def test_create_advanced_pip(self):
with make_temp_envs_dir() as envs_dir:
with env_vars(
{
'CONDA_ENVS_DIRS': envs_dir,
'CONDA_DLL_SEARCH_MODIFICATION_ENABLE': 'true',
},
stack_callback=conda_tests_ctxt_mgmt_def_pol):
env_name = str(uuid4())[:8]
run_command(Commands.CREATE, env_name,
support_file('pip_argh.yml'))
out_file = join(envs_dir, 'test_env.yaml')
# make sure that the export reconsiders the presence of pip interop being enabled
PrefixData._cache_.clear()
with env_vars({
'CONDA_ENVS_DIRS': envs_dir,
},
stack_callback=conda_tests_ctxt_mgmt_def_pol):
# note: out of scope of pip interop var. Should be enabling conda pip interop itself.
run_command(Commands.EXPORT, env_name, out_file)
with open(out_file) as f:
d = yaml_round_trip_load(f)
assert {'pip': ['argh==0.26.2']} in d['dependencies']
def test_create_advanced_pip(self):
with make_temp_envs_dir() as envs_dir:
with env_vars({
'CONDA_ENVS_DIRS': envs_dir,
'CONDA_PIP_INTEROP_ENABLED': 'true',
}, reset_context):
env_name = str(uuid4())[:8]
prefix = join(envs_dir, env_name)
python_path = join(prefix, PYTHON_BINARY)
run_command(Commands.CREATE, env_name,
support_file('pip_argh.yml'))
out_file = join(envs_dir, 'test_env.yaml')
# make sure that the export reconsiders the presence of pip interop being enabled
PrefixData._cache_.clear()
with env_vars({
'CONDA_ENVS_DIRS': envs_dir,
}, reset_context):
# note: out of scope of pip interop var. Should be enabling conda pip interop itself.
run_command(Commands.EXPORT, env_name, out_file)
with open(out_file) as f:
d = ruamel_yaml.load(f)
assert {'pip': ['argh==0.26.2']} in d['dependencies']
def test_create_advanced_pip(self):
with make_temp_envs_dir() as envs_dir:
with env_vars(
{
'CONDA_ENVS_DIRS': envs_dir,
'CONDA_PIP_INTEROP_ENABLED': 'true',
}, reset_context):
env_name = str(uuid4())[:8]
prefix = join(envs_dir, env_name)
python_path = join(prefix, PYTHON_BINARY)
run_command(Commands.CREATE, env_name,
support_file('pip_argh.yml'))
out_file = join(envs_dir, 'test_env.yaml')
# make sure that the export reconsiders the presence of pip interop being enabled
PrefixData._cache_.clear()
with env_vars({
'CONDA_ENVS_DIRS': envs_dir,
}, reset_context):
# note: out of scope of pip interop var. Should be enabling conda pip interop itself.
run_command(Commands.EXPORT, env_name, out_file)
with open(out_file) as f:
d = ruamel_yaml.load(f)
assert {'pip': ['argh==0.26.2']} in d['dependencies']
def test_subdirs_env_var(self):
subdirs = ('linux-highest', 'linux-64', 'noarch')
def _channel_urls(channels=None):
for channel in channels or DEFAULT_CHANNELS:
channel = Channel(channel)
for subdir in subdirs:
yield join_url(channel.base_url, subdir)
with env_vars(dict({'CONDA_SUBDIRS': ','.join(subdirs)}), stack_callback=conda_tests_ctxt_mgmt_def_pol):
c = Channel('defaults')
assert c.urls() == list(_channel_urls())
c = Channel('conda-forge')
assert c.urls() == list(_channel_urls(('conda-forge',)))
channels = ('bioconda', 'conda-forge')
prioritized = prioritize_channels(channels)
assert prioritized == OrderedDict((
("https://conda.anaconda.org/bioconda/linux-highest", ("bioconda", 0)),
("https://conda.anaconda.org/bioconda/linux-64", ("bioconda", 0)),
("https://conda.anaconda.org/bioconda/noarch", ("bioconda", 0)),
("https://conda.anaconda.org/conda-forge/linux-highest", ("conda-forge", 1)),
("https://conda.anaconda.org/conda-forge/linux-64", ("conda-forge", 1)),
("https://conda.anaconda.org/conda-forge/noarch", ("conda-forge", 1)),
))
prioritized = prioritize_channels(channels, subdirs=('linux-again', 'noarch'))
assert prioritized == OrderedDict((
("https://conda.anaconda.org/bioconda/linux-again", ("bioconda", 0)),
("https://conda.anaconda.org/bioconda/noarch", ("bioconda", 0)),
("https://conda.anaconda.org/conda-forge/linux-again", ("conda-forge", 1)),
("https://conda.anaconda.org/conda-forge/noarch", ("conda-forge", 1)),
))
def test_create_advanced_pip(self):
with make_temp_envs_dir() as envs_dir:
with env_vars({
'CONDA_ENVS_DIRS': envs_dir,
},
stack_callback=conda_tests_ctxt_mgmt_def_pol):
env_name = str(uuid4())[:8]
prefix = join(envs_dir, env_name)
python_path = join(prefix, PYTHON_BINARY)
run_command(
Commands.CREATE, env_name,
support_file(join('advanced-pip', 'environment.yml')))
assert exists(python_path)
PrefixData._cache_.clear()
assert package_is_installed(prefix, 'argh', pip=True)
assert package_is_installed(
prefix, 'module-to-install-in-editable-mode', pip=True)
try:
assert package_is_installed(prefix, 'six', pip=True)
except AssertionError:
# six may now be conda-installed because of packaging changes
assert package_is_installed(prefix, 'six', pip=False)
assert package_is_installed(prefix,
'xmltodict=0.10.2',
pip=True)
def test_subdirs_env_var(self):
subdirs = ('linux-highest', 'linux-64', 'noarch')
def _channel_urls(channels=None):
for channel in channels or DEFAULT_CHANNELS:
channel = Channel(channel)
for subdir in subdirs:
yield join_url(channel.base_url, subdir)
with env_vars(dict({'CONDA_SUBDIRS': ','.join(subdirs)}), stack_callback=conda_tests_ctxt_mgmt_def_pol):
c = Channel('defaults')
assert c.urls() == list(_channel_urls())
c = Channel('conda-forge')
assert c.urls() == list(_channel_urls(('conda-forge',)))
channels = ('bioconda', 'conda-forge')
prioritized = prioritize_channels(channels)
assert prioritized == OrderedDict((
("https://conda.anaconda.org/bioconda/linux-highest", ("bioconda", 0)),
("https://conda.anaconda.org/bioconda/linux-64", ("bioconda", 0)),
("https://conda.anaconda.org/bioconda/noarch", ("bioconda", 0)),
("https://conda.anaconda.org/conda-forge/linux-highest", ("conda-forge", 1)),
("https://conda.anaconda.org/conda-forge/linux-64", ("conda-forge", 1)),
("https://conda.anaconda.org/conda-forge/noarch", ("conda-forge", 1)),
))
prioritized = prioritize_channels(channels, subdirs=('linux-again', 'noarch'))
assert prioritized == OrderedDict((
("https://conda.anaconda.org/bioconda/linux-again", ("bioconda", 0)),
("https://conda.anaconda.org/bioconda/noarch", ("bioconda", 0)),
("https://conda.anaconda.org/conda-forge/linux-again", ("conda-forge", 1)),
("https://conda.anaconda.org/conda-forge/noarch", ("conda-forge", 1)),
))
def test_initialize_dev_cmd_exe(self):
with env_vars({'CONDA_DRY_RUN': 'true', 'CONDA_VERBOSITY': '0'}, reset_context):
with tempdir() as conda_temp_prefix:
new_py = abspath(join(conda_temp_prefix, get_python_short_path()))
mkdir_p(dirname(new_py))
create_link(abspath(sys.executable), new_py, LinkType.hardlink if on_win else LinkType.softlink)
with captured() as c:
initialize_dev('cmd.exe', dev_env_prefix=conda_temp_prefix, conda_source_root=dirname(CONDA_PACKAGE_ROOT))
print(c.stdout)
print(c.stderr, file=sys.stderr)
if on_win:
modified_files = (
'conda.exe',
'conda-env.exe',
'conda-script.py',
'conda-env-script.py',
'conda.bat',
'_conda_activate.bat',
'conda_auto_activate.bat',
'conda_hook.bat',
'activate.bat',
'activate.bat',
'deactivate.bat',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'conda.xsh',
'conda.csh',
'site-packages', # remove conda in site-packages dir
'conda.egg-link',
'easy-install.pth',
'conda.egg-info',
)
else:
modified_files = (
'conda',
'conda-env',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'conda.xsh',
'conda.csh',
'site-packages', # remove conda in site-packages dir
'conda.egg-link',
'easy-install.pth',
'conda.egg-info',
)
stderr = c.stderr.replace('no change', 'modified')
assert stderr.count('modified') == len(modified_files)
for fn in modified_files:
line = next(line for line in stderr.splitlines() if line.strip().endswith(fn))
assert line.strip().startswith('modified'), line
def test_install_1(self):
with env_vars({
'CONDA_DRY_RUN': 'true',
'CONDA_VERBOSITY': '0'
},
stack_callback=conda_tests_ctxt_mgmt_def_pol):
with tempdir() as conda_temp_prefix:
with captured() as c:
install(conda_temp_prefix)
assert "WARNING: Cannot install xonsh wrapper" in c.stderr
if on_win:
modified_files = (
'conda.exe',
'conda-env.exe',
'conda-script.py',
'conda-env-script.py',
'conda.bat', # condabin/conda.bat
'conda.bat', # Library/bin/conda.bat
'_conda_activate.bat',
'rename_tmp.bat',
'conda_auto_activate.bat',
'conda_hook.bat',
'activate.bat',
'activate.bat',
'deactivate.bat',
'activate',
'deactivate',
'conda.sh',
'conda_bash.sh',
'conda', # etc/bash_completion.d/conda
'conda.fish',
'Conda.psm1',
'conda-hook.ps1',
'conda.csh',
)
else:
modified_files = (
'conda', # condabin/conda
'conda', # bin/conda
'conda-env',
'activate',
'deactivate',
'conda.sh',
'conda_bash.sh',
'conda', # etc/bash_completion.d/conda
'conda.fish',
'Conda.psm1',
'conda-hook.ps1',
'conda.csh',
)
print(c.stdout)
print(c.stderr, file=sys.stderr)
assert c.stdout.count('modified') == len(modified_files)
for fn in modified_files:
line = next(line for line in c.stdout.splitlines()
if line.strip().endswith(fn))
assert line.strip().startswith('modified'), line
def test_initialize_dev_cmd_exe(self):
with env_vars({'CONDA_DRY_RUN': 'true', 'CONDA_VERBOSITY': '0'}, reset_context):
with tempdir() as conda_temp_prefix:
new_py = abspath(join(conda_temp_prefix, get_python_short_path()))
mkdir_p(dirname(new_py))
create_link(abspath(sys.executable), new_py, LinkType.hardlink if on_win else LinkType.softlink)
with captured() as c:
initialize_dev('cmd.exe', dev_env_prefix=conda_temp_prefix, conda_source_root=dirname(CONDA_PACKAGE_ROOT))
print(c.stdout)
print(c.stderr, file=sys.stderr)
if on_win:
modified_files = (
'conda.exe',
'conda-env.exe',
'conda-script.py',
'conda-env-script.py',
'conda.bat',
'_conda_activate.bat',
'conda_auto_activate.bat',
'conda_hook.bat',
'activate.bat',
'activate.bat',
'deactivate.bat',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'conda.xsh',
'conda.csh',
'site-packages', # remove conda in site-packages dir
'conda.egg-link',
'easy-install.pth',
'conda.egg-info',
)
else:
