def module_teardown_setup_project_setup():
try:
expipe.delete_project(PROJECT_ID, remove_all_childs=True)
except NameError:
pass
project = expipe.require_project(PROJECT_ID)
from expipe_plugin_cinpla.main import CinplaPlugin
CinplaPlugin().attach_to_cli(cli)
# make surgery action
run_command(['register-surgery', pytest.RAT_ID,
'--weight', '500',
'--birthday', '21.05.2017',
'--procedure', 'implantation',
'-d', '21.01.2017T14:40',
'-a', 'mecl', 1.9,
'-a', 'mecr', 1.8])
# init adjusment
run_command(['adjust', pytest.RAT_ID,
'-a', 'mecl', 50,
'-a', 'mecr', 50,
'-d', 'now',
'--init'], inp='y')
yield project
from click.testing import CliRunner
import quantities as pq
import os.path as op
from expipe_plugin_cinpla.axona import AxonaPlugin
from expipe_plugin_cinpla.main import CinplaPlugin
expipe.ensure_testing()
@click.group()
@click.pass_context
def cli(ctx):
pass
AxonaPlugin().attach_to_cli(cli)
CinplaPlugin().attach_to_cli(cli)
def run_command(command_list, inp=None):
result = CliRunner().invoke(cli, command_list, input=inp)
if result.exit_code != 0:
print(result.output)
raise result.exception
return result
def test_axona(module_teardown_setup_project_setup):
project = module_teardown_setup_project_setup
#
action_id = pytest.RAT_ID + '-311013-03'
data_path = op.join(expipe.settings['data_path'],