def convert_xml(self, doi_id, xml_file, filenames, new_filenames):
# Register namespaces
xmlio.register_xmlns()
root, doctype_dict = xmlio.parse(xml_file, return_doctype_dict=True)
soup = self.article_soup(xml_file)
if parser.is_poa(soup):
# Capitalise subject group values in article categories
root = self.subject_group_convert_in_xml(root)
pub_date = None
if parser.pub_date(soup) is None:
# add the published date to the XML
pub_date = self.get_pub_date_if_missing(doi_id)
root = self.add_pub_date_to_xml(doi_id, pub_date, root)
else:
pub_date = parser.pub_date(soup)
if parser.volume(soup) is None:
# Get the pub-date year to calculate the volume
year = pub_date[0]
volume = year - 2011
self.add_volume_to_xml(doi_id, volume, root)
# set the article-id, to overwrite the v2, v3 value if present
root = self.set_article_id_xml(doi_id, root)
# if pdf file then add self-uri tag
if parser.self_uri(soup) is not None and len(
parser.self_uri(soup)) == 0:
for filename in new_filenames:
if filename.endswith('.pdf'):
root = self.add_self_uri_to_xml(doi_id, filename, root)
# if ds.zip file is there, then add it to the xml
poa_ds_zip_file = None
for f in new_filenames:
if f.endswith('.zip'):
poa_ds_zip_file = f
if poa_ds_zip_file:
root = self.add_poa_ds_zip_to_xml(doi_id, poa_ds_zip_file,
root)
# Start the file output
reparsed_string = xmlio.output(root,
type=None,
doctype_dict=doctype_dict)
# Remove extra whitespace here for PoA articles to clean up and one VoR file too
reparsed_string = reparsed_string.replace("\n", '').replace("\t", '')
f = open(xml_file, 'wb')
f.write(reparsed_string)
f.close()
def convert_xml(self, doi_id, xml_file, filenames, new_filenames):
# Register namespaces
xmlio.register_xmlns()
root, doctype_dict = xmlio.parse(xml_file, return_doctype_dict=True)
soup = self.article_soup(xml_file)
if parser.is_poa(soup):
# Capitalise subject group values in article categories
root = self.subject_group_convert_in_xml(root)
pub_date = None
if parser.pub_date(soup) is None:
# add the published date to the XML
pub_date = self.get_pub_date_if_missing(doi_id)
root = self.add_pub_date_to_xml(doi_id, pub_date, root)
else:
pub_date = parser.pub_date(soup)
if parser.volume(soup) is None:
# Get the pub-date year to calculate the volume
year = pub_date[0]
volume = year - 2011
self.add_volume_to_xml(doi_id, volume, root)
# set the article-id, to overwrite the v2, v3 value if present
root = self.set_article_id_xml(doi_id, root)
# if pdf file then add self-uri tag
if parser.self_uri(soup) is not None and len(parser.self_uri(soup)) == 0:
for filename in new_filenames:
if filename.endswith('.pdf'):
root = self.add_self_uri_to_xml(doi_id, filename, root)
# if ds.zip file is there, then add it to the xml
poa_ds_zip_file = None
for f in new_filenames:
if f.endswith('.zip'):
poa_ds_zip_file = f
if poa_ds_zip_file:
root = self.add_poa_ds_zip_to_xml(doi_id, poa_ds_zip_file, root)
# Start the file output
reparsed_string = xmlio.output(root, type=None, doctype_dict=doctype_dict)
# Remove extra whitespace here for PoA articles to clean up and one VoR file too
reparsed_string = reparsed_string.replace("\n", '').replace("\t", '')
f = open(xml_file, 'wb')
f.write(reparsed_string)
f.close()
def items_to_match(self, soup):
graphics = parser.graphics(soup)
media = parser.media(soup)
self_uri = parser.self_uri(soup)
inline_graphics = parser.inline_graphics(soup)
return graphics + media + self_uri + inline_graphics
