination_folder = join('code-experiments', 'examples',
'bbob-biobj-matlab-smsemoa')
# amalgamate and copy files
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
join(destination_folder, 'coco.c'), release)
copy_file('code-experiments/src/coco.h', 'code-experiments/examples/bbob-biobj-matlab-smsemoa/coco.h')
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
files = ['cocoEvaluateFunction.c',
'cocoObserver.c',
'cocoObserverFree.c',
'cocoProblemGetDimension.c',
'cocoProblemGetEvaluations.c',
'cocoProblemGetId.c',
'cocoProblemGetLargestValuesOfInterest.c',
'cocoProblemGetName.c',
'cocoProblemGetNumberOfObjectives.c',
'cocoProblemGetSmallestValuesOfInterest.c',
'cocoProblemIsValid.c',
'cocoSuite.c',
'cocoSuiteFree.c',
'cocoSuiteGetNextProblem.c']
for file in files:
copy_file(join(source_folder, file),
join(destination_folder, file))
# compile
run('code-experiments/examples/bbob-biobj-matlab-smsemoa', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def install_postprocessing():
global release
expand_file(join('code-postprocessing', 'setup.py.in'),
join('code-postprocessing', 'setup.py'),
{'COCO_VERSION': git_version(pep440=True)})
# copy_tree('code-postprocessing/latex-templates', 'code-postprocessing/cocopp/latex-templates')
python('code-postprocessing', ['setup.py', 'install', '--user'], verbose=verbosity)
def build_c():
""" Builds the C source code """
global RELEASE
amalgamate(CORE_FILES + ['code-experiments/src/profiler/IOHprofiler_runtime_c.c'],
'code-experiments/build/c/IOHprofiler.c', RELEASE,
{"IOHprofiler_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/profiler/IOHprofiler.h', 'code-experiments/build/c/profiler/IOHprofiler.h',
{"IOHprofiler_VERSION": git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/c/REVISION")
write_file(git_version(), "code-experiments/build/c/VERSION")
if 11 < 3:
python('code-experiments/build/c', ['make.py', 'clean'], verbose=_verbosity)
python('code-experiments/build/c', ['make.py', 'all'], verbose=_verbosity)
else:
make("code-experiments/build/c", "clean", verbose=_verbosity)
make("code-experiments/build/c", "all", verbose=_verbosity)
def build_c_unit_tests():
""" Builds unit tests in C """
copy_file('code-experiments/build/c/coco.c', 'code-experiments/test/unit-test/coco.c')
expand_file('code-experiments/src/coco.h', 'code-experiments/test/unit-test/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
make("code-experiments/test/unit-test", "clean", verbose=_build_verbosity)
make("code-experiments/test/unit-test", "all", verbose=_build_verbosity)
def build_c_unit_tests():
""" Builds unit tests in C """
libraryPath = '';
fileName = ''
if ('win32' in sys.platform):
fileName = 'cmocka.dll'
if '64' in platform.machine():
libraryPath = 'code-experiments/test/unit-test/lib/win64'
elif ('32' in platform.machine()) or ('x86' in platform.machine()):
if 'cygwin' in os.environ['PATH']:
libraryPath = 'code-experiments/test/unit-test/lib/win32_cygwin'
else:
libraryPath = 'code-experiments/test/unit-test/lib/win32_mingw'
elif ('linux' in sys.platform):
fileName = 'libcmocka.so'
if 'Ubuntu' in platform.linux_distribution():
libraryPath = 'code-experiments/test/unit-test/lib/linux_ubuntu'
elif 'Fedora' in platform.linux_distribution():
libraryPath = 'code-experiments/test/unit-test/lib/linux_fedora'
elif ('darwin' in sys.platform): # Mac
libraryPath = 'code-experiments/test/unit-test/lib/macosx'
fileName = 'libcmocka.dylib'
if (len(libraryPath) > 0):
copy_file(os.path.join(libraryPath, fileName),
os.path.join('code-experiments/test/unit-test', fileName))
copy_file('code-experiments/build/c/coco.c', 'code-experiments/test/unit-test/coco.c')
expand_file('code-experiments/src/coco.h', 'code-experiments/test/unit-test/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
make("code-experiments/test/unit-test", "clean", verbose=verbosity)
make("code-experiments/test/unit-test", "all", verbose=verbosity)
def install_postprocessing():
global release
expand_file(join('code-postprocessing', 'setup.py.in'),
join('code-postprocessing', 'setup.py'),
{'COCO_VERSION': git_version(pep440=True)})
# copy_tree('code-postprocessing/latex-templates', 'code-postprocessing/bbob_pproc/latex-templates')
python('code-postprocessing', ['setup.py', 'install', '--user'])