modified_files = (
'conda',
'conda-env',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'conda.xsh',
'conda.csh',
'site-packages', # remove conda in site-packages dir
'conda.egg-link',
'easy-install.pth',
'conda.egg-info',
)
stderr = c.stderr.replace('no change', 'modified')
assert stderr.count('modified') == len(modified_files)
for fn in modified_files:
line = next(line for line in stderr.splitlines() if line.strip().endswith(fn))
assert line.strip().startswith('modified'), line
def test_supplement_index_with_system_linux(release_str, version):
index = {}
with env_vars({'CONDA_OVERRIDE_LINUX': release_str}):
_supplement_index_with_system(index)
linux_pkg = next(iter(_ for _ in index if _.name == '__linux'))
assert linux_pkg.version == version
assert linux_pkg.package_type == PackageType.VIRTUAL_SYSTEM
def test_supplement_index_with_system_linux_extended():
index = {}
with env_vars({'CONDA_OVERRIDE_LINUX': '4.2.0-42-generic'}):
_supplement_index_with_system(index)
linux_pkg = next(iter(_ for _ in index if _.name == '__linux'))
assert linux_pkg.version == '4.2.0'
assert linux_pkg.package_type == PackageType.VIRTUAL_SYSTEM
def test_supplement_index_with_system_osx():
index = {}
with env_vars({'CONDA_OVERRIDE_OSX': '0.15'}):
_supplement_index_with_system(index)
osx_pkg = next(iter(_ for _ in index if _.name == '__osx'))
assert osx_pkg.version == '0.15'
assert osx_pkg.package_type == PackageType.VIRTUAL_SYSTEM
def test_supplement_index_with_system():
index = {}
with env_vars({'CONDA_OVERRIDE_CUDA': '3.2'}):
_supplement_index_with_system(index)
cuda_pkg = index['__cuda']
assert cuda_pkg.version == '3.2'
assert cuda_pkg.package_type == PackageType.VIRTUAL_SYSTEM
def test_supplement_index_with_system():
index = {}
with env_vars({'CONDA_OVERRIDE_CUDA': '3.2'}):
_supplement_index_with_system(index)
cuda_pkg = index['_cuda']
assert cuda_pkg.version == '3.2'
assert cuda_pkg.package_type == PackageType.VIRTUAL_SYSTEM
def test_supplement_index_with_system_glibc():
index = {}
with env_vars({'CONDA_OVERRIDE_GLIBC': '2.10'}):
_supplement_index_with_system(index)
glibc_pkg = next(iter(_ for _ in index if _.name == '__glibc'))
assert glibc_pkg.version == '2.10'
assert glibc_pkg.package_type == PackageType.VIRTUAL_SYSTEM
def test_supplement_index_with_system_cuda():
index = {}
with env_vars({'CONDA_OVERRIDE_CUDA': '3.2'}):
_supplement_index_with_system(index)
cuda_pkg = next(iter(_ for _ in index if _.name == '__cuda'))
assert cuda_pkg.version == '3.2'
assert cuda_pkg.package_type == PackageType.VIRTUAL_SYSTEM
def test_expanded_variables(self):
with env_vars({'EXPANDED_VAR': 'itsexpanded', 'BOOL_VAR': 'True'}):
config = SampleConfiguration()._set_raw_data(load_from_string_data('env_vars'))
assert config.env_var_map['expanded'] == 'itsexpanded'
assert config.env_var_map['unexpanded'] == '$UNEXPANDED_VAR'
assert config.env_var_str == 'itsexpanded'
assert config.env_var_bool is True
assert config.normal_str == '$EXPANDED_VAR'
assert config.env_var_list == ('itsexpanded', '$UNEXPANDED_VAR', 'regular_var')
def test_tar_bz2_in_pkg_cache_doesnt_overwrite_conda_pkg():
"""
Test that if a .tar.bz2 package is downloaded and extracted in a package cache, the
complementary .conda package replaces it if that's what is requested.
"""
with env_vars({'CONDA_SEPARATE_FORMAT_CACHE': True},
stack_callback=conda_tests_ctxt_mgmt_def_pol):
with make_temp_package_cache() as pkgs_dir:
# Cache the .tar.bz2 file in the package cache and extract it
pfe = ProgressiveFetchExtract((zlib_tar_bz2_prec, ))
pfe.prepare()
assert len(pfe.cache_actions) == 1
assert len(pfe.extract_actions) == 1
cache_action = pfe.cache_actions[0]
extact_action = pfe.extract_actions[0]
assert basename(cache_action.target_full_path) == zlib_tar_bz2_fn
assert cache_action.target_full_path == extact_action.source_full_path
assert basename(extact_action.target_full_path) == zlib_base_fn
# Go ahead with executing download and extract now
pfe.execute()
assert isfile(join(pkgs_dir, zlib_tar_bz2_fn))
assert isfile(
join(pkgs_dir, zlib_base_fn, "info", "repodata_record.json"))
# Ensure second download/extract is a no-op
pfe = ProgressiveFetchExtract((zlib_tar_bz2_prec, ))
pfe.prepare()
assert len(pfe.cache_actions) == 0
assert len(pfe.extract_actions) == 0
# Now ensure download/extract for the complementary .conda package replaces the
# extracted .tar.bz2
pfe = ProgressiveFetchExtract((zlib_conda_prec, ))
pfe.prepare()
assert len(pfe.cache_actions) == 1
assert len(pfe.extract_actions) == 1
cache_action = pfe.cache_actions[0]
extact_action = pfe.extract_actions[0]
assert basename(cache_action.target_full_path) == zlib_conda_fn
assert cache_action.target_full_path == extact_action.source_full_path
assert basename(extact_action.target_full_path) == zlib_base_fn
pfe.execute()
with open(
join(pkgs_dir, zlib_base_fn, "info",
"repodata_record.json")) as fh:
repodata_record = json.load(fh)
