def test_grounded_endpoint_with_pmids_on_medline(): pmid_list = ['16403219', '22258404', '16961925', '22096607'] for pmid in pmid_list: rp = rlimsp.process_from_webservice(pmid, id_type='pmid', source='medline', with_grounding=False)
def test_grounded_endpoint_with_pmids(): pmid_list = ['16403219', '22258404', '16961925', '22096607'] stmts = [] for pmid in pmid_list: rp = rlimsp.process_from_webservice(pmid, id_type='pmid') assert len(rp.statements), len(rp.statements) stmts.extend(rp.statements) assert len(stmts) > 10, len(stmts)
def test_grounded_endpoint_with_pmids(): pmid_list = ['16403219', '22258404', '16961925', '22096607'] stmts = [] for pmid in pmid_list: rp = rlimsp.process_from_webservice(pmid, id_type='pmid') assert len(rp.statements), len(rp.statements) stmts.extend(rp.statements) assert len(stmts) > 10, len(stmts)
def test_simple_usage(): rp = rlimsp.process_from_webservice('PMC3717945') stmts = rp.statements assert len(stmts) == 6, len(stmts) for s in stmts: assert len(s.evidence) == 1, "Wrong amount of evidence." ev = s.evidence[0] assert ev.annotations, "Missing annotations." assert 'agents' in ev.annotations.keys() assert 'trigger' in ev.annotations.keys()
def test_simple_usage(): rp = rlimsp.process_from_webservice('PMC3717945') stmts = rp.statements assert len(stmts) == 33, len(stmts) for s in stmts: assert len(s.evidence) == 1, "Wrong amount of evidence." ev = s.evidence[0] assert ev.annotations, "Missing annotations." assert 'agents' in ev.annotations.keys() assert 'trigger' in ev.annotations.keys()
def test_grounded_endpoint_with_pmids_on_medline(): pmid_list = ['16403219', '22258404', '16961925', '22096607'] for pmid in pmid_list: rp = rlimsp.process_from_webservice(pmid, id_type='pmid', source='medline', with_grounding=False)
def test_ungrounded_usage(): rp = rlimsp.process_from_webservice('PMC3717945', with_grounding=False) assert len(rp.statements) == 33, len(rp.statements)
def test_ungrounded_usage(): rp = rlimsp.process_from_webservice('PMC3717945', with_grounding=False) assert len(rp.statements) == 33, len(rp.statements)