def make_fam2():
# 1 affected kid, parent, grandparent
fam = Family.from_ped("""\
#family_id sample_id paternal_id maternal_id sex phenotype
1 dad 0 0 1 1
1 mom grandpa grandma 2 2
1 kid dad mom 1 2
1 kid2 dad mom 1 1
1 grandma 0 0 2 2
1 grandpa 0 0 1 1""")
return fam
def make_fam2():
# 1 affected kid, parent, grandparent
fam = Family.from_ped("""\
#family_id sample_id paternal_id maternal_id sex phenotype
1 dad 0 0 1 1
1 mom grandpa grandma 2 2
1 kid dad mom 1 2
1 kid2 dad mom 1 1
1 grandma 0 0 2 2
1 grandpa 0 0 1 1""")
return fam
def make_fam1():
# only 1 affected kid.
fam = Family.from_ped("""\
#family_id sample_id paternal_id maternal_id sex phenotype
1 dad 0 0 1 1
1 mom grandpa grandma 2 1
1 kid dad mom 1 2
1 kid2 dad mom 1 1
1 grandma 0 0 2 1
1 grandpa 0 0 1 1""")
return fam
def make_fam1():
# only 1 affected kid.
fam = Family.from_ped("""\
#family_id sample_id paternal_id maternal_id sex phenotype
1 dad 0 0 1 1
1 mom grandpa grandma 2 1
1 kid dad mom 1 2
1 kid2 dad mom 1 1
1 grandma 0 0 2 1
1 grandpa 0 0 1 1""")
return fam