assert repodata_record["fn"] == zlib_conda_fn
# Now check urls.txt to make sure extensions are included.
urls_text = tuple(yield_lines(join(pkgs_dir, "urls.txt")))
assert urls_text[0] == zlib_tar_bz2_prec.url
assert urls_text[1] == zlib_conda_prec.url
def test_expanded_variables(self):
with env_vars({'EXPANDED_VAR': 'itsexpanded', 'BOOL_VAR': 'True'}):
config = SampleConfiguration()._set_raw_data(
load_from_string_data('env_vars'))
assert config.env_var_map['expanded'] == 'itsexpanded'
assert config.env_var_map['unexpanded'] == '$UNEXPANDED_VAR'
assert config.env_var_str == 'itsexpanded'
assert config.env_var_bool is True
assert config.normal_str == '$EXPANDED_VAR'
assert config.env_var_list == ('itsexpanded', '$UNEXPANDED_VAR',
'regular_var')
def test_tar_bz2_in_pkg_cache_doesnt_overwrite_conda_pkg():
"""
Test that if a .tar.bz2 package is downloaded and extracted in a package cache, the
complementary .conda package replaces it if that's what is requested.
"""
with env_vars({'CONDA_SEPARATE_FORMAT_CACHE': True},
stack_callback=conda_tests_ctxt_mgmt_def_pol):
with make_temp_package_cache() as pkgs_dir:
# Cache the .tar.bz2 file in the package cache and extract it
pfe = ProgressiveFetchExtract((zlib_tar_bz2_prec,))
pfe.prepare()
assert len(pfe.cache_actions) == 1
assert len(pfe.extract_actions) == 1
cache_action = pfe.cache_actions[0]
extact_action = pfe.extract_actions[0]
assert basename(cache_action.target_full_path) == zlib_tar_bz2_fn
assert cache_action.target_full_path == extact_action.source_full_path
assert basename(extact_action.target_full_path) == zlib_base_fn
# Go ahead with executing download and extract now
pfe.execute()
assert isfile(join(pkgs_dir, zlib_tar_bz2_fn))
assert isfile(join(pkgs_dir, zlib_base_fn, "info", "repodata_record.json"))
# Ensure second download/extract is a no-op
pfe = ProgressiveFetchExtract((zlib_tar_bz2_prec,))
pfe.prepare()
assert len(pfe.cache_actions) == 0
assert len(pfe.extract_actions) == 0
# Now ensure download/extract for the complementary .conda package replaces the
# extracted .tar.bz2
pfe = ProgressiveFetchExtract((zlib_conda_prec,))
pfe.prepare()
assert len(pfe.cache_actions) == 1
assert len(pfe.extract_actions) == 1
cache_action = pfe.cache_actions[0]
extact_action = pfe.extract_actions[0]
assert basename(cache_action.target_full_path) == zlib_conda_fn
assert cache_action.target_full_path == extact_action.source_full_path
assert basename(extact_action.target_full_path) == zlib_base_fn
pfe.execute()
with open(join(pkgs_dir, zlib_base_fn, "info", "repodata_record.json")) as fh:
repodata_record = json.load(fh)
assert repodata_record["fn"] == zlib_conda_fn
# Now check urls.txt to make sure extensions are included.
urls_text = tuple(yield_lines(join(pkgs_dir, "urls.txt")))
assert urls_text[0] == zlib_tar_bz2_prec.url
assert urls_text[1] == zlib_conda_prec.url
def test_create_advanced_pip(self):
with make_temp_envs_dir() as envs_dir:
with env_vars({
'CONDA_ENVS_DIRS': envs_dir,
'CONDA_DLL_SEARCH_MODIFICATION_ENABLE': 'true',
}, stack_callback=conda_tests_ctxt_mgmt_def_pol):
env_name = str(uuid4())[:8]
run_command(Commands.CREATE, env_name,
support_file('pip_argh.yml'))
out_file = join(envs_dir, 'test_env.yaml')
# make sure that the export reconsiders the presence of pip interop being enabled
PrefixData._cache_.clear()
with env_vars({
'CONDA_ENVS_DIRS': envs_dir,
}, stack_callback=conda_tests_ctxt_mgmt_def_pol):
