def show_export_dialog(self):
"""
Shows the ExportObjectInfoDialog and calls the operators export_object_data method
"""
# Late imports here, so we don't accidentally import PyQt during headless mode.
from ilastik.widgets.exportObjectInfoDialog import ExportObjectInfoDialog
from ilastik.widgets.progressDialog import ProgressDialog
dimensions = self.get_raw_shape()
feature_names = self.get_feature_names()
op = self.get_exporting_operator()
settings, selected_features = op.get_table_export_settings()
filename = None
if settings is not None and 'file path' in settings:
filename = settings['file path']
dialog = ExportObjectInfoDialog(dimensions,
feature_names,
selected_features=selected_features,
title=self.get_export_dialog_title(),
filename=filename)
if not dialog.exec_():
return (None, None)
settings = dialog.settings()
selected_features = list(
dialog.checked_features()
) # returns a generator, but that's inconvenient because it can't be serialized.
return settings, selected_features
def show_export_dialog(self):
"""
Shows the ExportObjectInfoDialog and calls the operators export_object_data method
"""
# Late imports here, so we don't accidentally import PyQt during headless mode.
from ilastik.widgets.exportObjectInfoDialog import ExportObjectInfoDialog
from ilastik.widgets.progressDialog import ProgressDialog
dimensions = self.get_raw_shape()
feature_names = self.get_feature_names()
dialog = ExportObjectInfoDialog(dimensions, feature_names)
if not dialog.exec_():
return
settings = dialog.settings()
selected_features = dialog.checked_features()
from ilastik.widgets.progressDialog import ProgressDialog
progress = ProgressDialog(["Feature Data", "Labeling Rois", "Raw Image", "Exporting"])
progress.set_busy(True)
progress.show()
gui = {
"dialog": progress,
"ok": partial(progress.safe_popup, "information", "Information", "Export successful!"),
"cancel": partial(progress.safe_popup, "information", "Information", "Export cancelled!"),
"fail": partial(progress.safe_popup, "critical", "Critical", "Export failed!")
}
self.topLevelOperatorView.export_object_data(settings, selected_features, gui)
def show_export_dialog(self):
"""
Shows the ExportObjectInfoDialog and calls the operators export_object_data method
"""
# Late imports here, so we don't accidentally import PyQt during headless mode.
from ilastik.widgets.exportObjectInfoDialog import ExportObjectInfoDialog
from ilastik.widgets.progressDialog import ProgressDialog
dimensions = self.get_raw_shape()
feature_names = self.get_feature_names()
op = self.get_exporting_operator()
settings, selected_features = op.get_table_export_settings()
dialog = ExportObjectInfoDialog(dimensions,
feature_names,
selected_features=selected_features,
title=self.get_export_dialog_title(),
filename=self._default_export_filename)
if not dialog.exec_():
return (None, None)
settings = dialog.settings()
selected_features = list(dialog.checked_features()) # returns a generator, but that's inconvenient because it can't be serialized.
return settings, selected_features
def show_export_dialog(self):
"""
Shows the ExportObjectInfoDialog and calls the operators export_object_data method
"""
# Late imports here, so we don't accidentally import PyQt during headless mode.
from ilastik.widgets.exportObjectInfoDialog import ExportObjectInfoDialog
from ilastik.widgets.progressDialog import ProgressDialog
dimensions = self.get_raw_shape()
feature_names = self.get_feature_names()
dialog = ExportObjectInfoDialog(dimensions, feature_names, title=self.get_export_dialog_title())
if not dialog.exec_():
return
settings = dialog.settings()
selected_features = dialog.checked_features()
from ilastik.widgets.progressDialog import ProgressDialog
progress = ProgressDialog(["Feature Data", "Labeling Rois", "Raw Image", "Exporting"])
progress.set_busy(True)
progress.show()
gui = {
"dialog": progress,
"ok": partial(progress.safe_popup, "information", "Information", "Export successful!"),
"cancel": partial(progress.safe_popup, "information", "Information", "Export cancelled!"),
"fail": partial(progress.safe_popup, "critical", "Critical", "Export failed!"),
"unlock": self.unlock_gui,
"lock": self.lock_gui
}
self.get_exporting_operator().export_object_data(settings, selected_features, gui)
def configure_export_dialog(self, gui, initial_settings):
dimensions = gui.get_raw_shape()
feature_names = gui.get_feature_names()
op = gui.get_exporting_operator()
settings, selected_features = op.get_table_export_settings()
dialog = ExportObjectInfoDialog(
dimensions,
feature_names,
selected_features=selected_features,
title=gui.get_export_dialog_title(),
initial_settings=settings,
)
dialog.show()
QApplication.processEvents()
# do the interaction with the dialog
file_type = initial_settings["file type"]
index = FILE_TYPES.index(file_type)
dialog.ui.fileFormat.setCurrentIndex(index)
file_path = initial_settings["file path"]
dialog.ui.exportPath.setText(file_path)
if file_type == "h5":
# TODO: what about normalize?
margin = initial_settings["margin"]
dialog.ui.addMargin.setValue(margin)
include_raw = initial_settings["include raw"]
dialog.ui.includeRaw.setChecked(include_raw)
compression_settings = initial_settings["compression"]
compression_type = compression_settings["compression"]
index = dialog.ui.compressionType.findText(compression_type)
dialog.ui.compressionType.setCurrentIndex(index)
shuffle = compression_settings["shuffle"]
dialog.ui.enableShuffling.setChecked(shuffle)
compression_rate = compression_settings["compression_opts"]
dialog.ui.gzipRate.setValue(compression_rate)
dialog.ui.selectAllFeatures.click()
QApplication.processEvents()
dialog.close()
QApplication.processEvents()
settings = dialog.settings()
selected_features = list(dialog.checked_features())
return settings, selected_features
def configure_export_dialog(self, gui, initial_settings):
dimensions = gui.get_raw_shape()
feature_names = gui.get_feature_names()
op = gui.get_exporting_operator()
settings, selected_features = op.get_table_export_settings()
dialog = ExportObjectInfoDialog(
dimensions,
feature_names,
selected_features=selected_features,
title=gui.get_export_dialog_title(),
initial_settings=settings)
dialog.show()
QApplication.processEvents()
# do the interaction with the dialog
file_type = initial_settings['file type']
index = FILE_TYPES.index(file_type)
dialog.ui.fileFormat.setCurrentIndex(index)
file_path = initial_settings['file path']
dialog.ui.exportPath.setText(file_path)
if file_type == 'h5':
# TODO: what about normalize?
margin = initial_settings['margin']
dialog.ui.addMargin.setValue(margin)
include_raw = initial_settings['include raw']
dialog.ui.includeRaw.setChecked(include_raw)
compression_settings = initial_settings['compression']
compression_type = compression_settings['compression']
index = dialog.ui.compressionType.findText(compression_type)
dialog.ui.compressionType.setCurrentIndex(index)
shuffle = compression_settings['shuffle']
dialog.ui.enableShuffling.setChecked(shuffle)
compression_rate = compression_settings['compression_opts']
dialog.ui.gzipRate.setValue(compression_rate)
dialog.ui.selectAllFeatures.click()
QApplication.processEvents()
dialog.close()
QApplication.processEvents()
settings = dialog.settings()
selected_features = list(dialog.checked_features())
return settings, selected_features