def build_c_unit_tests():
""" Builds unit tests in C """
library_path = 'code-experiments/test/unit-test/lib'
library_dir = ''
file_name = ''
if 'win32' in sys.platform:
file_name = 'cmocka.dll'
if '64' in platform.machine():
library_dir = 'win64'
elif ('32' in platform.machine()) or ('x86' in platform.machine()):
if 'cygwin' in os.environ['PATH']:
library_dir = 'win32_cygwin'
else:
library_dir = 'win32_mingw'
elif 'linux' in sys.platform:
file_name = 'libcmocka.so'
if 'Ubuntu' in platform.linux_distribution():
library_dir = 'linux_ubuntu'
elif 'Fedora' in platform.linux_distribution():
library_dir = 'linux_fedora'
elif 'darwin' in sys.platform: # Mac
library_dir = 'macosx'
file_name = 'libcmocka.dylib'
if len(library_dir) > 0:
copy_file(os.path.join(library_path, library_dir, file_name),
os.path.join('code-experiments/test/unit-test', file_name))
copy_file('code-experiments/build/c/coco.c', 'code-experiments/test/unit-test/coco.c')
expand_file('code-experiments/src/coco.h', 'code-experiments/test/unit-test/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
make("code-experiments/test/unit-test", "clean", verbose=_build_verbosity)
make("code-experiments/test/unit-test", "all", verbose=_build_verbosity)
def build_matlab():
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_r.c'], 'code-experiments/build/matlab/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h')
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['octave', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def build_matlab_sms():
"""Builds the SMS-EMOA in MATLAB """
global RELEASE
destination_folder = 'code-experiments/examples/bbob-biobj-matlab-smsemoa'
# amalgamate and copy files
amalgamate(CORE_FILES + ['code-experiments/src/coco_runtime_matlab.c'],
join(destination_folder, 'coco.c'), RELEASE,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', join(destination_folder, 'coco.h'),
{'COCO_VERSION': git_version(pep440=True)})
for f in MATLAB_FILES:
copy_file(join('code-experiments/build/matlab/', f), join(destination_folder, f))
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
copy_file('code-experiments/build/matlab/cocoCall.c', join(destination_folder, 'cocoCall.c'))
# compile
run(destination_folder, ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def build_octave():
"""Builds example in build/matlab/ with GNU Octave."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
'code-experiments/build/matlab/coco.c', release,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
# make sure that under Windows, run_octave has been run at least once
# before to provide the necessary octave_coco.bat file
if ('win32' in sys.platform):
run('code-experiments/build/matlab', ['octave_coco.bat', '--no-gui', 'setup.m'], verbose=verbosity)
else:
run('code-experiments/build/matlab', ['octave', '--no-gui', 'setup.m'], verbose=verbosity)
def build_octave():
"""Builds example in build/matlab/ with GNU Octave but not the one in examples/."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/matlab/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h')
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['octave', '--no-gui', 'setup.m'])
def build_matlab():
"""Builds MATLAB example in build/matlab/ but not the one in examples/."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_matlab.c'], 'code-experiments/build/matlab/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h')
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
run('code-experiments/build/matlab', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def build_c():
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/c/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/c/coco.h')
copy_file('code-experiments/src/best_values_hyp.txt', 'code-experiments/build/c/best_values_hyp.txt')
write_file(git_revision(), "code-experiments/build/c/REVISION")
write_file(git_version(), "code-experiments/build/c/VERSION")
make("code-experiments/build/c", "clean")
make("code-experiments/build/c", "all")
def build_c():
""" Builds the C source code """
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/c/coco.c', release,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/c/coco.h',