# note: out of scope of pip interop var. Should be enabling conda pip interop itself.
run_command(Commands.EXPORT, env_name, out_file)
with open(out_file) as f:
d = yaml_load(f)
assert {'pip': ['argh==0.26.2']} in d['dependencies']
def test_install_1(self):
with env_vars({'CONDA_DRY_RUN': 'true', 'CONDA_VERBOSITY': '0'}, conda_tests_ctxt_mgmt_def_pol):
with tempdir() as conda_temp_prefix:
with captured() as c:
install(conda_temp_prefix)
assert "WARNING: Cannot install xonsh wrapper" in c.stderr
if on_win:
modified_files = (
'conda.exe',
'conda-env.exe',
'conda-script.py',
'conda-env-script.py',
'conda.bat', # condabin/conda.bat
'conda.bat', # Library/bin/conda.bat
'_conda_activate.bat',
'rename_tmp.bat',
'conda_auto_activate.bat',
'conda_hook.bat',
'activate.bat',
'activate.bat',
'deactivate.bat',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'Conda.psm1',
'conda-hook.ps1',
'conda.csh',
)
else:
modified_files = (
'conda', # condabin/conda
'conda', # bin/conda
'conda-env',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'Conda.psm1',
'conda-hook.ps1',
'conda.csh',
)
print(c.stdout)
print(c.stderr, file=sys.stderr)
assert c.stdout.count('modified') == len(modified_files)
for fn in modified_files:
line = next(line for line in c.stdout.splitlines() if line.strip().endswith(fn))
assert line.strip().startswith('modified'), line
def test_threads(self):
default_value = None
assert context.default_threads == default_value
assert context.repodata_threads == default_value
assert context.verify_threads == 1
assert context.execute_threads == 1
with env_var('CONDA_DEFAULT_THREADS',
'3',
stack_callback=conda_tests_ctxt_mgmt_def_pol):
assert context.default_threads == 3
assert context.verify_threads == 3
assert context.repodata_threads == 3
assert context.execute_threads == 3
with env_var('CONDA_VERIFY_THREADS',
'3',
stack_callback=conda_tests_ctxt_mgmt_def_pol):
assert context.default_threads == default_value
assert context.verify_threads == 3
assert context.repodata_threads == default_value
assert context.execute_threads == 1
with env_var('CONDA_REPODATA_THREADS',
'3',
stack_callback=conda_tests_ctxt_mgmt_def_pol):
assert context.default_threads == default_value
assert context.verify_threads == 1
assert context.repodata_threads == 3
assert context.execute_threads == 1
with env_var('CONDA_EXECUTE_THREADS',
'3',
stack_callback=conda_tests_ctxt_mgmt_def_pol):
assert context.default_threads == default_value
assert context.verify_threads == 1
assert context.repodata_threads == default_value
assert context.execute_threads == 3
with env_vars(
{
'CONDA_EXECUTE_THREADS': '3',
'CONDA_DEFAULT_THREADS': '1'
},
stack_callback=conda_tests_ctxt_mgmt_def_pol):
assert context.default_threads == 1
assert context.verify_threads == 1
assert context.repodata_threads == 1
assert context.execute_threads == 3
def test_install_1(self):
with env_vars({
'CONDA_DRY_RUN': 'true',
'CONDA_VERBOSITY': '0'
}, reset_context):
with tempdir() as conda_temp_prefix:
with captured() as c:
install(conda_temp_prefix)
assert "WARNING: Cannot install xonsh wrapper" in c.stderr
if on_win:
modified_files = (
'conda.exe',
'conda-env.exe',
'conda-script.py',
'conda-env-script.py',
'conda.bat',
'_conda_activate.bat',
'conda_auto_activate.bat',
'conda_hook.bat',
'activate.bat',
'activate.bat',
'deactivate.bat',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'conda.csh',
)
else:
modified_files = (
'conda', # condabin/conda
'conda', # bin/conda
'conda-env',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'conda.csh',
)
print(c.stdout)
print(c.stderr, file=sys.stderr)
assert c.stdout.count('modified') == len(modified_files)
for fn in modified_files:
line = next(line for line in c.stdout.splitlines()
if line.strip().endswith(fn))
assert line.strip().startswith('modified'), line
def test_check_whitelist():
whitelist = ('defaults', 'conda-forge',
'https://beta.conda.anaconda.org/conda-test')
with env_vars({'CONDA_WHITELIST_CHANNELS': ','.join(whitelist)},
stack_callback=conda_tests_ctxt_mgmt_def_pol):
with pytest.raises(ChannelNotAllowed):
get_index(("conda-canary", ))
with pytest.raises(ChannelNotAllowed):
get_index(("https://repo.anaconda.com/pkgs/denied", ))
check_whitelist(("defaults", ))
check_whitelist((DEFAULT_CHANNELS[0], DEFAULT_CHANNELS[1]))
check_whitelist(("https://conda.anaconda.org/conda-forge/linux-64", ))
check_whitelist(("conda-canary", ))
def test_check_whitelist():
whitelist = (
'defaults',
'conda-forge',
'https://beta.conda.anaconda.org/conda-test'
)
with env_vars({'CONDA_WHITELIST_CHANNELS': ','.join(whitelist)}, stack_callback=conda_tests_ctxt_mgmt_def_pol):
with pytest.raises(ChannelNotAllowed):
get_index(("conda-canary",))
with pytest.raises(ChannelNotAllowed):
get_index(("https://repo.anaconda.com/pkgs/denied",))
check_whitelist(("defaults",))
check_whitelist((DEFAULT_CHANNELS[0], DEFAULT_CHANNELS[1]))
check_whitelist(("https://conda.anaconda.org/conda-forge/linux-64",))
check_whitelist(("conda-canary",))
def test_create_advanced_pip(self):
with make_temp_envs_dir() as envs_dir:
with env_vars({
'CONDA_ENVS_DIRS': envs_dir,
}, stack_callback=conda_tests_ctxt_mgmt_def_pol):
env_name = str(uuid4())[:8]
prefix = join(envs_dir, env_name)
python_path = join(prefix, PYTHON_BINARY)
