def load_models_from_sdml(self, sdml):
""" Load data models from an SDML literal. """
models = []
for model in SDML(sdml).get_output():
attach_filter_fields(model)
models.append(model)
self.load_models(models)
return models
def cause_exception(doc):
parser = SDML(doc)
output = [obj for obj in parser.get_output()]
def setUp(self):
super(SDMLUnitTests, self).setUp()
self.instance = SDML(TEST_SDML_DOCS[0])
class SDMLUnitTests(InternalTests):
def setUp(self):
super(SDMLUnitTests, self).setUp()
self.instance = SDML(TEST_SDML_DOCS[0])
def tearDown(self):
self.remove_model_from_cache('TestMedication2')
self.remove_model_from_cache('TestPrescription2')
self.remove_model_from_cache('TestFill2')
self.instance = None
super(SDMLUnitTests, self).tearDown()
def test_get_output(self):
output_classes = [obj for obj in self.instance.get_output()]
self.assertEqual(len(output_classes), 3) # Three models in the definition
med_klass = scrip_klass = fill_klass = None
for klass in output_classes:
klass_name = klass.__name__
if klass_name == 'TestMedication2':
med_klass = klass
elif klass_name == 'TestPrescription2':
scrip_klass = klass
elif klass_name == 'TestFill2':
fill_klass = klass
else:
self.fail('SDML parsing produced an invalid class %s'%klass_name)
if not med_klass:
self.fail('SDML parsing did not produce a TestMedication2 class')
if not scrip_klass:
self.fail('SDML parsing did not produce a TestPrescription2 class')
if not fill_klass:
self.fail('SDML parsing did not produce a TestFill2 class')
# Make sure the testmedication2 class parsed as expected
med_expected_fields = {
'name': models.CharField,
'date_started': models.DateTimeField,
'date_stopped': models.DateTimeField,
'brand_name': models.CharField,
'route': models.CharField,
}
self.check_class_fields(med_klass, med_expected_fields)
# The 'prescription' field should be a OneToOne field, pointing at TestPrescription2
prescription_field = med_klass._meta.get_field('prescription')
self.assertTrue(isinstance(prescription_field, models.OneToOneField))
self.assertEqual(prescription_field.rel.to, scrip_klass)
# The 'fills' field should be the reverse side of a ForeignKey from TestFill2 to TestMedication2
fills_field = med_klass.fills
self.assertTrue(isinstance(fills_field, models.fields.related.ForeignRelatedObjectsDescriptor))
self.assertEqual(fills_field.related.model, fill_klass)
# Make sure the testprescription2 class parsed as expected
scrip_expected_fields = {
'prescribed_by_name': models.CharField,
'prescribed_by_institution': models.CharField,
'prescribed_on': models.DateTimeField,
'prescribed_stop_on': models.DateTimeField,
}
self.check_class_fields(scrip_klass, scrip_expected_fields)
# The TestPrescription2 model should have a 'testmedication2' field pointing to the Medication class
# (the reverse link of the OneToOne from the TestMedication2)
scrip_parent_link = scrip_klass.testmedication2
self.assertTrue(isinstance(scrip_parent_link, models.fields.related.SingleRelatedObjectDescriptor))
self.assertEqual(scrip_parent_link.related.model, med_klass)
# Make sure the testfill2 class parsed as expected
fill_expected_fields = {
'date_filled': models.DateField,
'supply_days': models.FloatField,
'filled_at_name': models.CharField,
'code_identifier': models.CharField, # CodedValues should be expanded
'code_title': models.CharField,
'code_system': models.CharField,
'quantity_value': models.CharField, # ValueAndUnit fields should be expanded
'quantity_unit': models.CharField,
'pharmacy_ncpdpid': models.CharField, # Pharmacy fields should be expanded
'pharmacy_org': models.CharField,
'pharmacy_adr_country': models.CharField, # Address fields should be expanded (recursively, from Pharmacy)
'pharmacy_adr_city': models.CharField,
'pharmacy_adr_postalcode': models.CharField,
'pharmacy_adr_region': models.CharField,
'pharmacy_adr_street': models.CharField,
'prescriber_dea_number': models.CharField, # Provider fields should be expanded
