def test_analyze_single_sample(self):
wsp_path = "examples/data/8_color_data_set/8_color_ICS_simple.wsp"
sample_id = '101_DEN084Y5_15_E01_008_clean.fcs'
sample_grp = 'DEN'
fks = Session(copy.deepcopy(test_samples_8c_full_set))
fks.import_flowjo_workspace(wsp_path, ignore_missing_files=True)
sample_ids = fks.get_group_sample_ids(sample_grp)
self.assertEqual(len(sample_ids), 3)
fks.analyze_samples(sample_grp, sample_id=sample_id)
report = fks.get_group_report(sample_grp)
self.assertEqual(report['sample'].nunique(), 1)
def test_analyze_single_sample(self):
wsp_path = "examples/8_color_data_set/8_color_ICS_simple.wsp"
fcs_path = "examples/8_color_data_set/fcs_files"
sample_id = '101_DEN084Y5_15_E01_008_clean.fcs'
sample_grp = 'DEN'
fks = Session(fcs_samples=fcs_path)
fks.import_flowjo_workspace(wsp_path, ignore_missing_files=True)
sample_ids = fks.get_group_sample_ids(sample_grp)
self.assertEqual(len(sample_ids), 3)
fks.analyze_samples(sample_grp, sample_id=sample_id)
report = fks.get_group_report(sample_grp)
self.assertEqual(report.index.get_level_values('sample').nunique(), 1)
