def setFacetedNavigation(folder, request, force=False):
subtyper = getMultiAdapter((folder, request), name=u'faceted_subtyper')
if (subtyper.is_faceted or not subtyper.can_enable) and not force: return
subtyper.enable()
urlTool = plone.api.portal.get_tool(name='portal_url')
path = '/' + '/'.join(urlTool.getRelativeContentPath(folder))
criteria = ICriteria(folder)
for cid in criteria.keys():
criteria.delete(cid)
criteria.add(
'checkbox', 'left', 'default',
title=u'Organ',
hidden=False,
index='indicatedBodySystems',
operator='or',
vocabulary=u'eke.biomarker.IndicatedOrgansVocabulary',
count=False,
maxitems=0,
sortreversed=False,
hidezerocount=False,
)
criteria.add('resultsperpage', 'bottom', 'default', title='Results per page', hidden=True, start=0, end=50, step=5, default=20)
criteria.add('sorting', 'bottom', 'default', title='Sort on', hidden=True, default='sortable_title')
criteria.add(
'checkbox', 'bottom', 'default',
title='Obj provides',
hidden=True,
index='object_provides',
operator='or',
vocabulary=u'eea.faceted.vocabularies.ObjectProvides',
default=[IBiomarker.__identifier__],
count=False,
maxitems=0,
sortreversed=False,
hidezerocount=False
)
criteria.add('path', 'bottom', 'default', title='Path Search', hidden=True, index='path', default=path)
criteria.add('text', 'top', 'default', title=u'Search', hidden=False, index='SearchableText', count=False,
onlyallelements=True)
IFacetedLayout(folder).update_layout('faceted_biomarkers_view')
noLongerProvides(folder, IHidePloneLeftColumn)
noLongerProvides(folder, IHidePloneRightColumn)
def installFacetedNavigation(obj, event):
if not ISecretomeFolder.providedBy(obj): return
factory = getToolByName(obj, 'portal_factory')
if factory.isTemporary(obj): return
request = obj.REQUEST
subtyper = getMultiAdapter((obj, request), name=u'faceted_subtyper')
if subtyper.is_faceted or not subtyper.can_enable: return
subtyper.enable()
criteria = ICriteria(obj)
for cid in criteria.keys():
criteria.delete(cid)
criteria.add('resultsperpage', 'bottom', 'default', title='Results per page', hidden=True, start=0, end=50, step=5,
default=20)
criteria.add(
'checkbox', 'bottom', 'default',
title='Obj provides',
hidden=True,
index='object_provides',
operator='or',
vocabulary=u'eea.faceted.vocabularies.ObjectProvides',
default=[IGeneProtein.__identifier__],
count=False,
maxitems=0,
sortreversed=False,
hidezerocount=False
)
criteria.add('debug', 'top', 'default', title='Debug Criteria', user='******')
criteria.add(
'checkbox', 'left', 'default',
title=u'Databases',
hidden=False,
index='databaseNames',
operator='or',
vocabulary=u'eke.secretome.DatabaseNamesVocabulary',
count=False,
maxitems=0,
sortreversed=False,
hidezerocount=False
)
IFacetedLayout(obj).update_layout(u'faceted_secretome_view')
noLongerProvides(obj, IHidePloneLeftColumn)
def _removeGroupsOfMatter(self):
"""Remove MeetingCategory.groupsOfMatter field and related."""
logger.info('Removing MeetingCategory.groupsOfMatter...')
