def testSigma(self): unadjusted = sl.stouffer_liptak(self.pvals) sigma = np.eye(3) sigma[0,1] = sigma[1,0] = 0.9 sigma[2,1] = sigma[1,2] = 0.7 sigma[2,2] = sigma[1,2] = 0.5 sigma[2,0] = sigma[0,2] = 0.6 adjusted = sl.stouffer_liptak(self.pvals, sigma) self.assert_(adjusted['p'] > unadjusted['p'])
def testSigma(self): unadjusted = sl.stouffer_liptak(self.pvals) sigma = np.eye(3) sigma[0, 1] = sigma[1, 0] = 0.9 sigma[2, 1] = sigma[1, 2] = 0.7 sigma[2, 2] = sigma[1, 2] = 0.5 sigma[2, 0] = sigma[0, 2] = 0.6 adjusted = sl.stouffer_liptak(self.pvals, sigma) self.assert_(adjusted['p'] > unadjusted['p'])
def testSLOK(self): res = sl.stouffer_liptak(self.pvals) self.assert_(all(k in res for k in "OK p C".split()))