def test_pipeline_transform():
# Test whether pipeline works with a transformer at the end.
# Also test pipeline.transform and pipeline.inverse_transform
iris = load_iris()
X = iris.data
pca = PCA(n_components=2, svd_solver="full")
pipeline = Pipeline([("pca", pca)])
# test transform and fit_transform:
X_trans = pipeline.fit(X).transform(X)
X_trans2 = pipeline.fit_transform(X)
X_trans3 = pca.fit_transform(X)
assert_array_almost_equal(X_trans, X_trans2)
assert_array_almost_equal(X_trans, X_trans3)
X_back = pipeline.inverse_transform(X_trans)
X_back2 = pca.inverse_transform(X_trans)
assert_array_almost_equal(X_back, X_back2)
def test_pipeline_transform():
# Test whether pipeline works with a transformer at the end.
# Also test pipeline.transform and pipeline.inverse_transform
iris = load_iris()
X = iris.data
pca = PCA(n_components=2)
pipeline = Pipeline([('pca', pca)])
# test transform and fit_transform:
X_trans = pipeline.fit(X).transform(X)
X_trans2 = pipeline.fit_transform(X)
X_trans3 = pca.fit_transform(X)
assert_allclose(X_trans, X_trans2, rtol=R_TOL)
assert_allclose(X_trans, X_trans3, rtol=R_TOL)
X_back = pipeline.inverse_transform(X_trans)
X_back2 = pca.inverse_transform(X_trans)
assert_allclose(X_back, X_back2, rtol=R_TOL)
def test_pipeline_transform():
# Test whether pipeline works with a transformer at the end.
# Also test pipeline.transform and pipeline.inverse_transform
iris = load_iris()
X = iris.data
pca = PCA(n_components=2)
pipeline = Pipeline([('pca', pca)])
# test transform and fit_transform:
X_trans = pipeline.fit(X).transform(X)
X_trans2 = pipeline.fit_transform(X)
X_trans3 = pca.fit_transform(X)
assert_array_almost_equal(X_trans, X_trans2)
assert_array_almost_equal(X_trans, X_trans3)
X_back = pipeline.inverse_transform(X_trans)
X_back2 = pca.inverse_transform(X_trans)
assert_array_almost_equal(X_back, X_back2)
def test_set_pipeline_step_passthrough(passthrough):
# Test setting Pipeline steps to None
X = np.array([[1]])
y = np.array([1])
mult2 = Mult(mult=2)
mult3 = Mult(mult=3)
mult5 = Mult(mult=5)
def make():
return Pipeline([("m2", mult2), ("m3", mult3), ("last", mult5)])
pipeline = make()
exp = 2 * 3 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
pipeline.set_params(m3=passthrough)
exp = 2 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
expected_params = {
"steps": pipeline.steps,
"m2": mult2,
"m3": passthrough,
"last": mult5,
"memory": None,
"m2__mult": 2,
"last__mult": 5,
"verbose": False,
}
assert pipeline.get_params(deep=True) == expected_params
pipeline.set_params(m2=passthrough)
exp = 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
# for other methods, ensure no AttributeErrors on None:
other_methods = [
"predict_proba",
"predict_log_proba",
"decision_function",
"transform",
"score",
]
for method in other_methods:
getattr(pipeline, method)(X)
pipeline.set_params(m2=mult2)
exp = 2 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
pipeline = make()
pipeline.set_params(last=passthrough)
# mult2 and mult3 are active
exp = 6
pipeline.fit(X, y)
pipeline.transform(X)
assert_array_equal([[exp]], pipeline.fit(X, y).transform(X))
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
with raises(AttributeError, match="has no attribute 'predict'"):
getattr(pipeline, "predict")
# Check 'passthrough' step at construction time
exp = 2 * 5
pipeline = Pipeline([("m2", mult2), ("m3", passthrough), ("last", mult5)])
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
def test_set_pipeline_step_passthrough(passthrough):
# Test setting Pipeline steps to None
X = np.array([[1]])
y = np.array([1])
mult2 = Mult(mult=2)
mult3 = Mult(mult=3)
mult5 = Mult(mult=5)
def make():
return Pipeline([('m2', mult2), ('m3', mult3), ('last', mult5)])
pipeline = make()
exp = 2 * 3 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
pipeline.set_params(m3=passthrough)
exp = 2 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
expected_params = {
'steps': pipeline.steps,
'm2': mult2,
'm3': passthrough,
'last': mult5,
'memory': None,
'm2__mult': 2,
'last__mult': 5,
'verbose': False
}
assert pipeline.get_params(deep=True) == expected_params
