示例#1
0
文件: ftp.py 项目: jekoie/JekoieDemo
def get_ftp():
    ftp_path = getattr(settings, 'FTP_PATH', 'ftp://*****:*****@192.168.60.70/soft/测试文件')
    parsed = urlparse(ftp_path)
    ftp = FTPHost(parsed.hostname, parsed.username, parsed.password)
    ftp.chdir(parsed.path)

    return ftp
示例#2
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文件: ftp.py 项目: jekoie/JekoieDemo
class RFTP:
    def __init__(self):
        ftp_path = getattr(settings, 'FTP_PATH', 'ftp://*****:*****@192.168.60.70/soft/测试文件')
        parsed = urlparse(ftp_path)
        self.hostname = parsed.hostname
        self.username = parsed.username
        self.password = parsed.password
        self.path = parsed.path
        self.ftp = None

    def get_ftp(self):
        if self.ftp is None:
            self.ftp = FTPHost(self.hostname, self.username, self.password)
            self.ftp.chdir(self.path)
        else:
            try:
                self.ftp.chdir(self.path)
            except Exception as e:
                self.ftp = FTPHost(self.hostname, self.username, self.password)
                self.ftp.chdir(self.path)
        return self.ftp

    def remove_file(self, name):
        try:
            self.ftp.remove(name)
        except Exception as e:
            self.ftp.rmdir(name)
示例#3
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def fopen(top):
    """Open file.
    
    Returns file handle specified by path
    """
    
    (hostname,path,user,password) = parseuri(top)
    host = FTPHost(hostname,user,password)
    
    return host.open(path)
示例#4
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文件: ftp.py 项目: jekoie/JekoieDemo
 def get_ftp(self):
     if self.ftp is None:
         self.ftp = FTPHost(self.hostname, self.username, self.password)
         self.ftp.chdir(self.path)
     else:
         try:
             self.ftp.chdir(self.path)
         except Exception as e:
             self.ftp = FTPHost(self.hostname, self.username, self.password)
             self.ftp.chdir(self.path)
     return self.ftp
示例#5
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    def __init__(self, *args, **kwargs):

        kw = {}
        if "expire" in kwargs:
            kw["expire"] = kwargs["expire"]
            del kwargs["expire"]
        if "size" in kwargs:
            kw["size"] = kwargs["size"]
            del kwargs["size"]
        self.cache = Cache(**kw)

        FTPHost.__init__(self, *args, **kwargs)
        self.CWD = None
        self.setcwd()
示例#6
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def autoupdateftp():
    ftp_host, ftp_name, ftp_pwd, ftp_path, keep_update_dirs, exclude_dirs, root_dir = read_conf(
    )
    from ftputil import FTPHost
    from ftputil.error import FTPError
    from ftputil.error import TemporaryError
    try:
        ftp_s = FTPHost(ftp_host, ftp_name, ftp_pwd)
    except FTPError as e:
        print('cannot connect ftp sever ---- ' + str(e))
        exit(0)
    if ftp_path != '/':
        ftp_s.chdir(ftp_path)
    try:
        ftp_s.keep_alive()
    except TemporaryError as e:
        print('Program execute exception ---- ' + str(e))
        exit(0)
    import os
    if keep_update_dirs == '/':
        if exclude_dirs != '':
            download_file(ftp_s, keep_update_dirs, root_dir, exclude_dirs)
        else:
            download_file(ftp_s, keep_update_dirs, root_dir)
    else:
        sdirs = keep_update_dirs.split(',')
        for dir in sdirs:
            download_file(ftp_s, dir.strip(), root_dir + os.sep + dir.strip())

    ftp_s.close()
示例#7
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def get_host():
    c = current_app.config
    session_factory = FTP_TLS if c['FTP_USE_TLS'] else FTP
    return FTPHost(c['FTP_ADDRESS'],
                   c['FTP_USERNAME'],
                   c['FTP_PASSWORD'],
                   session_factory=session_factory)
示例#8
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def stat(top):
    """Get file information (stats)
    
    For the file given by path returns a 10-tuple
    
        mode, ino, dev, nlink, uid, gid, *size, atime, *mtime, *ctime
    
    (Only attributes preceeded with * are currently required, 
    all others may be set 0 if not determinable)
        
    """
    
