def calcdne(self):
"""Method for calculating surface Dirichlet normal energy and populating instance variables."""
# creation of dictionary of vertex keys and face values
self._get_vert_tri_dict()
# optional implicit smooth of mesh
if self.dosmooth == 1:
self.Mesh = pcopy(self.Mesh)
self.Mesh.vertices = implicitfair.smooth(self.Mesh.vertices, self.Mesh.faces, int(self.smoothit), float(self.smoothstep), self.vert_tri_dict)
if self.Mesh.vertices == "!":
print "Cholesky error"
return "!"
# creation of array of vertices per edge
self._get_edge_verts()
# list of boundary faces
self._get_boundary_faces()
# arrays of normalized face normals and vertex normals approximated from adjacent faces
self.vnormal, self.fnormal = normcore.computenormal(self.Mesh.vertices, self.Mesh.faces, self.Mesh.triverts, self.vert_tri_dict)
# array of e(p) and face area for polygons across mesh
self._energize_surface()
self._sumdne()
def calcopcr(self):
"""Method for calculating OPCR and associated variables from surface mesh. Calls internal methods."""
self.Mesh = pcopy(self.Mesh)
self.Mesh.vertices = self._centermesh(self.Mesh.vertices)
self.MeshRotated = pcopy(self.Mesh)
self._get_vert_tri_dict()
self.opc_list[0], self.patches_list[0], self.colormap_list[0] = self._get_opc(self.Mesh.vertices,
self.Mesh.faces,
self.Mesh.triverts)
for i in range(1,self.n_rotations):
self._rotatemesh()
self.opc_list[i], self.patches_list[i], self.colormap_list[i] = self._get_opc(self.MeshRotated.vertices,
self.MeshRotated.faces,
self.MeshRotated.triverts)
self.OPCR = average(self.opc_list)
def execute(self, stmt, arguments=None, namemapping=None, ignored=None):
"""Execute a statement.
Arguments:
- stmt: the statement to execute
- arguments: a mapping with the arguments. Default: None.
- namemapping: a mapping of names such that if stmt uses %(arg)s
and namemapping[arg]=arg2, the value arguments[arg2] is used
instead of arguments[arg]
- ignored: An ignored argument only present to accept the same
number of arguments as ConnectionWrapper.execute
"""
if namemapping and arguments:
arguments = pygrametl.copy(arguments, **namemapping)
else:
arguments = pcopy(arguments)
self.__queue.put((stmt, arguments))
def execute(self, stmt, arguments=None, namemapping=None, ignored=None):
"""Execute a statement.
Arguments:
- stmt: the statement to execute
- arguments: a mapping with the arguments. Default: None.
- namemapping: a mapping of names such that if stmt uses %(arg)s
and namemapping[arg]=arg2, the value arguments[arg2] is used
instead of arguments[arg]
- ignored: An ignored argument only present to accept the same
number of arguments as ConnectionWrapper.execute
"""
if namemapping and arguments:
arguments = pygrametl.copy(arguments, **namemapping)
else:
arguments = pcopy(arguments)
self.__queue.put((stmt, arguments))