def plot(self, experiment, plot_name=None, **kwargs):
if experiment is None:
raise util.CytoflowViewError("No experiment specified")
if self.plotfacet and plot_name is not None:
experiment = experiment.subset(self.plotfacet, plot_name)
self.channels = []
self.scale = {}
for channel in self.channels_list:
self.channels.append(channel.channel)
self.scale[channel.channel] = channel.scale
RadvizView.plot(self, experiment, **kwargs)
if self.plotfacet and plot_name is not None:
plt.title("{0} = {1}".format(self.plotfacet, plot_name))
def get_notebook_code(self, idx):
view = RadvizView()
view.copy_traits(self, view.copyable_trait_names())
for channel in self.channels_list:
view.channels.append(channel.channel)
view.scale[channel.channel] = channel.scale
plot_params_str = traits_str(self.plot_params)
return dedent("""
{repr}.plot(ex_{idx}{plot}{plot_params})
""".format(repr=repr(view),
idx=idx,
plot=", plot_name = " +
repr(self.current_plot) if self.plot_names else "",
plot_params=", " +
plot_params_str if plot_params_str else ""))