    (hostname,path,user,password) = parseuri(top)
    host = FTPHost(hostname,user,password)
    
    return host.stat(path)
示例#9
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    def listDirectory(self, dir: str, host: ftputil.FTPHost):

        exc: ftputil.error.PermanentError

        try:
            return host.listdir(dir)
        except ftputil.error.PermanentError as exc:  # noqa: F841
            raise BackendError(str(exc))
示例#10
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    def run(self):

        try:
            with FTPHost(self.hostname, self.username, self.password) as ftp:
                for folder in ftp.listdir('.'):
                    log.info('Found remote folder: {}'.format(folder))
        except Exception as e:
            print(e)
示例#11
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def move_nas(local_dir, remote_dir):
    with FTPHost('10.100.4.102', 'root', 'originp123') as ftp_host:
        for root, dirs, files in os.walk(local_dir, topdown=False):
            for name in files:
                local_file = os.path.join(root, name)
                remote_file = remote_dir + '/' + name
                ftp_host.upload(local_file, remote_file)
                os.remove(local_file)
示例#12
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def install_server_configuration(host, username, password):
    with FTPHost(host, username, password) as remote:
        if remote.path.isfile('config_inc.php.bak'):
            remote.remove('config_inc.php.bak')
        if remote.path.isfile('config_inc.php'):
            remote.rename('config_inc.php', 'config_inc.php.bak')
        remote.upload(
            os.path.join(os.path.dirname(__file__),
                         "recources/config_inc.php"), 'config_inc.php')
示例#13
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def walk(top):
    """Directory tree generator.

    For each directory in the directory tree rooted at top (including top
    itself, but excluding '.' and '..'), yields a 3-tuple

        dirpath, dirnames, filenames

    dirpath is a string, the path to the directory.  dirnames is a list of
    the names of the subdirectories in dirpath (excluding '.' and '..').
    filenames is a list of the names of the non-directory files in dirpath.
    Note that the names in the lists are just names, with no path components.
    To get a full path (which begins with top) to a file or directory in
    dirpath, do os.path.join(dirpath, name).
    """
    
    (hostname,path,user,password) = parseuri(top)
    host = FTPHost(hostname,user,password)
    
    for dir in host.walk(path):
        yield dir
示例#14
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    def _dir(self, path):

        path = self.path.normcase(path)
        try:
            lines = self.cache[path]
        except KeyError:
            self.logger.debug("cache miss: %s" % path)
            lines = FTPHost._dir(self, path)
            self.cache[path] = lines
        else:
            self.logger.debug("cache hit: %s" % path)
        return lines
示例#15
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def recursively_download_ftp(host, username, password, ftp_root_path,
                             local_dest_dir):

    # Data preparation
    ftp_root_path = sub('\\\\', '/', ftp_root_path)
    ftp_root_path = sub('^[/]*', '/', ftp_root_path)
    ftp_root_path = sub('/$', '', ftp_root_path)

    print('Recursively downloading from ftp://{0}:{1}@{2}{3} to {4}'.format(
        username, password, host, ftp_root_path, local_dest_dir))

    host = FTPHost(host, username, password)
    recursive_file_walk = host.walk(ftp_root_path, topdown=True, onerror=None)
    for folder_path, _, folder_files in recursive_file_walk:

        print('REMOTE DIR\t', folder_path)
        short_folder_path = sub('^' + ftp_root_path, '', folder_path)
        local_folder_path = local_dest_dir
        if short_folder_path:
            local_folder_path = path.join(local_dest_dir, sub('^/', '',
                                                              short_folder_path))
            if not path.exists(local_folder_path):
                makedirs(local_folder_path)
        print('LOCAL DIR\t', local_folder_path)

        if len(folder_files) > 0:
            for folder_file in folder_files:
                remote_path = folder_path + '/' + folder_file
                print('REMOTE FILE\t', remote_path)
                local_file_path = path.join(local_folder_path, folder_file)
                local_file_path = path.abspath(local_file_path)
                print('LOCAL FILE\t', local_file_path)
                host.download_if_newer(remote_path, local_file_path)
        else:
            print('NO FILES')

        print('')

    host.close
示例#16
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def move_nas(local_dir, remote_dir):
    with FTPHost('10.100.4.102', 'root', 'originp123') as ftp_host:
        for root, dirs, files in os.walk(local_dir, topdown=False):
            for name in files:
                file_year = root.split('/')[-1]
                remote_fdir = os.path.join(remote_dir, file_year)
                if not ftp_host.path.exists(remote_fdir):
                    ftp_host.mkdir(remote_fdir)
                local_file = os.path.join(root, name)
                ftp_host.upload(local_file, os.path.join(remote_fdir, name))
                os.remove(local_file)