{"COCO_VERSION": git_version(pep440=True)})
copy_file('code-experiments/build/c/coco.c', 'code-experiments/examples/bbob2009-c-cmaes/coco.c')
expand_file('code-experiments/build/c/coco.h', 'code-experiments/examples/bbob2009-c-cmaes/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/c/REVISION")
write_file(git_version(), "code-experiments/build/c/VERSION")
if 11 < 3:
python('code-experiments/build/c', ['make.py', 'clean'], verbose=verbosity)
python('code-experiments/build/c', ['make.py', 'all'], verbose=verbosity)
else:
make("code-experiments/build/c", "clean", verbose=verbosity)
make("code-experiments/build/c", "all", verbose=verbosity)
def build_c():
""" Builds the C source code """
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/c/coco.c', release,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/c/coco.h',
{"COCO_VERSION": git_version(pep440=True)})
copy_file('code-experiments/build/c/coco.c', 'code-experiments/examples/bbob2009-c-cmaes/coco.c')
expand_file('code-experiments/build/c/coco.h', 'code-experiments/examples/bbob2009-c-cmaes/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/c/REVISION")
write_file(git_version(), "code-experiments/build/c/VERSION")
if 11 < 3:
python('code-experiments/build/c', ['make.py', 'clean'], verbose=verbosity)
python('code-experiments/build/c', ['make.py', 'all'], verbose=verbosity)
else:
make("code-experiments/build/c", "clean", verbose=verbosity)
make("code-experiments/build/c", "all", verbose=verbosity)
def build_matlab_sms():
"""Builds the SMS-EMOA in MATLAB """
global release
join = os.path.join
destination_folder = 'code-experiments/examples/bbob-biobj-matlab-smsemoa'
# amalgamate and copy files
amalgamate(core_files + ['code-experiments/src/coco_runtime_matlab.c'],
join(destination_folder, 'coco.c'), release,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', join(destination_folder, 'coco.h'),
{'COCO_VERSION': git_version(pep440=True)})
for f in matlab_files:
copy_file(join('code-experiments/build/matlab/', f), join(destination_folder, f))
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
copy_file('code-experiments/build/matlab/cocoCall.c', join(destination_folder, 'cocoCall.c'))
# compile
run(destination_folder, ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def install_postprocessing():
''' Installs the COCO postprocessing as python module. '''
global RELEASE
expand_file(join('code-postprocessing', 'setup.py.in'),
join('code-postprocessing', 'setup.py'),
{'COCO_VERSION': git_version(pep440=True)})
# copy_tree('code-postprocessing/latex-templates', 'code-postprocessing/cocopp/latex-templates')
python('code-postprocessing', ['setup.py', 'install', '--user'],
verbose=_verbosity)
def build_octave():
"""Builds example in build/matlab/ with GNU Octave."""
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
'code-experiments/build/matlab/coco.c', release,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/matlab/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/matlab/REVISION")
write_file(git_version(), "code-experiments/build/matlab/VERSION")
# make sure that under Windows, run_octave has been run at least once
# before to provide the necessary octave_coco.bat file
if ('win32' in sys.platform):
run('code-experiments/build/matlab', ['octave_coco.bat', '--no-gui', 'setup.m'], verbose=verbosity)
else:
run('code-experiments/build/matlab', ['octave', '--no-gui', 'setup.m'], verbose=verbosity)
def install_postprocessing(package_install_option = []):
''' Installs the COCO postprocessing as python module. '''
global RELEASE
expand_file(join('code-postprocessing', 'setup.py.in'),
join('code-postprocessing', 'setup.py'),
{'COCO_VERSION': git_version(pep440=True)})
# copy_tree('code-postprocessing/latex-templates', 'code-postprocessing/cocopp/latex-templates')
python('code-postprocessing', ['setup.py', 'install']
+ package_install_option, verbose=_verbosity,
custom_exception_handler=install_error)
def build_c_integration_tests():
""" Builds integration tests in C """
copy_file('code-experiments/build/c/coco.c', 'code-experiments/test/integration-test/coco.c')
expand_file('code-experiments/src/coco.h', 'code-experiments/test/integration-test/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