run_command(Commands.CREATE, env_name,
support_file(join('advanced-pip', 'environment.yml')))
assert exists(python_path)
PrefixData._cache_.clear()
assert package_is_installed(prefix, 'argh', pip=True)
assert package_is_installed(prefix, 'module-to-install-in-editable-mode', pip=True)
try:
assert package_is_installed(prefix, 'six', pip=True)
except AssertionError:
# six may now be conda-installed because of packaging changes
assert package_is_installed(prefix, 'six', pip=False)
assert package_is_installed(prefix, 'xmltodict=0.10.2', pip=True)
from conda.exports import subdir
from conda.common.io import env_vars
from conda.cli import python_api
pkgs_dir = os.path.join(sys.prefix, 'pkgs')
channel_map = {
'free': 'https://repo.anaconda.com/pkgs/free',
'main': 'https://repo.anaconda.com/pkgs/main',
'r': 'https://repo.anaconda.com/pkgs/r',
'conda-forge': 'https://conda.anaconda.org/conda-forge',
'bioconda': 'https://conda.anaconda.org/bioconda',
}
with env_vars({
"CONDA_PKGS_DIRS": os.path.join('repos', 'main', subdir),
}):
try:
python_api.run_command("create", "-n", "fakeenv", "--download-only",
"python", "mkl")
except:
pass
if sys.platform != "win32":
try:
python_api.run_command("create", "-n", "fakeenv",
"--download-only", "libopenblas")
except:
pass
for chan, url in channel_map.items():
for _subdir in (subdir, 'noarch'):
def test_posix_basic(self):
activator = Activator('posix')
self.make_dot_d_files(activator.script_extension)
with captured() as c:
rc = activate_main(('', 'shell.posix', 'activate', self.prefix))
assert not c.stderr
assert rc == 0
activate_data = c.stdout
new_path_parts = activator._add_prefix_to_path(self.prefix)
assert activate_data == dals("""
PS1='%(ps1)s'
export CONDA_DEFAULT_ENV='%(native_prefix)s'
export CONDA_PREFIX='%(native_prefix)s'
export CONDA_PROMPT_MODIFIER='(%(native_prefix)s) '
export CONDA_PYTHON_EXE='%(sys_executable)s'
export CONDA_SHLVL='1'
export PATH='%(new_path)s'
. "%(activate1)s"
""") % {
'converted_prefix': activator.path_conversion(self.prefix),
'native_prefix': self.prefix,
'new_path': activator.pathsep_join(new_path_parts),
'sys_executable': activator.path_conversion(sys.executable),
'activate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.sh')),
'ps1': '(%s) ' % self.prefix + os.environ.get('PS1', '')
}
with env_vars({
'CONDA_PREFIX': self.prefix,
'CONDA_SHLVL': '1',
'PATH': os.pathsep.join(concatv(new_path_parts, (os.environ['PATH'],))),
}):
with captured() as c:
rc = activate_main(('', 'shell.posix', 'reactivate'))
assert not c.stderr
assert rc == 0
reactivate_data = c.stdout
assert reactivate_data == dals("""
. "%(deactivate1)s"
export CONDA_PROMPT_MODIFIER='(%(native_prefix)s) '
export CONDA_SHLVL='1'
. "%(activate1)s"
""") % {
'activate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.sh')),
'deactivate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.sh')),
'native_prefix': self.prefix,
}
with captured() as c:
rc = activate_main(('', 'shell.posix', 'deactivate'))
assert not c.stderr
assert rc == 0
deactivate_data = c.stdout
new_path = activator.pathsep_join(activator._remove_prefix_from_path(self.prefix))
assert deactivate_data == dals("""
. "%(deactivate1)s"
unset CONDA_DEFAULT_ENV
unset CONDA_PREFIX
unset CONDA_PROMPT_MODIFIER
unset CONDA_PYTHON_EXE
PS1='%(ps1)s'
export CONDA_SHLVL='0'
export PATH='%(new_path)s'
""") % {
'new_path': new_path,
'deactivate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.sh')),
'ps1': os.environ.get('PS1', ''),
}
def test_powershell_basic(self):
activator = Activator('powershell')
self.make_dot_d_files(activator.script_extension)
with captured() as c:
rc = activate_main(('', 'shell.powershell', 'activate', self.prefix))
assert not c.stderr
assert rc == 0
activate_data = c.stdout
new_path_parts = activator._add_prefix_to_path(self.prefix)
assert activate_data == dals("""
$env:CONDA_DEFAULT_ENV = "%(prefix)s"
$env:CONDA_PREFIX = "%(prefix)s"
$env:CONDA_PROMPT_MODIFIER = "(%(prefix)s) "
$env:CONDA_PYTHON_EXE = "%(sys_executable)s"
$env:CONDA_SHLVL = "1"
$env:PATH = "%(new_path)s"
. "%(activate1)s"
""") % {
'prefix': self.prefix,
'new_path': activator.pathsep_join(new_path_parts),
'sys_executable': sys.executable,
'activate1': join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.ps1')
}
with env_vars({
'CONDA_PREFIX': self.prefix,
'CONDA_SHLVL': '1',
'PATH': os.pathsep.join(concatv(new_path_parts, (os.environ['PATH'],))),
}):
with captured() as c:
rc = activate_main(('', 'shell.powershell', 'reactivate'))
assert not c.stderr
assert rc == 0
reactivate_data = c.stdout
assert reactivate_data == dals("""
$env:CONDA_PROMPT_MODIFIER = "(%(prefix)s) "
$env:CONDA_SHLVL = "1"
. "%(deactivate1)s"
. "%(activate1)s"
""") % {
'activate1': join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.ps1'),
'deactivate1': join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.ps1'),
'prefix': self.prefix,
}
with captured() as c:
rc = activate_main(('', 'shell.powershell', 'deactivate'))
assert not c.stderr
assert rc == 0
deactivate_data = c.stdout
new_path = activator.pathsep_join(activator._remove_prefix_from_path(self.prefix))
assert deactivate_data == dals("""
Remove-Variable CONDA_DEFAULT_ENV
Remove-Variable CONDA_PREFIX
Remove-Variable CONDA_PROMPT_MODIFIER
