import sys
sys.path.insert(1,'/galaxy-central')
sys.path.insert(1,'/galaxy-central/lib')
from scripts.db_shell import *
from galaxy.util.bunch import Bunch
from galaxy.security import GalaxyRBACAgent
from sqlalchemy.orm import sessionmaker
from sqlalchemy import *
import argparse
bunch = Bunch( **globals() )
engine = create_engine('postgres://*****:*****@localhost:5432/galaxy')
bunch.session = sessionmaker(bind=engine)
# For backward compatibility with "model.context.current"
bunch.context = sessionmaker(bind=engine)
security_agent = GalaxyRBACAgent( bunch )
security_agent.sa_session = sa_session
def add_user(email, password, key=None):
"""
Add Galaxy User.
From John https://gist.github.com/jmchilton/4475646
"""
query = sa_session.query( User ).filter_by( email=email )
if query.count() > 0:
return query.first()
else:
User.use_pbkdf2 = False
user = User(email)
# FROM https://github.com/bgruening/docker-galaxy-stable/blob/master/galaxy/create_galaxy_user.py
from scripts.db_shell import *
from galaxy.util.bunch import Bunch
from galaxy.security import GalaxyRBACAgent
from sqlalchemy.orm import sessionmaker
from sqlalchemy import *
import argparse
bunch = Bunch(**globals())
#engine = create_engine('postgres://*****:*****@localhost:5432/galaxy')
engine = create_engine(
'sqlite:///home/vagrant/galaxy/database/universe.sqlite')
bunch.session = sessionmaker(bind=engine)
# For backward compatibility with "model.context.current"
bunch.context = sessionmaker(bind=engine)
security_agent = GalaxyRBACAgent(bunch)
security_agent.sa_session = sa_session
def add_user(email, password, key=None):
"""
Add Galaxy User.
From John https://gist.github.com/jmchilton/4475646
"""
query = sa_session.query(User).filter_by(email=email)
if query.count() > 0:
return query.first()
else:
user = User(email)
user.set_password_cleartext(password)
sa_session.add(user)