copy_file('code-experiments/src/bbob2009_testcases.txt',
'code-experiments/test/integration-test/bbob2009_testcases.txt')
copy_file('code-experiments/src/bbob2009_testcases2.txt',
'code-experiments/test/integration-test/bbob2009_testcases2.txt')
make("code-experiments/test/integration-test", "clean", verbose=verbosity)
make("code-experiments/test/integration-test", "all", verbose=verbosity)
def build_c():
""" Builds the C source code """
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/c/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/c/coco.h')
copy_file('code-experiments/build/c/coco.c', 'code-experiments/examples/bbob2009-c-cmaes/coco.c')
copy_file('code-experiments/build/c/coco.h', 'code-experiments/examples/bbob2009-c-cmaes/coco.h')
write_file(git_revision(), "code-experiments/build/c/REVISION")
write_file(git_version(), "code-experiments/build/c/VERSION")
make("code-experiments/build/c", "clean")
make("code-experiments/build/c", "all")
def build_octave_sms():
"""Builds the SMS-EMOA in Octave """
global RELEASE
destination_folder = 'code-experiments/examples/bbob-biobj-matlab-smsemoa'
# amalgamate and copy files
amalgamate(CORE_FILES + ['code-experiments/src/coco_runtime_c.c'],
join(destination_folder, 'coco.c'), RELEASE,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', join(destination_folder, 'coco.h'),
{'COCO_VERSION': git_version(pep440=True)})
for f in MATLAB_FILES:
copy_file(join('code-experiments/build/matlab/', f), join(destination_folder, f))
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
copy_file('code-experiments/build/matlab/cocoCall.c', join(destination_folder, 'cocoCall.c'))
# compile
if 'win32' in sys.platform:
run(destination_folder, ['octave_coco.bat', '--no-gui', 'setup.m'])
else:
run(destination_folder, ['octave', '--no-gui', 'setup.m'])
def build_c_integration_tests():
""" Builds integration tests in C """
copy_file('code-experiments/build/c/coco.c',
'code-experiments/test/integration-test/coco.c')
expand_file('code-experiments/src/coco.h',
'code-experiments/test/integration-test/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
copy_file('code-experiments/src/bbob2009_testcases.txt', 'code-experiments/test/integration-test/bbob2009_testcases.txt')
copy_file('code-experiments/src/bbob2009_testcases2.txt', 'code-experiments/test/integration-test/bbob2009_testcases2.txt')
make("code-experiments/test/integration-test", "clean", verbose=_build_verbosity)
make("code-experiments/test/integration-test", "all", verbose=_build_verbosity)
def build_octave_sms():
"""Builds the SMS-EMOA in Octave """
global release
join = os.path.join
destination_folder = 'code-experiments/examples/bbob-biobj-matlab-smsemoa'
# amalgamate and copy files
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
join(destination_folder, 'coco.c'), release,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', join(destination_folder, 'coco.h'),
{'COCO_VERSION': git_version(pep440=True)})
for f in matlab_files:
copy_file(join('code-experiments/build/matlab/', f), join(destination_folder, f))
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
copy_file('code-experiments/build/matlab/cocoCall.c', join(destination_folder, 'cocoCall.c'))
# compile
if ('win32' in sys.platform):
run(destination_folder, ['octave_coco.bat', '--no-gui', 'setup.m'])
else:
run(destination_folder, ['octave', '--no-gui', 'setup.m'])
def build_c_example_tests():
""" Builds an example experiment test in C """
if os.path.exists('code-experiments/test/example-test'):
shutil.rmtree('code-experiments/test/example-test')
time.sleep(1) # Needed to avoid permission errors for os.makedirs
os.makedirs('code-experiments/test/example-test')
copy_file('code-experiments/build/c/coco.c', 'code-experiments/test/example-test/coco.c')
expand_file('code-experiments/src/coco.h', 'code-experiments/test/example-test/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
copy_file('code-experiments/build/c/example_experiment.c',
'code-experiments/test/example-test/example_experiment.c')
copy_file('code-experiments/build/c/Makefile.in', 'code-experiments/test/example-test/Makefile.in')
copy_file('code-experiments/build/c/Makefile_win_gcc.in', 'code-experiments/test/example-test/Makefile_win_gcc.in')
