def pull_moves_mutation(protein,ind,mut_prob):
ind_to_mut = deepcopy(ind[0])
#we start applying the mutation from the end of the protein untill we reach the element 1, as the algorithm instructs
for i in range(len(ind_to_mut) - 2,0,-1):
if random() < mut_prob:
l_pos = find_l_pos(i, ind_to_mut)
if l_pos in ind_to_mut:
continue
c_pos = find_c_pos(i, ind_to_mut,l_pos)
if c_pos == ind_to_mut[i-1]:
ind_to_mut[i] = l_pos
elif c_pos not in ind_to_mut:
ind_to_mut[i] = l_pos
ind_to_mut[i - 1] = c_pos
ind_to_mut = repair_conformation(i,ind_to_mut,ind[0])
if check_ind_validity(ind_to_mut) == False:
return (ind[0],fitness_function(protein,ind[0]))
return (ind_to_mut,fitness_function(protein,ind_to_mut))
def evaluate_ind(protein,ind):
return fitness_function(protein,ind[0])