Remove-Variable CONDA_PYTHON_EXE
$env:CONDA_SHLVL = "0"
$env:PATH = "%(new_path)s"
. "%(deactivate1)s"
""") % {
'new_path': new_path,
'deactivate1': join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.ps1'),
}
def test_fish_basic(self):
activator = Activator('fish')
self.make_dot_d_files(activator.script_extension)
with captured() as c:
rc = activate_main(('', 'shell.fish', 'activate', self.prefix))
assert not c.stderr
assert rc == 0
activate_data = c.stdout
new_path_parts = activator._add_prefix_to_path(self.prefix)
assert activate_data == dals("""
set -gx CONDA_DEFAULT_ENV "%(native_prefix)s"
set -gx CONDA_PREFIX "%(native_prefix)s"
set -gx CONDA_PROMPT_MODIFIER "(%(native_prefix)s) "
set -gx CONDA_PYTHON_EXE "%(sys_executable)s"
set -gx CONDA_SHLVL "1"
set -gx PATH "%(new_path)s"
source "%(activate1)s"
""") % {
'converted_prefix': activator.path_conversion(self.prefix),
'native_prefix': self.prefix,
'new_path': activator.pathsep_join(new_path_parts),
'sys_executable': activator.path_conversion(sys.executable),
'activate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.fish')),
}
with env_vars({
'CONDA_PREFIX': self.prefix,
'CONDA_SHLVL': '1',
'PATH': os.pathsep.join(concatv(new_path_parts, (os.environ['PATH'],))),
}):
with captured() as c:
rc = activate_main(('', 'shell.fish', 'reactivate'))
assert not c.stderr
assert rc == 0
reactivate_data = c.stdout
assert reactivate_data == dals("""
set -gx CONDA_PROMPT_MODIFIER "(%(native_prefix)s) "
set -gx CONDA_SHLVL "1"
source "%(deactivate1)s"
source "%(activate1)s"
""") % {
'activate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.fish')),
'deactivate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.fish')),
'native_prefix': self.prefix,
}
with captured() as c:
rc = activate_main(('', 'shell.fish', 'deactivate'))
assert not c.stderr
assert rc == 0
deactivate_data = c.stdout
new_path = activator.pathsep_join(activator._remove_prefix_from_path(self.prefix))
assert deactivate_data == dals("""
set -e CONDA_DEFAULT_ENV
set -e CONDA_PREFIX
set -e CONDA_PROMPT_MODIFIER
set -e CONDA_PYTHON_EXE
set -gx CONDA_SHLVL "0"
set -gx PATH "%(new_path)s"
source "%(deactivate1)s"
""") % {
'new_path': new_path,
'deactivate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.fish')),
}
def test_xonsh_basic(self):
activator = Activator('xonsh')
self.make_dot_d_files(activator.script_extension)
with captured() as c:
rc = activate_main(('', 'shell.xonsh', 'activate', self.prefix))
assert not c.stderr
assert rc == 0
activate_result = c.stdout
with open(activate_result) as fh:
activate_data = fh.read()
rm_rf(activate_result)
new_path_parts = activator._add_prefix_to_path(self.prefix)
assert activate_data == dals("""
$CONDA_DEFAULT_ENV = "%(native_prefix)s"
$CONDA_PREFIX = "%(native_prefix)s"
$CONDA_PROMPT_MODIFIER = "(%(native_prefix)s) "
$CONDA_PYTHON_EXE = "%(sys_executable)s"
$CONDA_SHLVL = "1"
$PATH = "%(new_path)s"
source "%(activate1)s"
""") % {
'converted_prefix': activator.path_conversion(self.prefix),
'native_prefix': self.prefix,
'new_path': activator.pathsep_join(new_path_parts),
'sys_executable': activator.path_conversion(sys.executable),
'activate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.xsh')),
}
with env_vars({
'CONDA_PREFIX': self.prefix,
'CONDA_SHLVL': '1',
'PATH': os.pathsep.join(concatv(new_path_parts, (os.environ['PATH'],))),
}):
with captured() as c:
assert activate_main(('', 'shell.xonsh', 'reactivate')) == 0
assert not c.stderr
reactivate_result = c.stdout
with open(reactivate_result) as fh:
reactivate_data = fh.read()
rm_rf(reactivate_result)
assert reactivate_data == dals("""
$CONDA_PROMPT_MODIFIER = "(%(native_prefix)s) "
$CONDA_SHLVL = "1"
source "%(deactivate1)s"
source "%(activate1)s"
""") % {
'activate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.xsh')),
'deactivate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.xsh')),
'native_prefix': self.prefix,
}
with captured() as c:
assert activate_main(('', 'shell.xonsh', 'deactivate')) == 0
assert not c.stderr
deactivate_result = c.stdout
with open(deactivate_result) as fh:
deactivate_data = fh.read()
rm_rf(deactivate_result)
new_path = activator.pathsep_join(activator._remove_prefix_from_path(self.prefix))
assert deactivate_data == dals("""
del $CONDA_DEFAULT_ENV
del $CONDA_PREFIX
del $CONDA_PROMPT_MODIFIER
del $CONDA_PYTHON_EXE
$CONDA_SHLVL = "0"
$PATH = "%(new_path)s"
source "%(deactivate1)s"
""") % {
'new_path': new_path,
'deactivate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.xsh')),
}
def test_cmd_exe_basic(self):
activator = Activator('cmd.exe')
self.make_dot_d_files(activator.script_extension)
with captured() as c:
rc = activate_main(('', 'shell.cmd.exe', 'activate', '', self.prefix))
assert not c.stderr
assert rc == 0
activate_result = c.stdout
with open(activate_result) as fh:
activate_data = fh.read()
rm_rf(activate_result)
new_path_parts = activator._add_prefix_to_path(self.prefix)
assert activate_data == dals("""
@SET "CONDA_DEFAULT_ENV=%(native_prefix)s"
@SET "CONDA_PREFIX=%(converted_prefix)s"
@SET "CONDA_PROMPT_MODIFIER=(%(native_prefix)s) "
@SET "CONDA_PYTHON_EXE=%(sys_executable)s"
@SET "CONDA_SHLVL=1"
@SET "PATH=%(new_path)s"
@SET "PYTHONIOENCODING=%(PYTHONIOENCODING)s"
@CALL "%(activate1)s"