make("code-experiments/test/example-test", "clean", verbose=verbosity)
make("code-experiments/test/example-test", "all", verbose=verbosity)
def build_c_example_tests():
""" Builds an example experiment test in C """
if os.path.exists('code-experiments/test/example-test'):
shutil.rmtree('code-experiments/test/example-test')
time.sleep(1) # Needed to avoid permission errors for os.makedirs
os.makedirs('code-experiments/test/example-test')
copy_file('code-experiments/build/c/coco.c', 'code-experiments/test/example-test/coco.c')
expand_file('code-experiments/src/coco.h', 'code-experiments/test/example-test/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
copy_file('code-experiments/build/c/example_experiment.c',
'code-experiments/test/example-test/example_experiment.c')
copy_file('code-experiments/build/c/Makefile.in', 'code-experiments/test/example-test/Makefile.in')
copy_file('code-experiments/build/c/Makefile_win_gcc.in', 'code-experiments/test/example-test/Makefile_win_gcc.in')
make("code-experiments/test/example-test", "clean", verbose=verbosity)
make("code-experiments/test/example-test", "all", verbose=verbosity)
def build_matlab_sms():
global release
join = os.path.join
source_folder = join('code-experiments', 'build', 'matlab')
destination_folder = join('code-experiments', 'examples',
'bbob-biobj-matlab-smsemoa')
# amalgamate and copy files
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'],
join(destination_folder, 'coco.c'), release)
copy_file('code-experiments/src/coco.h', 'code-experiments/examples/bbob-biobj-matlab-smsemoa/coco.h')
write_file(git_revision(), join(destination_folder, "REVISION"))
write_file(git_version(), join(destination_folder, "VERSION"))
for file in matlab_octave_wrapper_files:
copy_file(join(source_folder, file),
join(destination_folder, file))
# compile
run('code-experiments/examples/bbob-biobj-matlab-smsemoa', ['matlab', '-nodisplay', '-nosplash', '-r', 'setup, exit'])
def help():
print("""IOHprofiler framework bootstrap tool. Version %s
Usage: do.py <command> <arguments>
Available commands for users:
build-c - Build C module
build-python - Build Python modules
run-c - Build and run example experiment in C
run-python - Build and run example experiment in Python
Available commands for developers:
build - Build C and Python modules
run - Run example experiments in C and Python
""" % git_version(pep440=True))
def build_java():
""" Builds the example experiment in Java """
global release
amalgamate(core_files + ['code-experiments/src/coco_runtime_c.c'], 'code-experiments/build/java/coco.c', release)
copy_file('code-experiments/src/coco.h', 'code-experiments/build/java/coco.h')
write_file(git_revision(), "code-experiments/build/java/REVISION")
write_file(git_version(), "code-experiments/build/java/VERSION")
run('code-experiments/build/java', ['javac', 'CocoJNI.java'])
run('code-experiments/build/java', ['javah', 'CocoJNI'])
# Finds the path to the headers jni.h and jni_md.h (platform-dependent)
# and compiles the CocoJNI library (compiler-dependent). So far, only
# the following cases are covered:
# 1. Windows with Cygwin (both 64-bit)
# Note that 'win32' stands for both Windows 32-bit and 64-bit.
# Since platform 'cygwin' does not work as expected, we need to look for it in the PATH.
if ('win32' in sys.platform) and ('cygwin' in os.environ['PATH']):
jdkpath = check_output(['where', 'javac'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkpath1 = jdkpath.split("bin")[0] + 'include'
jdkpath2 = jdkpath1 + '\\win32'
if ('64' in platform.machine()):
run('code-experiments/build/java', ['x86_64-w64-mingw32-gcc', '-I', jdkpath1, '-I',
jdkpath2, '-shared', '-o', 'CocoJNI.dll',
'CocoJNI.c'])
# 2. Windows with Cygwin (both 32-bit)
elif ('32' in platform.machine()) or ('x86' in platform.machine()):
run('code-experiments/build/java', ['i686-w64-mingw32-gcc', '-Wl,--kill-at', '-I',
jdkpath1, '-I', jdkpath2, '-shared', '-o',
'CocoJNI.dll', 'CocoJNI.c'])
# 3. Windows without Cygwin
elif ('win32' in sys.platform) and ('cygwin' not in os.environ['PATH']):
jdkpath = check_output(['where', 'javac'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkpath1 = jdkpath.split("bin")[0] + 'include'
