def test_logistic_ic50_scorer_binding_value_score():
cutoff = logistic_ic50_epitope_scorer.cutoff
# just being stronger than the cutoff should still make for a very low
# score
assert simple_ic50_epitope_scorer.binding_value_score(cutoff-1) < 0.001
# whereas very high affinity scores like 1nM should be scored highly
assert simple_ic50_epitope_scorer.binding_value_score(1.0) > 0.9
def test_logistic_ic50_scorer_binding_value_score():
cutoff = logistic_ic50_epitope_scorer.cutoff
# just being stronger than the cutoff should still make for a very low
# score
assert simple_ic50_epitope_scorer.binding_value_score(cutoff - 1) < 0.001
# whereas very high affinity scores like 1nM should be scored highly
assert simple_ic50_epitope_scorer.binding_value_score(1.0) > 0.9
def test_simple_ic50_epitope_scorer_binding_value_score():
# since default scorer doesn't use allele weights, expect accessing
# the allele weight to raise an exception
cutoff = simple_ic50_epitope_scorer.cutoff
assert simple_ic50_epitope_scorer.binding_value_score(cutoff-1) == 1
assert simple_ic50_epitope_scorer.binding_value_score(cutoff+1) == 0
def test_simple_ic50_epitope_scorer_binding_value_score():
# since default scorer doesn't use allele weights, expect accessing
# the allele weight to raise an exception
cutoff = simple_ic50_epitope_scorer.cutoff
assert simple_ic50_epitope_scorer.binding_value_score(cutoff - 1) == 1
assert simple_ic50_epitope_scorer.binding_value_score(cutoff + 1) == 0