'prescriber_ethnicity': models.CharField,
'prescriber_npi_number': models.CharField,
'prescriber_preferred_language': models.CharField,
'prescriber_race': models.CharField,
'prescriber_adr_country': models.CharField, # Address fields should be expanded (recursively, from Prescriber)
'prescriber_adr_city': models.CharField,
'prescriber_adr_postalcode': models.CharField,
'prescriber_adr_region': models.CharField,
'prescriber_adr_street': models.CharField,
'prescriber_bday': models.DateField,
'prescriber_email': models.EmailField,
'prescriber_name_family': models.CharField, # Name fields should be expanded (recursively, from Prescriber)
'prescriber_name_given': models.CharField,
'prescriber_name_prefix': models.CharField,
'prescriber_name_suffix': models.CharField,
'prescriber_gender': models.CharField,
'prescriber_tel_1_type': models.CharField, # Telephone fields should be expanded (recursively, from Prescriber)
'prescriber_tel_1_number': models.CharField,
'prescriber_tel_1_preferred_p': models.BooleanField,
'prescriber_tel_2_type': models.CharField,
'prescriber_tel_2_number': models.CharField,
'prescriber_tel_2_preferred_p': models.BooleanField,
}
self.check_class_fields(fill_klass, fill_expected_fields)
# The TestFill2 model should have a ForeignKey field named 'testmedication2' pointing to the Medication class
fill_parent_link = fill_klass._meta.get_field('testmedication2')
self.assertTrue(isinstance(fill_parent_link, models.ForeignKey))
self.assertEqual(fill_parent_link.rel.to, med_klass)
def test_invalid_schemas(self):
def cause_exception(doc):
parser = SDML(doc)
output = [obj for obj in parser.get_output()]
for doc in INVALID_TEST_SDML_DOCS:
self.assertRaises(SDMException, cause_exception, doc)
def check_class_fields(self, klass, expected_fields):
for field_name, field_class in expected_fields.iteritems():
try:
field = klass._meta.get_field(field_name)
except FieldDoesNotExist:
self.fail('SDML parsing did not produce field %s on class %s'%(field_name, klass.__name__))
self.assertTrue(isinstance(field, field_class))
def cause_exception(doc):
parser = SDML(doc)
output = [obj for obj in parser.get_output()]
def setUp(self):
super(SDMLUnitTests, self).setUp()
self.instance = SDML(TEST_SDML_DOCS[0])
class SDMLUnitTests(InternalTests):
def setUp(self):
super(SDMLUnitTests, self).setUp()
self.instance = SDML(TEST_SDML_DOCS[0])
def tearDown(self):
self.remove_model_from_cache('TestMedication2')
self.remove_model_from_cache('TestPrescription2')
self.remove_model_from_cache('TestFill2')
self.instance = None
super(SDMLUnitTests, self).tearDown()
def test_get_output(self):
output_classes = [obj for obj in self.instance.get_output()]
self.assertEqual(len(output_classes),
3) # Three models in the definition
med_klass = scrip_klass = fill_klass = None
for klass in output_classes:
klass_name = klass.__name__
if klass_name == 'TestMedication2':
med_klass = klass
elif klass_name == 'TestPrescription2':
scrip_klass = klass
elif klass_name == 'TestFill2':
fill_klass = klass
else:
self.fail('SDML parsing produced an invalid class %s' %
klass_name)
if not med_klass:
self.fail('SDML parsing did not produce a TestMedication2 class')
if not scrip_klass:
self.fail('SDML parsing did not produce a TestPrescription2 class')
if not fill_klass:
self.fail('SDML parsing did not produce a TestFill2 class')
# Make sure the testmedication2 class parsed as expected
med_expected_fields = {
'name': models.CharField,
'date_started': models.DateTimeField,
'date_stopped': models.DateTimeField,
'brand_name': models.CharField,
'route': models.CharField,
}
self.check_class_fields(med_klass, med_expected_fields)
# The 'prescription' field should be a OneToOne field, pointing at TestPrescription2
prescription_field = med_klass._meta.get_field('prescription')
self.assertTrue(isinstance(prescription_field, models.OneToOneField))
self.assertEqual(prescription_field.rel.to, scrip_klass)
