def run(self, args):
"""Run 'create' subcommand."""
optparser = CreateOptions(go_args=args,
envvar_prefix=self.envvar_prefix,
usage=self.usage_txt)
options = optparser.options
if not validate_pbs_option(options):
sys.stderr.write('Missing config options. Exiting.\n')
return 1
label = options.label
if not hc.validate_label(label, hc.known_cluster_labels()):
sys.exit(1)
if not hc.validate_hodconf_or_dist(options.hodconf, options.dist):
sys.exit(1)
try:
j = PbsHodJob(optparser)
hc.report_cluster_submission(label)
j.run()
jobs = j.state()
hc.post_job_submission(label, jobs, optparser.options.workdir)
except StandardError as err:
self._log_and_raise(err)
return 0
def run(self, args):
"""Run 'create' subcommand."""
optparser = CreateOptions(go_args=args, envvar_prefix=self.envvar_prefix, usage=self.usage_txt)
options = optparser.options
if not validate_pbs_option(options):
sys.stderr.write('Missing config options. Exiting.\n')
return 1
label = options.label
if not hc.validate_label(label, hc.known_cluster_labels()):
sys.exit(1)
if not hc.validate_hodconf_or_dist(options.hodconf, options.dist):
sys.exit(1)
try:
j = PbsHodJob(optparser)
hc.report_cluster_submission(label)
j.run()
jobs = j.state()
hc.post_job_submission(label, jobs, optparser.options.workdir)
except StandardError as err:
self._log_and_raise(err)
return 0
def run(self, args):
"""Run 'create' subcommand."""
optparser = CreateOptions(go_args=args, envvar_prefix=self.envvar_prefix, usage=self.usage_txt)
options = optparser.options
if not validate_pbs_option(options):
sys.stderr.write('Missing config options. Exiting.\n')
return 1
label = options.label
if not hc.validate_label(label, hc.known_cluster_labels()):
sys.exit(1)
if not hc.validate_hodconf_or_dist(options.hodconf, options.dist):
sys.exit(1)
try:
j = PbsHodJob(optparser)
hc.report_cluster_submission(label)
j.run()
jobs = j.state()
hc.post_job_submission(label, jobs, optparser.options.workdir)
return 0
except StandardError as e:
fancylogger.setLogFormat(fancylogger.TEST_LOGGING_FORMAT)
fancylogger.logToScreen(enable=True)
_log.raiseException(e.message)
def run(self, args):
"""Run 'batch' subcommand."""
optparser = BatchOptions(go_args=args,
envvar_prefix=self.envvar_prefix,
usage=self.usage_txt)
options = optparser.options
if not validate_pbs_option(options):
sys.stderr.write('Missing config options. Exiting.\n')
return 1
if optparser.options.script is None:
sys.stderr.write('Missing script. Exiting.\n')
return 1
# resolve script path to absolute path
optparser.options.script = os.path.abspath(optparser.options.script)
if not os.path.exists(optparser.options.script):
sys.stderr.write(
"Specified script does not exist: %s. Exiting.\n" %
optparser.options.script)
return 1
# make sure script is executable
cur_perms = os.stat(optparser.options.script)[stat.ST_MODE]
if not (cur_perms & stat.S_IXUSR):
print "Specified script %s is not executable yet, fixing that..." % optparser.options.script
os.chmod(optparser.options.script, cur_perms | stat.S_IXUSR)
label = options.label
if not hc.validate_label(label, hc.known_cluster_labels()):
sys.exit(1)
if not hc.validate_hodconf_or_dist(options.hodconf, options.dist):
sys.exit(1)
try:
j = PbsHodJob(optparser)
hc.report_cluster_submission(label)
j.run()
jobs = j.state()
hc.post_job_submission(label, jobs, optparser.options.workdir)
except StandardError as err:
self._log_and_raise(err)
return 0
def run(self, args):
"""Run 'batch' subcommand."""
optparser = BatchOptions(go_args=args, envvar_prefix=self.envvar_prefix, usage=self.usage_txt)
options = optparser.options
if not validate_pbs_option(options):
sys.stderr.write('Missing config options. Exiting.\n')
return 1
if optparser.options.script is None:
sys.stderr.write('Missing script. Exiting.\n')
return 1
# resolve script path to absolute path
optparser.options.script = os.path.abspath(optparser.options.script)
if not os.path.exists(optparser.options.script):
sys.stderr.write("Specified script does not exist: %s. Exiting.\n" % optparser.options.script)
return 1
# make sure script is executable
cur_perms = os.stat(optparser.options.script)[stat.ST_MODE]
if not (cur_perms & stat.S_IXUSR):
print "Specified script %s is not executable yet, fixing that..." % optparser.options.script
os.chmod(optparser.options.script, cur_perms|stat.S_IXUSR)
label = options.label
if not hc.validate_label(label, hc.known_cluster_labels()):
sys.exit(1)
if not hc.validate_hodconf_or_dist(options.hodconf, options.dist):
sys.exit(1)
try:
j = PbsHodJob(optparser)
hc.report_cluster_submission(label)
j.run()
jobs = j.state()
hc.post_job_submission(label, jobs, optparser.options.workdir)
return 0
except StandardError as e:
fancylogger.setLogFormat(fancylogger.TEST_LOGGING_FORMAT)
fancylogger.logToScreen(enable=True)
_log.raiseException(e.message)
def test_validate_hodconf_or_dist(self):
with patch('hod.cluster.resolve_config_paths'):
self.assertTrue(hc.validate_hodconf_or_dist('a', 'b'))
with patch('hod.cluster.resolve_config_paths', side_effect=ValueError):
self.assertFalse(hc.validate_hodconf_or_dist('a', 'b'))
def test_validate_hodconf_or_dist(self):
with patch('hod.cluster.resolve_config_paths'):
self.assertTrue(hc.validate_hodconf_or_dist('a', 'b'))
with patch('hod.cluster.resolve_config_paths', side_effect=ValueError):
self.assertFalse(hc.validate_hodconf_or_dist('a', 'b'))