jdkpath2 = jdkpath1 + '\\win32'
run('code-experiments/build/java', ['gcc', '-Wl,--kill-at', '-I', jdkpath1, '-I', jdkpath2,
'-shared', '-o', 'CocoJNI.dll', 'CocoJNI.c'])
# 4. Linux
elif ('linux' in sys.platform):
jdkpath = check_output(['locate', 'jni.h'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkpath1 = jdkpath.split("jni.h")[0]
jdkpath2 = jdkpath1 + '/linux'
run('code-experiments/build/java', ['gcc', '-I', jdkpath1, '-I', jdkpath2, '-c',
'CocoJNI.c'])
run('code-experiments/build/java', ['gcc', '-I', jdkpath1, '-I', jdkpath2, '-o',
'libCocoJNI.so', '-fPIC', '-shared', 'CocoJNI.c'])
# 5. Mac
elif ('darwin' in sys.platform):
jdkversion = check_output(['javac', '-version'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkversion = jdkversion.split()[1]
jdkpath = '/System/Library/Frameworks/JavaVM.framework/Headers'
jdkpath1 = '/Library/Java/JavaVirtualMachines/jdk' + jdkversion + '.jdk/Contents/Home/include'
jdkpath2 = jdkpath1 + '/darwin'
run('code-experiments/build/java', ['gcc', '-I', jdkpath, '-I', jdkpath1, '-I', jdkpath2, '-c', 'CocoJNI.c'])
run('code-experiments/build/java', ['gcc', '-dynamiclib', '-o', 'libCocoJNI.jnilib',
'CocoJNI.o'])
run('code-experiments/build/java', ['javac', 'Problem.java'])
run('code-experiments/build/java', ['javac', 'Benchmark.java'])
run('code-experiments/build/java', ['javac', 'Observer.java'])
run('code-experiments/build/java', ['javac', 'Suite.java'])
run('code-experiments/build/java', ['javac', 'ExampleExperiment.java'])
def help():
print("""COCO framework bootstrap tool. Version %s
Usage: do.py <command> <arguments>
If you want to get going as quickly as possible do once
python do.py run-<your-language>
and
python do.py install-postprocessing
and you are all set.
Available commands for users:
build-c - Build C module
build-java - Build Java module
build-matlab - Build Matlab module
build-matlab-sms - Build SMS-EMOA example in Matlab
build-octave - Build Matlab module in Octave
build-python - Build Python modules
build-python2 - Build Python 2 modules
build-python3 - Build Python 3 modules
install-postprocessing - Install postprocessing (user-locally)
run-c - Build and run example experiment in C
run-java - Build and run example experiment in Java
run-matlab - Build and run example experiment in MATLAB
run-matlab-sms - Build and run SMS-EMOA on bbob-biobj suite in MATLAB
run-octave - Build and run example experiment in Octave
run-python - Build and install COCO module and run tests and the
example experiment in Python, "no-tests" omits tests
Available commands for developers:
build - Build C, Java and Python modules
run - Run example experiments in C, Java and Python
silent cmd ... - Calls "do.py cmd ..." and remains silent if no error occurs
verbose cmd ... - Calls "do.py cmd ..." and shows more output
test - Test C, Java and Python modules
run-sandbox-python - Run a Python script with installed COCO module
Takes a single argument (name of Python script file)
test-c - Build and run unit tests, integration tests
and an example experiment test in C
test-c-unit - Build and run unit tests in C
test-c-integration - Build and run integration tests in C
test-c-example - Build and run an example experiment test in C
test-java - Build and run a test in Java
test-python - Build and run minimal test of Python module
test-python2 - Build and run minimal test of Python 2 module
test-python3 - Build and run minimal test of Python 3 module
test-octave - Build and run example experiment in Octave
test-postprocessing - Runs some of the post-processing tests.
test-postprocessing-all - Runs all of the post-processing tests.
verify-postprocessing - Checks if the generated html is up-to-date.
leak-check - Check for memory leaks in C
install-preprocessing - Install preprocessing (user-locally)
To build a release version which does not include debugging information in the
amalgamations set the environment variable COCO_RELEASE to 'true'.
""" % git_version(pep440=True))
def help():
print("""COCO framework bootstrap tool. Version %s
Usage: do.py <command> <arguments>
If you want to get going as quickly as possible do once
python do.py run-<your-language>
and
python do.py install-postprocessing
and you are all set.
