def test_create_sparse(self): data = sparse.csr_matrix(self.expr.values) adata = InferelatorData(data, gene_names=self.expr.columns.astype(str), sample_names=self.expr.index.astype(str)) InferelatorData._make_idx_str(self.expr) pdt.assert_frame_equal(self.expr, adata._adata.to_df())
def test_create_array(self): adata = InferelatorData(self.expr.values, gene_names=self.expr.columns.astype(str), sample_names=self.expr.index.astype(str)) InferelatorData._make_idx_str(self.expr) pdt.assert_frame_equal(self.expr, adata._adata.to_df())