import sys import os import experiments.registration.split_tools as st if __name__=="__main__": req_dir = os.path.dirname(os.path.realpath(__file__)) required_files = [req_dir+'/dipyreg.py', req_dir+'/job_syn_em_indirect.sh'] st.split_script(sys.argv, required_files, 'indirect')
'mod1', action = 'store', metavar = 'mod1', help = '''Modality identifier. It will be added as suffix to the filename of each input file, e.g. "", "_t2", "_pd" ''') parser.add_argument( 'mod2', action = 'store', metavar = 'mod2', help = '''Modality identifier. It will be added as suffix to the filename of each input file, e.g. "", "_t2", "_pd" ''') parser.add_argument( 'action', action = 'store', metavar = 'action', help = '''Any of ["s", "s2", "c", "o", "u"] to split all pairs, split corresponding pairs, clean, collect or submit, respectively''') parser.add_argument( 'names_from', action = 'store', metavar = 'names_from', help = '''Text file containing the input file names''') parser.add_argument( '-nt', '--names_to', action = 'store', metavar = 'names_to', help = '''Text file containing the input file names''') if __name__=="__main__": req_dir = os.path.dirname(os.path.realpath(__file__)) required_files = [req_dir+'/job_ants2_mi.sh'] params = parser.parse_args() params.mod1 st.split_script(["", params.action, params.names_from, params.names_to], required_files, 'multi', params.mod1, params.mod2)
import sys import os import experiments.registration.split_tools as st if __name__=="__main__": req_dir = os.path.dirname(os.path.realpath(__file__)) required_files = [req_dir+'/dipyreg_affine.py', req_dir+'/job_affine_mi.sh'] st.split_script(sys.argv, required_files)
import sys import os import experiments.registration.split_tools as st if __name__ == "__main__": req_dir = os.path.dirname(os.path.realpath(__file__)) required_files = [req_dir + "/dipyreg.py", req_dir + "/job_syn_poly_indirect.sh"] st.split_script(sys.argv, required_files, "indirect")