Available commands for users:
build-c - Build C module
build-java - Build Java module
build-matlab - Build Matlab module
build-matlab-sms - Build SMS-EMOA example in Matlab
build-octave - Build Matlab module in Octave
build-python - Build Python modules
build-python2 - Build Python 2 modules
build-python3 - Build Python 3 modules
install-postprocessing - Install postprocessing (user-locally)
run-c - Build and run example experiment in C
run-java - Build and run example experiment in Java
run-matlab - Build and run example experiment in MATLAB
run-matlab-sms - Build and run SMS-EMOA on bbob-biobj suite in MATLAB
run-octave - Build and run example experiment in Octave
run-python - Build and install COCO module and run tests and the
example experiment in Python, "no-tests" omits tests
Available commands for developers:
build - Build C, Java and Python modules
run - Run example experiments in C, Java and Python
silent cmd ... - Calls "do.py cmd ..." and remains silent if no error occurs
verbose cmd ... - Calls "do.py cmd ..." and shows more output
test - Test C, Java and Python modules
run-sandbox-python - Run a Python script with installed COCO module
Takes a single argument (name of Python script file)
test-c - Build and run unit tests, integration tests
and an example experiment test in C
test-c-unit - Build and run unit tests in C
test-c-integration - Build and run integration tests in C
test-c-example - Build and run an example experiment test in C
test-java - Build and run a test in Java
test-python - Build and run minimal test of Python module
test-python2 - Build and run minimal test of Python 2 module
test-python3 - Build and run minimal test of Python 3 module
test-octave - Build and run example experiment in Octave
test-postprocessing - Runs some of the post-processing tests
test-postprocessing-all - Runs all of the post-processing tests [needs access to the internet]
verify-postprocessing - Checks if the generated html is up-to-date
leak-check - Check for memory leaks in C
install-preprocessing - Install preprocessing (user-locally)
test-preprocessing - Runs preprocessing tests [needs access to the internet]
To build a release version which does not include debugging information in the
amalgamations set the environment variable COCO_RELEASE to 'true'.
""" % git_version(pep440=True))
def build_java():
""" Builds the example experiment in Java """
global RELEASE
amalgamate(CORE_FILES + ['code-experiments/src/coco_runtime_c.c'],
'code-experiments/build/java/coco.c', RELEASE,
{"COCO_VERSION": git_version(pep440=True)})
expand_file('code-experiments/src/coco.h', 'code-experiments/build/java/coco.h',
{'COCO_VERSION': git_version(pep440=True)})
write_file(git_revision(), "code-experiments/build/java/REVISION")
write_file(git_version(), "code-experiments/build/java/VERSION")
run('code-experiments/build/java', ['javac', 'CocoJNI.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javah', 'CocoJNI'], verbose=_verbosity)
# Finds the path to the headers jni.h and jni_md.h (platform-dependent)
# and compiles the CocoJNI library (compiler-dependent). So far, only
# the following cases are covered:
# 1. Windows with Cygwin (both 64-bit)
# Note that 'win32' stands for both Windows 32-bit and 64-bit.
# Since platform 'cygwin' does not work as expected, we need to look for it in the PATH.
if ('win32' in sys.platform) and ('cygwin' in os.environ['PATH']):
jdkpath = check_output(['where', 'javac'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkpath1 = jdkpath.split("bin")[0] + 'include'
jdkpath2 = jdkpath1 + '\\win32'
if '64' in platform.machine():
run('code-experiments/build/java', ['x86_64-w64-mingw32-gcc', '-I', jdkpath1, '-I',
jdkpath2, '-shared', '-o', 'CocoJNI.dll',
'CocoJNI.c'], verbose=_verbosity)
# 2. Windows with Cygwin (both 32-bit)
elif '32' in platform.machine() or 'x86' in platform.machine():
run('code-experiments/build/java', ['i686-w64-mingw32-gcc', '-Wl,--kill-at', '-I',
jdkpath1, '-I', jdkpath2, '-shared', '-o',
'CocoJNI.dll', 'CocoJNI.c'], verbose=_verbosity)
# 3. Windows without Cygwin
elif ('win32' in sys.platform) and ('cygwin' not in os.environ['PATH']):
jdkpath = check_output(['where', 'javac'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkpath1 = jdkpath.split("bin")[0] + 'include'
jdkpath2 = jdkpath1 + '\\win32'
run('code-experiments/build/java',
['gcc', '-Wl,--kill-at', '-I', jdkpath1, '-I', jdkpath2,