brains = self.portal.portal_catalog(meta_type='MeetingCategory')
for brain in brains:
cat = brain.getObject()
if hasattr(cat, 'groupsOfMatter'):
cat.setGroupsInCharge(cat.groupsOfMatter)
delattr(cat, 'groupsOfMatter')
else:
self._already_migrated()
return
# remove portal_catalog index 'groupsOfMatter'
self.removeUnusedIndexes(indexes=['groupsOfMatter'])
# remove faceted filter
for cfg in self.tool.objectValues('MeetingConfig'):
# enable includeGroupsInChargeDefinedOnCategory so indexed groupsInCharge is correct
cfg.setIncludeGroupsInChargeDefinedOnCategory(True)
obj = cfg.searches.searches_items
# update vocabulary for relevant filters
criteria = ICriteria(obj)
if criteria.get('c50'):
criteria.delete('c50')
# unselect 'c50' from dashboard filters and select 'c23'
dashboardItemsListingsFilters = list(cfg.getDashboardItemsListingsFilters())
if 'c50' in dashboardItemsListingsFilters:
dashboardItemsListingsFilters.remove('c50')
dashboardItemsListingsFilters.append('c23')
cfg.setDashboardItemsListingsFilters(dashboardItemsListingsFilters)
dashboardMeetingAvailableItemsFilters = list(cfg.getDashboardMeetingAvailableItemsFilters())
if 'c50' in dashboardMeetingAvailableItemsFilters:
dashboardMeetingAvailableItemsFilters.remove('c50')
dashboardMeetingAvailableItemsFilters.append('c23')
cfg.setDashboardMeetingAvailableItemsFilters(dashboardMeetingAvailableItemsFilters)
dashboardMeetingLinkedItemsFilters = list(cfg.getDashboardMeetingLinkedItemsFilters())
if 'c50' in dashboardMeetingLinkedItemsFilters:
dashboardMeetingLinkedItemsFilters.remove('c50')
dashboardMeetingLinkedItemsFilters.append('c23')
cfg.setDashboardMeetingLinkedItemsFilters(dashboardMeetingLinkedItemsFilters)
logger.info('Done.')
def createMembersListSearchPage(portal):
'''Create the members list page'''
# New in profile version 1 (software version 1.0.2):
request = portal.REQUEST
if 'members-list' in portal.objectIds():
portal.manage_delObjects('members-list')
membersList = portal[portal.invokeFactory('Folder', 'members-list')]
membersList.setTitle('Members List')
membersList.setDescription('A directory of the people that comprise EDRN.')
membersList.setExcludeFromNav(True)
_doPublish(membersList, getToolByName(portal, 'portal_workflow'))
subtyper = getMultiAdapter((membersList, request), name=u'faceted_subtyper')
subtyper.enable()
layout = IFacetedLayout(membersList)
layout.update_layout('folder_listing')
criteria = ICriteria(membersList)
for cid in criteria.keys():
criteria.delete(cid)
criteria.add('resultsperpage', 'bottom', 'default', title='Results per page', hidden=True, start=0, end=50, step=5, default=20)
criteria.add('sorting', 'bottom', 'default', title='Sort on', hidden=True, default='sortable_title')
criteria.add(
'checkbox', 'bottom', 'default',
title='Obj provides',
hidden=True,
index='object_provides',
operator='or',
vocabulary=u'eea.faceted.vocabularies.ObjectProvides',
default=[IPerson.__identifier__],
count=False,
maxitems=0,
sortreversed=False,
hidezerocount=False
)
criteria.add(
'checkbox', 'left', 'default',
title='Investigator',
hidden=False,
index='piUID',
operator='or',
vocabulary=u'eke.site.PrincipalInvestigators',
count=False,
maxitems=4,
sortreversed=False,
hidezerocount=False
)
criteria.add(
'checkbox', 'left', 'default',
title='Type',
index='investigatorStatus',
operator='or',
vocabulary=u'eke.site.NotPeons',
count=True,
maxitems=0,
sortreversed=False,
hidezerocount=False
)
criteria.add(
'checkbox', 'left', 'default',
title='Institution',
hidden=False,
index='siteName',
operator='or',
vocabulary=u'eke.site.SitesNames',
count=True,
maxitems=4,
sortreversed=False,
hidezerocount=False
)
criteria.add(
'checkbox', 'left', 'default',
title='Member Type',
hidden=False,
index='memberType',
operator='or',
vocabulary=u'eke.site.MemberType',
count=True,
maxitems=20,
sortreversed=False,
hidezerocount=False
)
criteria.add('criteria', 'top', 'default', title='Current Search')
membersList.reindexObject()
def setFacetedNavigation(folder, request):
subtyper = getMultiAdapter((folder, request), name=u'faceted_subtyper')
if subtyper.is_faceted or not subtyper.can_enable: return
subtyper.enable()
urlTool = getToolByName(folder, 'portal_url')
path = '/' + '/'.join(urlTool.getRelativeContentPath(folder))