            for name in dirs:
                os.rmdir(os.path.join(root, name))
示例#17
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 def get_ftputil_client(self):
     if self.protocol == "sftp":
         raise TypeError(
             "ftputil does not manage sftp protocol, please use another ftp client"
         )
     if self.host == "":
         raise ValueError(
             "ftp account is not configured, can't initialize ftputil client"
         )
     password = self.get_password()
     session_factory = ftputil.session.session_factory(port=self.port)
     return FTPHost(self.host,
                    self.login,
                    password,
                    session_factory=session_factory)
示例#18
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文件: ena.py 项目: Xiuying/illumitag
 def upload_to_ena(self):
     # Connect #
     print "Connecting..."
     ftp = FTPHost(ftp_server, ftp_login, str(ftp_password))
     # Gzip if not there yet #
     if not self.raw_gz.exists:
         self.raw.fwd.gzip_to(self.p.raw_forward_gz)
         self.raw.rev.gzip_to(self.p.raw_reverse_gz)
     # Make directory #
     directory = '/ILLUMITAG/run%03d/pool%02d/sample%02d/'
     directory = directory % (self.pool.run_num, self.pool.num, self.num)
     print "Making directories..."
     ftp.makedirs(directory)
     # Upload #
     base_path = directory + 'run%03d_pool%02d_sample%02d_{}_reads.fastq.gz'
     base_path = base_path % (self.pool.run_num, self.pool.num, self.num)
     print "Uploading forward..."
     ftp.upload(self.p.raw_forward_gz, base_path.format("forward"))
     print "Uploading reverse..."
     ftp.upload(self.p.raw_reverse_gz, base_path.format("reverse"))
     # Return #
     ftp.close()
示例#19
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文件: sra.py 项目: Xiuying/illumitag
 def upload_to_sra(self, verbose=True):
     """They have an FTP site where you should drop the files first"""
     # Print #
     if verbose: print self.s.short_name + ' (' + self.s.name + ')'
     # Connect #
     if verbose: print "Connecting..."
     ftp = FTPHost(ftp_server, ftp_login, str(ftp_password))
     # Gzip if not there yet #
     if not self.s.raw_gz.exists:
         self.s.raw.fwd.gzip_to(self.s.p.raw_forward_gz)
         self.s.raw.rev.gzip_to(self.s.p.raw_reverse_gz)
     # Make directory #
     if verbose: print "Making directories..."
     ftp.makedirs(self.directory)
     # Upload #
     base_path = self.directory + self.base_name
     if verbose: print "Uploading forward..."
     ftp.upload(self.s.p.raw_forward_gz, base_path.format("forward"))
     if verbose: print "Uploading reverse..."
     ftp.upload(self.s.p.raw_reverse_gz, base_path.format("reverse"))
     # Return #
     ftp.close()
示例#20
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 def upload_to_sra(self):
     # Print #
     print self.s.short_name
     # Connect #
     print "Connecting..."
     ftp = FTPHost(sra.ftp_server, sra.ftp_login, str(sra.ftp_password))
     # Make directory #
     print "Making directories..."
     ftp.makedirs(self.directory)
     # Upload #
     dest_path = self.directory + self.name
     print "Uploading to '%s' (%s)..." % (dest_path, self.s.p.raw_sff.size)
     ftp.upload(self.s.p.raw_sff, dest_path)
     # Return #
     ftp.close()
示例#21
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文件: blast.py 项目: xapple/seqsearch
def install_blast(base_dir):
    """Deprecated, look into 'home_linux/setup/bioinfo_tools'
    On Ubuntu: sudo apt-get install ncbi-blast+
    """
    # Default location #
    if base_dir is None: base_dir = os.environ.get('HOME', '/') + '/programs/blast/'
    # Download from FTP #
    ftp_url = "ftp.ncbi.nlm.nih.gov"
    ftp_dir = "/blast/executables/blast+/LATEST/"
    pattern = 'ncbi-blast-*+-src.zip'
    ftp = FTPHost(ftp_url, "anonymous")
    ftp.chdir(ftp_dir)
    files = ftp.listdir(self.ftp.curdir)
    ftp.download(source, dest)
示例#22
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def move_nas(local_dir, remote_dir):
    fs_reports = search_fs_reports(local_dir)
    db_reports = search_db_reports(fs_reports)
    src_files = pick_files(fs_reports, db_reports)
    with FTPHost('10.100.4.102', 'root', 'originp123') as ftp_host:
        for local_file in src_files:
            *_, file_year, filename = local_file.split(os.sep)
            remote_fdir = os.path.join(remote_dir, file_year)
            if not ftp_host.path.exists(remote_fdir):
                ftp_host.mkdir(remote_fdir)
            ftp_host.upload(local_file, os.path.join(remote_fdir, filename))
            os.remove(local_file)