'-shared', '-o', 'CocoJNI.dll', 'CocoJNI.c'],
verbose=_verbosity)
# 4. Linux
elif 'linux' in sys.platform:
jdkpath = check_output(['locate', 'jni.h'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkpath1 = jdkpath.split("jni.h")[0]
jdkpath2 = jdkpath1 + '/linux'
run('code-experiments/build/java',
['gcc', '-I', jdkpath1, '-I', jdkpath2, '-c', 'CocoJNI.c'],
verbose=_verbosity)
run('code-experiments/build/java',
['gcc', '-I', jdkpath1, '-I', jdkpath2, '-o',
'libCocoJNI.so', '-fPIC', '-shared', 'CocoJNI.c'],
verbose=_verbosity)
# 5. Mac
elif 'darwin' in sys.platform:
jdkversion = check_output(['javac', '-version'], stderr=STDOUT,
env=os.environ, universal_newlines=True)
jdkversion = jdkversion.split()[1]
jdkpath = '/System/Library/Frameworks/JavaVM.framework/Headers'
jdkpath1 = ('/Library/Java/JavaVirtualMachines/jdk' +
jdkversion + '.jdk/Contents/Home/include')
jdkpath2 = jdkpath1 + '/darwin'
run('code-experiments/build/java',
['gcc', '-I', jdkpath, '-I', jdkpath1, '-I', jdkpath2, '-c', 'CocoJNI.c'],
verbose=_verbosity)
run('code-experiments/build/java',
['gcc', '-dynamiclib', '-o', 'libCocoJNI.jnilib', 'CocoJNI.o'],
verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'Problem.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'Benchmark.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'Observer.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'Suite.java'], verbose=_verbosity)
run('code-experiments/build/java', ['javac', 'ExampleExperiment.java'], verbose=_verbosity)
def help():
print("""COCO framework bootstrap tool. Version %s
Usage: do.py <command> <arguments>
If you want to get going as quickly as possible do once
python do.py run-<your-language>
and
python do.py install-postprocessing
and you are all set.
Available commands for users:
build-c - Build C module
build-java - Build Java module
build-matlab - Build Matlab module
build-matlab-sms - Build SMS-EMOA example in Matlab
build-octave - Build Matlab module in Octave
build-python - Build Python modules (see NOTE below)
install-postprocessing - Install postprocessing (see NOTE below)
run-c - Build and run example experiment in C
run-java - Build and run example experiment in Java
run-matlab - Build and run example experiment in MATLAB
run-matlab-sms - Build and run SMS-EMOA on bbob-biobj suite in
MATLAB
run-octave - Build and run example experiment in Octave
run-python - Build and install COCO module and then run the
example experiment in Python. The optional
parameter "and-test" also runs the tests of
`coco_test.py` (see NOTE below)
Available commands for developers:
build - Build C, Java and Python modules (see NOTE below)
run - Run example experiments in C, Java and Python (see
NOTE below)
silent cmd ... - Calls "do.py cmd ..." and remains silent if no
error occurs
verbose cmd ... - Calls "do.py cmd ..." and shows more output
test - Test C, Java and Python modules (see NOTE below)
run-sandbox-python - Run a Python script with installed COCO module
Takes a single argument(name of Python script file)
test-c - Build and run unit tests, integration tests
and an example experiment test in C
test-c-unit - Build and run unit tests in C
test-c-integration - Build and run integration tests in C
test-c-example - Build and run an example experiment test in C
test-java - Build and run a test in Java
test-python - Build and run minimal test of Python module
test-octave - Build and run example experiment in Octave
test-postprocessing - Runs some of the post-processing tests (see NOTE
below)
test-postprocessing-all - Runs all of the post-processing tests [needs access
to the internet] (see NOTE below)
test-suites - Runs regression test on all benchmark suites
verify-postprocessing - Checks if the generated html is up-to-date (see
NOTE below)
leak-check - Check for memory leaks in C
install-preprocessing - Install preprocessing (user-locally) (see NOTE
below)
test-preprocessing - Runs preprocessing tests [needs access to the
internet] (see NOTE below)
NOTE: These commands install Python packages to the global site packages by
by default. This behavior can be modified by providing one of the
following arguments.
install-user - Installs under the user directory
install-home=<dir> - Installs under the specified home directory
To build a release version which does not include debugging information in the
amalgamations set the environment variable COCO_RELEASE to 'true'.
""" % git_version(pep440=True))