criteria = ICriteria(folder)
for cid in criteria.keys():
criteria.delete(cid)
criteria.add('resultsperpage', 'bottom', 'default', title='Results per page', hidden=True, start=0, end=50, step=5, default=20)
criteria.add('sorting', 'bottom', 'default', title='Sort on', hidden=True, default='sortable_title')
criteria.add(
'checkbox', 'left', 'default',
title='System',
hidden=False,
index='getSystemName',
operator='or',
vocabulary=u'eke.specimens.vocab.SystemNames',
count=False,
maxitems=0,
sortreversed=False,
hidezerocount=False,
)
criteria.add(
'checkbox', 'left', 'default',
title='Diagnosis',
hidden=False,
index='diagnosis',
operator='or',
vocabulary=u'eke.specimens.vocab.Diagnoses',
count=False,
maxitems=0,
sortreversed=False,
hidezerocount=False,
)
criteria.add(
'checkbox', 'left', 'default',
title='Storage',
hidden=False,
index='getStorageType',
operator='or',
vocabulary=STORAGE_VOCAB_NAME,
count=False,
maxitems=5,
sortreversed=False,
hidezerocount=False,
)
criteria.add(
'checkbox', 'left', 'default',
title='Collection Type',
hidden=False,
index='collectionType',
operator='or',
vocabulary=COLLECTION_VOCAB_NAME,
count=False,
maxitems=5,
sortreversed=False,
hidezerocount=False,
)
criteria.add(
'checkbox', 'left', 'default',
title='Site',
hidden=False,
index='siteName',
operator='or',
vocabulary=u'eke.specimens.vocab.SitesWithSpecimens',
count=False,
maxitems=5,
sortreversed=False,
hidezerocount=False,
)
criteria.add(
'checkbox', 'bottom', 'default',
title='Obj provides',
hidden=True,
index='object_provides',
operator='or',
vocabulary=u'eea.faceted.vocabularies.ObjectProvides',
default=[ISpecimenSet.__identifier__],
count=False,
maxitems=0,
sortreversed=False,
hidezerocount=False
)
criteria.add(
'text', 'center', 'default',
title='Open Search',
hidden=False,
index='SearchableText',
)
criteria.add('path', 'bottom', 'default', title='Path Search', hidden=True, index='path', default=path)
IFacetedLayout(folder).update_layout('faceted_specimens_view')
alsoProvides(folder, IHidePloneRightColumn)
def createMembersListSearchPage(portal):
'''Create the members list page'''
# New in profile version 1 (software version 1.0.2):
request = portal.REQUEST
if 'members-list' in portal.objectIds():
portal.manage_delObjects('members-list')
membersList = portal[portal.invokeFactory('Folder', 'members-list')]
membersList.setTitle('Members List')
membersList.setDescription('A directory of the people that comprise EDRN.')
membersList.setExcludeFromNav(True)
_doPublish(membersList, getToolByName(portal, 'portal_workflow'))
subtyper = getMultiAdapter((membersList, request),
name=u'faceted_subtyper')
subtyper.enable()
layout = IFacetedLayout(membersList)
layout.update_layout('folder_listing')
criteria = ICriteria(membersList)
for cid in criteria.keys():
criteria.delete(cid)
criteria.add('resultsperpage',
'bottom',
'default',
title='Results per page',
hidden=True,
start=0,
end=50,
step=5,
default=20)
criteria.add('sorting',
'bottom',
'default',
title='Sort on',
hidden=True,
default='sortable_title')
criteria.add('checkbox',
'bottom',
'default',
title='Obj provides',
hidden=True,
index='object_provides',
operator='or',
vocabulary=u'eea.faceted.vocabularies.ObjectProvides',
default=[IPerson.__identifier__],
count=False,
maxitems=0,
sortreversed=False,
hidezerocount=False)
criteria.add('checkbox',
'left',
'default',
title='Investigator',
hidden=False,
index='piUID',
operator='or',
vocabulary=u'eke.site.PrincipalInvestigators',
count=False,
maxitems=4,
sortreversed=False,
hidezerocount=False)
criteria.add('checkbox',
'left',
'default',
title='Type',
index='investigatorStatus',
operator='or',
vocabulary=u'eke.site.NotPeons',
count=True,
maxitems=0,
sortreversed=False,
hidezerocount=False)
criteria.add('checkbox',
'left',
'default',
title='Institution',
hidden=False,
index='siteName',
operator='or',
vocabulary=u'eke.site.SitesNames',
count=True,
maxitems=4,
sortreversed=False,
hidezerocount=False)
criteria.add('checkbox',
'left',
'default',
title='Member Type',
hidden=False,
index='memberType',
operator='or',
vocabulary=u'eke.site.MemberType',
count=True,
maxitems=20,
sortreversed=False,
hidezerocount=False)
criteria.add('criteria', 'top', 'default', title='Current Search')
membersList.reindexObject()
