Python workflow_request_to_run_config示例

示例#1

文件： run.py 项目： xingyongma/galaxy

 def subworkflow_invoker(self, trans, step, use_cached_job=False):
     subworkflow_invocation = self._subworkflow_invocation(step)
     workflow_run_config = workflow_request_to_run_config(trans, subworkflow_invocation)
     subworkflow_progress = self.subworkflow_progress(subworkflow_invocation, step, workflow_run_config.param_map)
     subworkflow_invocation = subworkflow_progress.workflow_invocation
     return WorkflowInvoker(
         trans,
         workflow=subworkflow_invocation.workflow,
         workflow_run_config=workflow_run_config,
         progress=subworkflow_progress,
     )

示例#2

文件： run.py 项目： lappsgrid-incubator/Galaxy

 def subworkflow_invoker(self, trans, step, use_cached_job=False):
     subworkflow_invocation = self._subworkflow_invocation(step)
     workflow_run_config = workflow_request_to_run_config(trans, subworkflow_invocation)
     subworkflow_progress = self.subworkflow_progress(subworkflow_invocation, step, workflow_run_config.param_map)
     subworkflow_invocation = subworkflow_progress.workflow_invocation
     return WorkflowInvoker(
         trans,
         workflow=subworkflow_invocation.workflow,
         workflow_run_config=workflow_run_config,
         progress=subworkflow_progress,
     )

示例#3

 def schedule(self, workflow_invocation):
     workflow = workflow_invocation.workflow
     history = workflow_invocation.history
     request_context = context.WorkRequestContext(
         app=self.app, history=history,
         user=history.user)  # trans-like object not tied to a web-thread.
     workflow_run_config = run_request.workflow_request_to_run_config(
         request_context, workflow_invocation)
     run.schedule(
         trans=request_context,
         workflow=workflow,
         workflow_run_config=workflow_run_config,
         workflow_invocation=workflow_invocation,
     )

示例#4

文件： core.py 项目： AAFC-MBB/galaxy-1

 def schedule( self, workflow_invocation ):
     workflow = workflow_invocation.workflow
     history = workflow_invocation.history
     request_context = context.WorkRequestContext(
         app=self.app,
         history=history,
         user=history.user
     )  # trans-like object not tied to a web-thread.
     workflow_run_config = run_request.workflow_request_to_run_config(
         request_context,
         workflow_invocation
     )
     run.schedule(
         trans=request_context,
         workflow=workflow,
         workflow_run_config=workflow_run_config,
         workflow_invocation=workflow_invocation,
     )