    # 删除空目录
    for it in local_dir:
        dir_path = os.path.join(local_dir, it)
        try:
            os.rmdir(dir_path)
        except OSError:
            pass
示例#23
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def _append_todo(start_date, sidecar_dir, ftp_site, ftp_dir, listing,
                 original_dirs_list):
    try:
        with FTPHost(ftp_site, 'anonymous', '@anonymous') as ftp_host:
            dirs = ftp_host.listdir(ftp_dir)
            for entry in dirs:
                entry_fqn = '{}/{}'.format(ftp_dir, entry)
                entry_stats = ftp_host.stat(entry_fqn)
                if entry_stats.st_mtime >= start_date:
                    if stat.S_ISDIR(entry_stats.st_mode):
                        # True - it's a directory, follow it down later
                        if entry_fqn not in original_dirs_list:
                            listing[entry_fqn] = [True, entry_stats.st_mtime]
                    elif entry.endswith('.fits') or entry.endswith('.fits.gz'):
                        # False - it's a file, just leave it in the list
                        listing[entry_fqn] = [False, entry_stats.st_mtime]
                        logging.debug(f'Adding entry {entry_fqn}')
            ftp_host.close()

        temp_listing = {}
        for entry, value in listing.items():
            if value[0] and entry not in original_dirs_list:  # is a directory
                temp_listing.update(
                    _append_todo(start_date, sidecar_dir, ftp_site, entry,
                                 temp_listing, original_dirs_list))
                _sidecar(entry, value, sidecar_dir)
                original_dirs_list[entry] = value[1]
                logging.info(f'Added results for {entry}')

        _cache(temp_listing, sidecar_dir)
        listing.update(temp_listing)

    except Exception as e:
        logging.error(e)
        logging.debug(traceback.format_exc())
        raise mc.CadcException(f'Could not list {ftp_dir} on {ftp_site}')
    return listing
示例#24
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    def run(self):
        if form.stop_sync is not True:
            for folder in self.list_of_folders:
                log.info(
                    'Attempting to retrieve file list from {}'.format(folder))

                try:
                    with FTPHost(self.hostname, self.username,
                                 self.password) as ftp:
                        for root, dirs, files in ftp.walk(folder):
                            for file in files:
                                form.list_transfer.addItem(root + '/' + file)
                except Exception as e:
                    log.exception(e)

        for i in range(0, form.list_transfer.count()):

            if form.stop_sync is not True:

                remote_file = Path(form.list_transfer.takeItem(0).text())
                local_file = Path(self.download_path + '/' + str(remote_file))

                # create folder for file
                try:
                    os.chdir(self.download_path)
                    os.makedirs(str(local_file.parent))
                    log.info('Created local folder: {}'.format(
                        str(local_file.parent)))
                except FileExistsError as e:
                    log.warning('{} already exists, skipping..'.format(
                        str(local_file.parent)))

                # enter the local folder
                try:
                    os.chdir(str(local_file.parent))
                except Exception as e:
                    log.exception(e)

                # enter the remote folder

                log.info('Attempting to download: {}'.format(
                    str(local_file.parts[-1])))

                try:
                    with ftp2(self.hostname, self.username,
                              self.password) as ftp:
                        for i in remote_file.parts[0:-1]:
                            ftp.cwd(str(i))
                        fh = open(str(local_file), 'wb')
                        ftp.retrbinary(
                            'RETR {}'.format(str(remote_file.parts[-1])),
                            fh.write)
                        fh.close()

                        log.info('Download Complete: {}'.format(
                            str(local_file)))

                        form.list_finished_transfer.addItem(str(local_file))
                except Exception as e:
                    log.exception(e)

            else:
                form.list_transfer.clear()
                form.action_add_folder.setEnabled(True)
                form.action_download_path.setEnabled(True)
                form.action_load_settings.setEnabled(True)
                form.action_save_settings.setEnabled(True)
                form.action_find_remote_folders.setEnabled(True)
                form.action_sync.setEnabled(True)
                form.action_stop_sync.setEnabled(False)
                form.input_hostname.setEnabled(True)
                form.input_username.setEnabled(True)
                form.input_password.setEnabled(True)
示例#25
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 def mkdir(self, path, mode=None):
     path = self.path.abspath(path)
     FTPHost.mkdir(self, path, mode)
     self._invalidate_dir(path)
示例#26
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if __name__ == "__main__":
    ftp_host = None
    try:
        while True:
            server = input("Set server address: ")
            if server == "":
                server = "192.168.0.81"
            user = input("User: "******"":
                user = "******"
            password = input("Password: "******"":
                password = "******"
            try:
                ftp_host = FTPHost(server, user, password)
                break
            except error.PermanentError as e:
                print(e)