# The 'fills' field should be the reverse side of a ForeignKey from TestFill2 to TestMedication2
fills_field = med_klass.fills
self.assertTrue(
isinstance(fills_field,
models.fields.related.ForeignRelatedObjectsDescriptor))
self.assertEqual(fills_field.related.model, fill_klass)
# Make sure the testprescription2 class parsed as expected
scrip_expected_fields = {
'prescribed_by_name': models.CharField,
'prescribed_by_institution': models.CharField,
'prescribed_on': models.DateTimeField,
'prescribed_stop_on': models.DateTimeField,
}
self.check_class_fields(scrip_klass, scrip_expected_fields)
# The TestPrescription2 model should have a 'testmedication2' field pointing to the Medication class
# (the reverse link of the OneToOne from the TestMedication2)
scrip_parent_link = scrip_klass.testmedication2
self.assertTrue(
isinstance(scrip_parent_link,
models.fields.related.SingleRelatedObjectDescriptor))
self.assertEqual(scrip_parent_link.related.model, med_klass)
# Make sure the testfill2 class parsed as expected
fill_expected_fields = {
'date_filled': models.DateField,
'supply_days': models.FloatField,
'filled_at_name': models.CharField,
'code_identifier':
models.CharField, # CodedValues should be expanded
'code_title': models.CharField,
'code_system': models.CharField,
'quantity_value':
models.CharField, # ValueAndUnit fields should be expanded
'quantity_unit': models.CharField,
'pharmacy_ncpdpid':
models.CharField, # Pharmacy fields should be expanded
'pharmacy_org': models.CharField,
'pharmacy_adr_country': models.
CharField, # Address fields should be expanded (recursively, from Pharmacy)
'pharmacy_adr_city': models.CharField,
'pharmacy_adr_postalcode': models.CharField,
'pharmacy_adr_region': models.CharField,
'pharmacy_adr_street': models.CharField,
'prescriber_dea_number':
models.CharField, # Provider fields should be expanded
'prescriber_ethnicity': models.CharField,
'prescriber_npi_number': models.CharField,
'prescriber_preferred_language': models.CharField,
'prescriber_race': models.CharField,
'prescriber_adr_country': models.
CharField, # Address fields should be expanded (recursively, from Prescriber)
'prescriber_adr_city': models.CharField,
'prescriber_adr_postalcode': models.CharField,
'prescriber_adr_region': models.CharField,
'prescriber_adr_street': models.CharField,
'prescriber_bday': models.DateField,
'prescriber_email': models.EmailField,
'prescriber_name_family': models.
CharField, # Name fields should be expanded (recursively, from Prescriber)
'prescriber_name_given': models.CharField,
'prescriber_name_prefix': models.CharField,
'prescriber_name_suffix': models.CharField,
'prescriber_gender': models.CharField,
'prescriber_tel_1_type': models.
CharField, # Telephone fields should be expanded (recursively, from Prescriber)
'prescriber_tel_1_number': models.CharField,
'prescriber_tel_1_preferred_p': models.BooleanField,
'prescriber_tel_2_type': models.CharField,
'prescriber_tel_2_number': models.CharField,
'prescriber_tel_2_preferred_p': models.BooleanField,
}
self.check_class_fields(fill_klass, fill_expected_fields)
# The TestFill2 model should have a ForeignKey field named 'testmedication2' pointing to the Medication class
fill_parent_link = fill_klass._meta.get_field('testmedication2')
self.assertTrue(isinstance(fill_parent_link, models.ForeignKey))
self.assertEqual(fill_parent_link.rel.to, med_klass)
def test_invalid_schemas(self):
def cause_exception(doc):
parser = SDML(doc)
output = [obj for obj in parser.get_output()]
for doc in INVALID_TEST_SDML_DOCS:
self.assertRaises(SDMException, cause_exception, doc)
def check_class_fields(self, klass, expected_fields):
for field_name, field_class in expected_fields.iteritems():
try:
field = klass._meta.get_field(field_name)
except FieldDoesNotExist:
self.fail('SDML parsing did not produce field %s on class %s' %
(field_name, klass.__name__))
self.assertTrue(isinstance(field, field_class))
