def testinInsertionsSegment(self):
rawStartAtom = "ATOM 1 N ALA L 1T 95.966 23.494 131.088 1.00 78.27 N "
rawInResidueAtom = "ATOM 21 C GLU L 1Q 90.085 26.425 128.760 1.00 63.99 C "
rawMiddleAtom = "ATOM 158 N CYS L 1 81.822 27.897 122.945 1.00 35.25 N "
rawEndAtom = "ATOM 271 N LYS L 14A 86.041 46.599 116.234 1.00 45.79 N "
rawoutOfsegmentAtom = "ATOM 378 O GLY L 14N 92.287 43.790 140.820 1.00101.24 O "
rawoutOfsegmentAtom2 = "ATOM 378 O GLY L 15N 92.287 43.790 140.820 1.00101.24 O "
startAtom = Atom(rawStartAtom)
inResidueAtom = Atom(rawInResidueAtom)
middleAtom = Atom(rawMiddleAtom)
endAtom = Atom(rawEndAtom)
outOfsegmentAtom = Atom(rawoutOfsegmentAtom)
outOfsegmentAtom2 = Atom(rawoutOfsegmentAtom2)
start = 1
stop = 14
startInsertion = "T"
stopInsertion = "M"
startOrder = False
stopOrder = True
assert startAtom.inInsertionsSegment(start, stop, startInsertion, stopInsertion, startOrder, stopOrder) == True
assert (
inResidueAtom.inInsertionsSegment(start, stop, startInsertion, stopInsertion, startOrder, stopOrder) == True
)
assert middleAtom.inInsertionsSegment(start, stop, startInsertion, stopInsertion, startOrder, stopOrder) == True
assert endAtom.inInsertionsSegment(start, stop, startInsertion, stopInsertion, startOrder, stopOrder) == True
assert (
outOfsegmentAtom.inInsertionsSegment(start, stop, startInsertion, stopInsertion, startOrder, stopOrder)
== False
)
assert (
outOfsegmentAtom2.inInsertionsSegment(start, stop, startInsertion, stopInsertion, startOrder, stopOrder)
== False
)
