def test_hamming(self):
def f1(): fHammingDistance()("Pattern 1", "Pattern")
def f2(): fHammingDistance()("Pattern", "Pattern 2")
def f3(): fHammingDistance()(None, "Pattern 2")
def f4(): fHammingDistance()(None, None)
def f5(): fHammingDistance()("pattern", None)
self.assertRaises(AssertionError, f1)
self.assertRaises(AssertionError, f2)
self.assertRaises(AssertionError, f3)
self.assertRaises(AssertionError, f4)
self.assertRaises(AssertionError, f5)
self.assertEqual(fHammingDistance()("Pattern 1", "Pattern 2"), 1)
self.assertEqual(fHammingDistance()("Pattern", "Pattern"), 0)
self.assertEqual(fHammingDistance()("", ""), 0)
em = [ [ 1, 0, 0, 0, 0, 0, 0 ],
[ 0, 1, 0, 0, 0, 0, 0 ],
[ 0, 0, 2, 0, 0, 0, 0 ],
[ 0, 0, 0, 3, 0, 0, 0 ],
[ 0, 0, 0, 0, 4, 0, 0 ],
[ 0, 0, 0, 0, 0, 4, 0 ],
[ 0, 0, 0, 0, 0, 0, 4 ] ]
m = fHammingDistance().fill_matrix("abcdefg", "cbdrtfg", DistanceMatrix())
for row in range(len(em)):
for col in range(len(em[row])):
self.assertEqual(em[row][col], m.get(row, col))
def test_hamming(self):
def f1():
fHammingDistance()("Pattern 1", "Pattern")
def f2():
fHammingDistance()("Pattern", "Pattern 2")
def f3():
fHammingDistance()(None, "Pattern 2")
def f4():
fHammingDistance()(None, None)
def f5():
fHammingDistance()("pattern", None)
self.assertRaises(AssertionError, f1)
self.assertRaises(AssertionError, f2)
self.assertRaises(AssertionError, f3)
self.assertRaises(AssertionError, f4)
self.assertRaises(AssertionError, f5)
self.assertEqual(fHammingDistance()("Pattern 1", "Pattern 2"), 1)
self.assertEqual(fHammingDistance()("Pattern", "Pattern"), 0)
self.assertEqual(fHammingDistance()("", ""), 0)
em = [[1, 0, 0, 0, 0, 0, 0], [0, 1, 0, 0, 0, 0, 0],
[0, 0, 2, 0, 0, 0, 0], [0, 0, 0, 3, 0, 0, 0],
[0, 0, 0, 0, 4, 0, 0], [0, 0, 0, 0, 0, 4, 0],
[0, 0, 0, 0, 0, 0, 4]]
m = fHammingDistance().fill_matrix("abcdefg", "cbdrtfg",
DistanceMatrix())
for row in range(len(em)):
for col in range(len(em[row])):
self.assertEqual(em[row][col], m.get(row, col))
def f5():
fHammingDistance()("pattern", None)
def f4():
fHammingDistance()(None, None)
def f3():
fHammingDistance()(None, "Pattern 2")
def f2():
fHammingDistance()("Pattern", "Pattern 2")
def f1():
fHammingDistance()("Pattern 1", "Pattern")
def f5(): fHammingDistance()("pattern", None)
self.assertRaises(AssertionError, f1)
def f4(): fHammingDistance()(None, None)
def f5(): fHammingDistance()("pattern", None)
def f3(): fHammingDistance()(None, "Pattern 2") def f4(): fHammingDistance()(None, None)
def f2(): fHammingDistance()("Pattern", "Pattern 2")
def f3(): fHammingDistance()(None, "Pattern 2")
def f1(): fHammingDistance()("Pattern 1", "Pattern")
def f2(): fHammingDistance()("Pattern", "Pattern 2")