""") % {
'converted_prefix': activator.path_conversion(self.prefix),
'native_prefix': self.prefix,
'new_path': activator.pathsep_join(new_path_parts),
'sys_executable': activator.path_conversion(sys.executable),
'activate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.bat')),
'PYTHONIOENCODING': PYTHONIOENCODING,
}
with env_vars({
'CONDA_PREFIX': self.prefix,
'CONDA_SHLVL': '1',
'PATH': os.pathsep.join(concatv(new_path_parts, (os.environ['PATH'],))),
}):
with captured() as c:
assert activate_main(('', 'shell.cmd.exe', 'reactivate')) == 0
assert not c.stderr
reactivate_result = c.stdout
with open(reactivate_result) as fh:
reactivate_data = fh.read()
rm_rf(reactivate_result)
assert reactivate_data == dals("""
@CALL "%(deactivate1)s"
@SET "CONDA_PROMPT_MODIFIER=(%(native_prefix)s) "
@SET "CONDA_SHLVL=1"
@CALL "%(activate1)s"
""") % {
'activate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'activate.d', 'activate1.bat')),
'deactivate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.bat')),
'native_prefix': self.prefix,
}
with captured() as c:
assert activate_main(('', 'shell.cmd.exe', 'deactivate')) == 0
assert not c.stderr
deactivate_result = c.stdout
with open(deactivate_result) as fh:
deactivate_data = fh.read()
rm_rf(deactivate_result)
new_path = activator.pathsep_join(activator._remove_prefix_from_path(self.prefix))
assert deactivate_data == dals("""
@CALL "%(deactivate1)s"
@SET CONDA_DEFAULT_ENV=
@SET CONDA_PREFIX=
@SET CONDA_PROMPT_MODIFIER=
@SET CONDA_PYTHON_EXE=
@SET "CONDA_SHLVL=0"
@SET "PATH=%(new_path)s"
""") % {
'new_path': new_path,
'deactivate1': activator.path_conversion(join(self.prefix, 'etc', 'conda', 'deactivate.d', 'deactivate1.bat')),
}
def test_initialize_dev_bash(self):
with pytest.raises(CondaValueError):
initialize_dev('bash', conda_source_root=join('a', 'b', 'c'))
with env_vars({'CONDA_DRY_RUN': 'true', 'CONDA_VERBOSITY': '0'}, conda_tests_ctxt_mgmt_def_pol):
with tempdir() as conda_temp_prefix:
new_py = abspath(join(conda_temp_prefix, get_python_short_path()))
mkdir_p(dirname(new_py))
create_link(abspath(sys.executable), new_py, LinkType.hardlink if on_win else LinkType.softlink)
with captured() as c:
initialize_dev('bash', dev_env_prefix=conda_temp_prefix, conda_source_root=dirname(CONDA_PACKAGE_ROOT))
print(c.stdout)
print(c.stderr, file=sys.stderr)
if on_win:
modified_files = (
'conda.exe',
'conda-env.exe',
'conda-script.py',
'conda-env-script.py',
'conda.bat', # condabin/conda.bat
'conda.bat', # Library/bin/conda.bat
'_conda_activate.bat',
'rename_tmp.bat',
'conda_auto_activate.bat',
'conda_hook.bat',
'activate.bat',
'activate.bat',
'deactivate.bat',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'Conda.psm1',
'conda-hook.ps1',
'conda.xsh',
'conda.csh',
'site-packages', # remove conda in site-packages dir
'conda.egg-link',
'easy-install.pth',
'conda.egg-info',
)
else:
modified_files = (
'conda', # condabin/conda
'conda', # bin/conda
'conda-env',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'Conda.psm1',
'conda-hook.ps1',
'conda.xsh',
'conda.csh',
'site-packages', # remove conda in site-packages dir
'conda.egg-link',
'easy-install.pth',
'conda.egg-info',
)
stderr = c.stderr.replace('no change', 'modified')
assert stderr.count('modified') == len(modified_files)
for fn in modified_files:
line = next(line for line in stderr.splitlines() if line.strip().endswith(fn))
assert line.strip().startswith('modified'), line
assert "unset CONDA_SHLVL" in c.stdout
def test_initialize_dev_bash(self):
with pytest.raises(CondaValueError):
initialize_dev('bash', conda_source_root=join('a', 'b', 'c'))
with env_vars({'CONDA_DRY_RUN': 'true', 'CONDA_VERBOSITY': '0'}, stack_callback=conda_tests_ctxt_mgmt_def_pol):
with tempdir() as conda_temp_prefix:
new_py = abspath(join(conda_temp_prefix, get_python_short_path()))
mkdir_p(dirname(new_py))
create_link(abspath(sys.executable), new_py, LinkType.hardlink if on_win else LinkType.softlink)
with captured() as c:
initialize_dev('bash', dev_env_prefix=conda_temp_prefix, conda_source_root=dirname(CONDA_PACKAGE_ROOT))
print(c.stdout)
print(c.stderr, file=sys.stderr)
if on_win:
modified_files = (
'conda.exe',
'conda-env.exe',
'conda-script.py',
'conda-env-script.py',
'conda.bat', # condabin/conda.bat
'conda.bat', # Library/bin/conda.bat
'_conda_activate.bat',
'rename_tmp.bat',
'conda_auto_activate.bat',
'conda_hook.bat',
'activate.bat',
'activate.bat',
'deactivate.bat',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'Conda.psm1',
'conda-hook.ps1',
'conda.xsh',
'conda.csh',
'site-packages', # remove conda in site-packages dir
'conda.egg-link',
'easy-install.pth',
'conda.egg-info',
)
else:
modified_files = (
'conda', # condabin/conda
'conda', # bin/conda
'conda-env',
'activate',
'deactivate',
'conda.sh',
'conda.fish',
'Conda.psm1',
'conda-hook.ps1',
'conda.xsh',
'conda.csh',
'site-packages', # remove conda in site-packages dir
'conda.egg-link',
'easy-install.pth',
'conda.egg-info',
)
stderr = c.stderr.replace('no change', 'modified')
assert stderr.count('modified') == len(modified_files)
for fn in modified_files:
line = next(line for line in stderr.splitlines() if line.strip().endswith(fn))
assert line.strip().startswith('modified'), line
assert "unset CONDA_SHLVL" in c.stdout