pipeline.set_params(m2=passthrough)
exp = 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
# for other methods, ensure no AttributeErrors on None:
other_methods = [
'predict_proba', 'predict_log_proba', 'decision_function', 'transform',
'score'
]
for method in other_methods:
getattr(pipeline, method)(X)
pipeline.set_params(m2=mult2)
exp = 2 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
pipeline = make()
pipeline.set_params(last=passthrough)
# mult2 and mult3 are active
exp = 6
pipeline.fit(X, y)
pipeline.transform(X)
assert_array_equal([[exp]], pipeline.fit(X, y).transform(X))
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
with raises(AttributeError, match="has no attribute 'predict'"):
getattr(pipeline, 'predict')
# Check 'passthrough' step at construction time
exp = 2 * 5
pipeline = Pipeline([('m2', mult2), ('m3', passthrough), ('last', mult5)])
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
def test_set_pipeline_step_none():
# Test setting Pipeline steps to None
X = np.array([[1]])
y = np.array([1])
mult2 = Mult(mult=2)
mult3 = Mult(mult=3)
mult5 = Mult(mult=5)
def make():
return Pipeline([('m2', mult2), ('m3', mult3), ('last', mult5)])
pipeline = make()
exp = 2 * 3 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
pipeline.set_params(m3=None)
exp = 2 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
expected_params = {'steps': pipeline.steps,
'm2': mult2,
'm3': None,
'last': mult5,
'memory': None,
'm2__mult': 2,
'last__mult': 5}
assert pipeline.get_params(deep=True) == expected_params
pipeline.set_params(m2=None)
exp = 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
# for other methods, ensure no AttributeErrors on None:
other_methods = ['predict_proba', 'predict_log_proba',
'decision_function', 'transform', 'score']
for method in other_methods:
getattr(pipeline, method)(X)
pipeline.set_params(m2=mult2)
exp = 2 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
pipeline = make()
pipeline.set_params(last=None)
# mult2 and mult3 are active
exp = 6
pipeline.fit(X, y)
pipeline.transform(X)
assert_array_equal([[exp]], pipeline.fit(X, y).transform(X))
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
with raises(AttributeError, match="has no attribute 'predict'"):
getattr(pipeline, 'predict')
# Check None step at construction time
exp = 2 * 5
pipeline = Pipeline([('m2', mult2), ('m3', None), ('last', mult5)])
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
def test_set_pipeline_step_none():
# Test setting Pipeline steps to None
X = np.array([[1]])
y = np.array([1])
mult2 = Mult(mult=2)
mult3 = Mult(mult=3)
mult5 = Mult(mult=5)
def make():
return Pipeline([('m2', mult2), ('m3', mult3), ('last', mult5)])
pipeline = make()
exp = 2 * 3 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
pipeline.set_params(m3=None)
exp = 2 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
assert_dict_equal(
pipeline.get_params(deep=True), {
'steps': pipeline.steps,
'm2': mult2,
'm3': None,
'last': mult5,
'memory': None,
'm2__mult': 2,
'last__mult': 5,
})
pipeline.set_params(m2=None)
exp = 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
# for other methods, ensure no AttributeErrors on None:
other_methods = [
'predict_proba', 'predict_log_proba', 'decision_function', 'transform',
'score'
]
for method in other_methods:
getattr(pipeline, method)(X)
pipeline.set_params(m2=mult2)
exp = 2 * 5
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
pipeline = make()
pipeline.set_params(last=None)
# mult2 and mult3 are active
exp = 6
pipeline.fit(X, y)
pipeline.transform(X)
assert_array_equal([[exp]], pipeline.fit(X, y).transform(X))
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
assert_raise_message(AttributeError,
"'NoneType' object has no attribute 'predict'",
getattr, pipeline, 'predict')
# Check None step at construction time
exp = 2 * 5
pipeline = Pipeline([('m2', mult2), ('m3', None), ('last', mult5)])
assert_array_equal([[exp]], pipeline.fit_transform(X, y))
assert_array_equal([exp], pipeline.fit(X).predict(X))
assert_array_equal(X, pipeline.inverse_transform([[exp]]))
