def test_parse_delta_file(self): from nasp_objects import GenomeStatus find_duplicates.run_nucmer_on_reference(self.nucmer_path, self.fasta.name) dups_data = GenomeStatus() find_duplicates.parse_delta_file(self.delta, dups_data) print(dups_data)
def test_run_nucmer_on_reference(self): find_duplicates.run_nucmer_on_reference(self.nucmer_path, self.fasta.name)