def write_partners(self):
annotations = cremi.Annotations(offset=self.offset)
syncounter = itertools.count(1)
for partner in self.get_partners():
preid = next(syncounter)
annotations.add_annotation(
preid,
"presynaptic_site",
tuple(p * r for p, r in zip(partner[0], (40.0, 4.0, 4.0))),
)
annotations.add_comment(
preid,
"preness: " + str(partner[2]) + ", postness: " +
str(partner[3]) + ", size: " + str(partner[4]),
)
postid = next(syncounter)
annotations.add_annotation(
postid,
"postsynaptic_site",
tuple(p * r for p, r in zip(partner[1], (40.0, 4.0, 4.0))),
)
annotations.add_comment(
postid,
"preness: " + str(partner[5]) + ", postness: " +
str(partner[6]) + ", size: " + str(partner[7]),
)
annotations.set_pre_post_partners(preid, postid)
self.cremi_file.write_annotations(annotations)
def write_partners(self):
annotations = cremi.Annotations(offset=self.offset)
syncounter = itertools.count(1)
for partner in self.get_partners():
preid = syncounter.next()
annotations.add_annotation(
preid, 'presynaptic_site',
tuple(p * r for p, r in zip(partner[0], (40., 4., 4.))))
annotations.add_comment(preid, ', size: ' + str(partner[2]))
postid = syncounter.next()
annotations.add_annotation(
postid, 'postsynaptic_site',
tuple(p * r for p, r in zip(partner[1], (40., 4., 4.))))
annotations.add_comment(postid, 'size: ' + str(partner[3]))
annotations.set_pre_post_partners(preid, postid)
self.cremi_file.write_annotations(annotations)