class SpaceUrlForm(Form):
url = TextField(
lazy_gettext('Space URL'),
[validators.Length(min=6, max=200),
validators.URL()],
description=lazy_gettext("Drop here the URL of the Space."),
default="http://graasp.epfl.ch/#item=space_1234")
class RegistrationForm(Form):
full_name = TextField(lazy_gettext('School name'),
[validators.Required(),
validators.Length(min=4)] +
forms.SCHOOL_FULL_NAME_VALIDATORS,
description=lazy_gettext('School name.'))
short_name = TextField(
lazy_gettext('Short name'),
[validators.Required()] + forms.SCHOOL_SHORT_NAME_VALIDATORS,
description=lazy_gettext(
'Short name (lower case, all letters, dots and numbers).'))
url = TextField(lazy_gettext('School URL'), [
validators.Length(min=6, max=200),
validators.URL(),
validators.Required()
],
description=lazy_gettext('Address of your school.'))
user_full_name = TextField(
lazy_gettext('User name'),
[validators.Required(),
validators.Length(min=4)] + forms.USER_FULL_NAME_VALIDATORS,
description=lazy_gettext('Your name and last name.'))
user_login = TextField(lazy_gettext('Login'), [validators.Required()] +
forms.USER_LOGIN_DEFAULT_VALIDATORS,
description=lazy_gettext(
'Your new login (you can create more later).'))
user_password = PasswordField(
lazy_gettext('Password'),
[validators.Required()] + forms.USER_PASSWORD_DEFAULT_VALIDATORS,
description=lazy_gettext('Your access password.'))
class job_form(Form):
vcf = FileField(u'VCF File', [
make_optional('uri'),
validators.required(message=u'You need to supply a VCF file')
])
uri = TextField(u'VCF URI', [
make_optional('vcf'),
validators.URL(
message=
u'You must specify a valid URI (e.g. "localhost" is not allowed)')
])
min_variant_quality = IntegerField(u'Minimum Variant Quality',
[validators.NumberRange(min=0, max=99)],
default=30)
min_quality_depth = IntegerField(u'Minimum Quality by Depth',
[validators.NumberRange(min=0)],
default=10)
homozyg_window_size = IntegerField(u'Homozygosity Window Size',
[validators.NumberRange(min=0)],
default=1000)
heterozyg_calls = IntegerField(u'Heterozygous Calls allowed in window',
[validators.NumberRange(min=0)],
default=10)
def validate_vcf(form, field):
m = re.match(
'^.*\.(' + '|'.join(app.config['UPLOAD_FORMAT_EXTENSIONS']) + ')$',
field.data.filename, re.IGNORECASE)
if not m:
raise ValidationError(
u'You must upload a VCF file (compressed or uncompressed)')
class MarkForm(Form):
referrer = HiddenField([validators.URL(require_tld=False)])
title = TextField('Title',
[validators.Length(min=0, max=255)],
filters=[strip_filter])
url = TextField('URL',
[validators.Length(min=4, max=512),
validators.URL(require_tld=False,
message='Not a valid URL')],
filters=[strip_filter])
type = RadioField('Type',
coerce=unicode,
choices=[('bookmark', 'Bookmark'), ('feed', 'Feed')],
default='bookmark')
tags = TextField('Tags',
[validators.Length(min=0, max=255)],
filters=[strip_filter])
class ProfileForm(Form):
next = HiddenField()
name = TextField(_('Username'))
email = TextField(_('email'), [validators.Email()])
website = TextField(_('URL'), [validators.URL()])
location = TextField(_('Location'), [validators.Length(max=100)])
bio = TextAreaField(_('bio'), [validators.Length(max=200)])
submit = SubmitField(_('Save'))
class BookmarkForm(Form):
title = TextField('title', [validators.Length(min=0, max=255)],
filters=[strip_filter])
url = TextField('url', [
validators.Length(min=4, max=512),
validators.URL(require_tld=False, message='Not a valid URL')
],
filters=[strip_filter])
tags = TextField('tags', [validators.Length(min=0, max=255)],
filters=[strip_filter])
class AddForm(RetrospectiveForm):
name = TextField(lazy_gettext('Name'),
validators=[validators.Required()],
default='RLMS name',
description=lazy_gettext("Name of the RLMS"))
url = TextField(
lazy_gettext('URL'),
validators=[validators.URL(require_tld=False),
validators.Required()],
default='http://rlms-address/',
description=lazy_gettext('Main URL of the RLMS'))
location = TextField(
lazy_gettext('Location'),
validators=[validators.Required()],
default='City, Country',
description=lazy_gettext("City and country where the RLMS is hosted"))
publicly_available = BooleanField(
lazy_gettext('Public'),
default=False,
description=lazy_gettext(
"Do you want to provide access to this laboratory publicly?"))
public_identifier = TextField(
lazy_gettext('Public identifier'),
default='',
description=lazy_gettext(
"If publicly available, under what identifier?"))
default_autoload = BooleanField(
lazy_gettext('Autoload'),
default=False,
description=lazy_gettext("Should these labs be loaded by default?"))
def __init__(self, **kwargs):
default_name = getattr(
self, 'DEFAULT_NAME',
getattr(self, 'DEFAULT_PUBLIC_IDENTIFIER', None))
if default_name:
kwargs.setdefault('name', default_name)
default_location = getattr(self, 'DEFAULT_LOCATION', None)
if default_location:
kwargs.setdefault('location', default_location)
default_url = getattr(self, 'DEFAULT_URL', None)
if default_url:
kwargs.setdefault('url', default_url)
default_publicly_available = getattr(self,
'DEFAULT_PUBLICLY_AVAILABLE',
None)
if default_publicly_available is not None:
kwargs.setdefault('publicly_available', default_publicly_available)
default_public_identifier = getattr(self, 'DEFAULT_PUBLIC_IDENTIFIER',
'')
if default_public_identifier:
kwargs.setdefault('public_identifier', default_public_identifier)
default_autoload = getattr(self, 'DEFAULT_AUTOLOAD', None)
if default_autoload is not None:
kwargs.setdefault('default_autoload', default_autoload)
super(AddForm, self).__init__(**kwargs)