def run(self, unpack_src=False):
"""Common operations for extensions: unpacking sources, patching, ..."""
# unpack file if desired
if unpack_src:
targetdir = os.path.join(self.master.builddir, remove_unwanted_chars(self.name))
self.ext_dir = extract_file("%s" % self.src, targetdir, extra_options=self.unpack_options)
# patch if needed
if self.patches:
for patchfile in self.patches:
if not apply_patch(patchfile, self.ext_dir):
raise EasyBuildError("Applying patch %s failed", patchfile)
def run(self, unpack_src=False):
"""Common operations for extensions: unpacking sources, patching, ..."""
# unpack file if desired
if unpack_src:
targetdir = os.path.join(self.master.builddir, remove_unwanted_chars(self.name))
self.ext_dir = extract_file("%s" % self.src, targetdir, extra_options=self.unpack_options)
# patch if needed
if self.patches:
for patchfile in self.patches:
if not apply_patch(patchfile, self.ext_dir):
self.log.error("Applying patch %s failed" % patchfile)
def test_apply_patch(self):
""" Test apply_patch """
testdir = os.path.dirname(os.path.abspath(__file__))
tmpdir = self.test_prefix
path = ft.extract_file(os.path.join(testdir, 'sandbox', 'sources', 'toy', 'toy-0.0.tar.gz'), tmpdir)
toy_patch = os.path.join(testdir, 'sandbox', 'sources', 'toy', 'toy-0.0_typo.patch')
self.assertTrue(ft.apply_patch(toy_patch, path))
patched = ft.read_file(os.path.join(path, 'toy-0.0', 'toy.source'))
pattern = "I'm a toy, and very proud of it"
self.assertTrue(pattern in patched)
# trying the patch again should fail
self.assertErrorRegex(EasyBuildError, "Couldn't apply patch file", ft.apply_patch, toy_patch, path)
def test_apply_patch(self):
""" Test apply_patch """
testdir = os.path.dirname(os.path.abspath(__file__))
tmpdir = self.test_prefix
path = ft.extract_file(
os.path.join(testdir, 'sandbox', 'sources', 'toy',
'toy-0.0.tar.gz'), tmpdir)
toy_patch = os.path.join(testdir, 'sandbox', 'sources', 'toy',
'toy-0.0_typo.patch')
self.assertTrue(ft.apply_patch(toy_patch, path))
patched = ft.read_file(os.path.join(path, 'toy-0.0', 'toy.source'))
pattern = "I'm a toy, and very proud of it"
self.assertTrue(pattern in patched)
# trying the patch again should fail
self.assertErrorRegex(EasyBuildError, "Couldn't apply patch file",
ft.apply_patch, toy_patch, path)
def configure_step(self):
"""Apply coreutils patch from source and run configure"""
# 1.822.3 -> 8.22
coreutils_version = re.sub(r"^\d+.(\d+)(\d\d).\d+", r"\1.\2", self.version)
coreutils_patch = "coreutils-%s.patch" % coreutils_version
patch_path = os.path.join(self.builddir, "%s-%s" % (self.name, self.version), "patch", coreutils_patch)
if os.path.isfile(patch_path):
self.log.info("coreutils patch found at %s", patch_path)
else:
raise EasyBuildError("Could not find the patch for coreutils: %s", coreutils_patch)
coreutils_path = glob.glob(os.path.join(self.builddir, "coreutils-*"))
if not coreutils_path:
raise EasyBuildError("Could not find the coreutils directory")
if not apply_patch(patch_path, coreutils_path[0]):
raise EasyBuildError("Applying coreutils patch %s failed", coreutils_patch)
super(EB_mutil, self).configure_step()
def configure_step(self):
"""Apply coreutils patch from source and run configure"""
# 1.822.3 -> 8.22
coreutils_version = re.sub(r"^\d+.(\d+)(\d\d).\d+", r"\1.\2", self.version)
coreutils_patch = "coreutils-%s.patch" % coreutils_version
patch_path = os.path.join(self.builddir, "%s-%s" % (self.name, self.version), "patch", coreutils_patch)
if os.path.isfile(patch_path):
self.log.info("coreutils patch found at %s", patch_path)
else:
raise EasyBuildError("Could not find the patch for coreutils: %s", coreutils_patch)
coreutils_path = glob.glob(os.path.join(self.builddir, "coreutils-*"))
if not coreutils_path:
raise EasyBuildError("Could not find the coreutils directory")
if not apply_patch(patch_path, coreutils_path[0]):
raise EasyBuildError("Applying coreutils patch %s failed", coreutils_patch)
super(EB_mutil, self).configure_step()
def run(self):
"""Perform the actual Python package build/installation procedure"""
# extract_file
if not self.src:
self.log.error("No source found for Python package %s, required for installation. (src: %s)" % \
(self.name, self.src))
self.ext_dir = extract_file("%s" % self.src, "%s/%s" % (self.builddir, self.name), extra_options=self.unpack_options)
# patch if needed
if self.patches:
for patchfile in self.patches:
if not apply_patch(patchfile, self.ext_dir):
self.log.error("Applying patch %s failed" % patchfile)
# configure, build_step, test, make install
self.configure_step()
self.build_step()
self.test_step()
self.install_step()
