def test_calls_monitor_scan_import_for_session(self, mock_http,
mock_monitor, det, records):
mock_http.return_value = self.mock_redcap_export()
rc_utils.create_from_request(det)
session = dashboard.models.Session.query.get((self.session[:-3], 1))
assert mock_monitor.called_once_with(session)
def test_adds_redcap_record_to_session(self, mock_http, mock_monitor, det,
records):
mock_http.return_value = self.mock_redcap_export()
session = dashboard.models.Session.query.get((self.session[:-3], 1))
assert session.redcap_record is None
rc_utils.create_from_request(det)
assert session.redcap_record is not None
assert session.redcap_record.record.comment == self.comment
def test_sets_event_id_of_redcap_record(self, mock_http, mock_monitor, det,
records):
mock_http.return_value = self.mock_redcap_export()
rc_utils.create_from_request(det)
session = dashboard.models.Session.query.get((self.session[:-3], 1))
assert session.redcap_record is not None
db_record = session.redcap_record.record
assert db_record.event_id == self.event_ids[self.event_name]
def test_det_with_different_version_causes_redcap_config_version_update(
self, mock_http, mock_monitor, det, records):
mock_http.return_value = self.mock_redcap_export()
redcap_config = dashboard.models.RedcapConfig.get_config(
project=self.pid, instrument=self.instrument, url=self.url)
assert redcap_config is not None
assert redcap_config.redcap_version != self.version
rc_utils.create_from_request(det)
assert redcap_config.redcap_version == self.version
def test_exception_raised_if_multiple_redcap_records_match(
self, mock_http, mock_monitor, det, records):
export_output = []
export_output.extend(self.redcap_records)
export_output.append({
"record": self.record_id,
"redcap_event_name": self.event_name
})
mock_http.return_value = self.mock_redcap_export(export_output)
with pytest.raises(dashboard.exceptions.RedcapException):
rc_utils.create_from_request(det)
def test_no_records_added_when_matching_redcap_config_not_found(
self, mock_http, mock_monitor, det, records):
det.form["project_id"] = 1111
assert det.form["project_id"] != self.pid
before_det = self.get_db_records()
rc_utils.create_from_request(det)
after_det = self.get_db_records()
assert mock_http.call_count == 0
for idx in range(len(before_det)):
assert before_det[idx] == after_det[idx]
def test_calls_monitor_scan_download_if_download_script_is_set(
self, mock_download, mock_http, mock_scan_monitor, det, records):
mock_http.return_value = self.mock_redcap_export()
study_site = dashboard.models.StudySite.query.get(("STUDY", "ABC"))
study_site.download_script = "/some/path/post_download.sh"
dashboard.models.db.session.add(study_site)
dashboard.models.db.session.commit()
rc_utils.create_from_request(det)
session = dashboard.models.Session.query.get((self.session[:-3], 1))
assert mock_download.called_once_with(session)
def test_adds_session_if_doesnt_exist(self, mock_http, mock_monitor, det,
records):
mock_http.return_value = self.mock_redcap_export()
timepoint = self.session[:-3]
session = dashboard.models.Session.query.get((timepoint, 1))
if session:
session.delete()
assert dashboard.models.Session.query.get((timepoint, 1)) is None
rc_utils.create_from_request(det)
session = dashboard.models.Session.query.get((timepoint, 1))
assert session is not None
def test_no_records_added_when_form_not_complete(self, mock_http,
mock_monitor, det,
dash_db):
det.form[self.completed_field] = "1"
for item in self.get_db_records():
assert item == [], "Error - Database not empty before test ran."
rc_utils.create_from_request(det)
assert mock_http.call_count == 0
for item in self.get_db_records():
assert item == [], "Error - New data was added to database."
def test_doesnt_fail_if_config_event_ids_not_set(self, mock_http,
mock_monitor, det,
records):
mock_http.return_value = self.mock_redcap_export()
# Delete the event_ids from config
rc = dashboard.models.RedcapConfig.query.get(1)
rc.event_ids = None
dashboard.models.db.session.add(rc)
dashboard.models.db.session.commit()
assert rc.event_ids is None
rc_utils.create_from_request(det)
record = dashboard.models.RedcapRecord.query.get(1)
assert record is not None
def test_updates_redcap_record_if_updates_on_server(
self, mock_http, mock_monitor, det, records):
mock_http.return_value = self.mock_redcap_export()
# Add a redcap record
rc_utils.create_from_request(det)
# Modify the comment on the 'server'
new_comment = "Scan was NOT ok."
new_record = self.redcap_records[0].copy()
new_record[self.comment_field] = new_comment
mock_http.return_value = self.mock_redcap_export([new_record])
# Resend the data entry trigger
rc_utils.create_from_request(det)
session = dashboard.models.Session.query.get((self.session[:-3], 1))
assert session is not None
assert session.redcap_record.record.comment == new_comment
def test_exception_raised_if_record_not_found_on_server(
self, mock_http, mock_monitor, det, records):
mock_http.return_value = self.mock_redcap_export([])
with pytest.raises(dashboard.exceptions.RedcapException):
rc_utils.create_from_request(det)
def test_raises_exception_when_malformed_request_received(
self, mock_http, mock_monitor, det, records):
del det.form["project_id"]
with pytest.raises(dashboard.exceptions.RedcapException):
rc_utils.create_from_request(det)