        actions(ftp_host)

    except KeyboardInterrupt:
        print("Force exit...")
        if ftp_host:
            ftp_host.close()
        # names = ftp_host.listdir(ftp_host.curdir)
    # for name in names:
    #     if ftp_host.path.isfile(name):
    #         ftp_host.download(name, name)  # remote, local
    # # Make a new directory and copy a remote file into it.
示例#27
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 def rmdir(self, path):
     FTPHost.rmdir(self, path)
     self.cache.invalidate(self.path.normcase(
         self.path.abspath(path)))
     self._invalidate_dir(path)
示例#28
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    def getStats(self, path: str, host: ftputil.FTPHost) -> Any:

        return host.stat(path)
示例#29
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external_deps = ['ftputil', 'easysnmp', 'dateutil']
cisco_miburl = urlparse("ftp://ftp.cisco.com/pub/mibs/v2/v2.tar.gz")
mibs_dest = '/usr/share/snmp/mibs'

try:
    for dep in external_deps:
        imp.find_module(dep)
except ImportError:
    deplist = ", ".join(external_deps)
    print "Unmet dependencies, the following external dependencies are required: {}".format(
        deplist)

from ftputil import FTPHost  # noqa

print "Downloading required mibs..."
with FTPHost(cisco_miburl.netloc, 'anonymous', 'anonymous') as host:
    if host.path.isfile(cisco_miburl.path):
        tempfile = mkstemp(suffix='.tar.gz')[1]
        host.download(cisco_miburl.path, tempfile)
        print "Unpacking tarball..."
        tar = tarfile.open(tempfile)
        tar.extractall()
        tar.close()
        os.unlink(tempfile)
        print "Installing MIBs..."
        for mib in os.listdir("./auto/mibs/v2"):
            if not mib.endswith(".my"):
                continue
            srcmib = "auto/mibs/v2/{}".format(mib)
            destmib = "{}/{}".format(mibs_dest, mib)
            if os.path.exists(destmib):
示例#30
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 def ftp(self):
     """If the data is to be obtained by FTP here is the ftputil object."""
     ftp = FTPHost(self.ftp_url, "anonymous")
     ftp.chdir(self.ftp_dir)
     return ftp
示例#31
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 def rename(self, source, target):
     FTPHost.rename(self, source, target)
     self._invalidate_dir(source)
     self._invalidate_dir(target)
示例#32
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 def file(self, path, mode='r'):
     path = self.path.abspath(path)
     ret = FTPHost.file(self, path, mode)
     if 'w' in mode:
         self._invalidate_dir(path)
     return ret
示例#33
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def restore_server_configuration(host, username, password):
    with FTPHost(host, username, password) as remote:
        if remote.path.isfile('config_inc.php.bak'):
            if remote.path.isfile('config_inc.php'):
                remote.remove('config_inc.php')
            remote.rename('config_inc.php.bak', 'config_inc.php')
示例#34
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 def chdir(self, path):
     FTPHost.chdir(self, path)
     self.setcwd()
示例#35
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 def setcwd(self):
     """
     Update cached working directory.
     """
     self.CWD = self.path.normpath(FTPHost.getcwd(self))
     self.logger.info("New cwd: %s" % self.CWD)
示例#36
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rmtdir = '/modelos/io/produtos/MERGE'  # diretorio remoto

for d in days:

    year = d[:4]

    binfile = 'prec_{0}.bin'.format(d)
    ctlfile = 'prec_{0}.ctl'.format(d)

    locbinfile = '{0}/{1}/{2}'.format(locdir, year, binfile)
    locctlfile = '{0}/{1}/{2}'.format(locdir, year, ctlfile)

    if not os.path.exists(locbinfile):

        msg = 'File not found: {0}'.format(locbinfile)
        print(msg)

        rmtbinfile = '{0}/{1}/{2}'.format(rmtdir, year, binfile)
        rmtctlfile = '{0}/{1}/{2}'.format(rmtdir, year, ctlfile)

        host = FTPHost(hostnm, usernm, passwd)

        host.download(rmtbinfile, locbinfile)  # remoto, local
        host.download(rmtctlfile, locctlfile)

    else:

        msg = 'File already exists: {0}'.format(locbinfile)
        print(msg)

示例#37
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 def remove(self, path):
     FTPHost.remove(self, path)
     self._invalidate_dir(path)
示例#38
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 def ftp(self):
     """If the data is to be obtained by FTP, here is the ftputil object."""
     from ftputil import FTPHost
     ftp = FTPHost(self.ftp_url, "anonymous")
     ftp.chdir(self.ftp_dir)
     return ftp