def __init__(self, name, experiment, description=''):
super(Fit_Sites, self).__init__(name, experiment, description)
self.Fit_Frequency_x = FloatProp('Fit_Frequency_x', experiment,
'the fit for the x frequency', '0')
self.Fit_Frequency_y = FloatProp('Fit_Frequency_y', experiment,
'the fit for the y frequency', '0')
self.properties += ['Fit_site', 'Fit_Frequency_x', 'Fit_Frequency_y']
def __init__(self, name, experiment):
super(HSDIO, self).__init__(name, experiment)
self.resourceName = StrProp('resourceName', experiment,
'the hardware location of the HSDIO card',
"'Dev1'")
self.clockRate = FloatProp('clockRate', experiment,
'samples/channel/sec', '1000')
self.units = FloatProp(
'units', experiment,
'multiplier for HSDIO timing values (milli=.001)', '1')
self.hardwareAlignmentQuantum = IntProp('hardwareAlignmentQuantum',
experiment,
'(PXI=1,SquareCell=2)', '1')
self.channels = NumpyChannels(experiment, self)
self.triggers = ListProp('triggers',
self.experiment,
listElementType=ScriptTrigger,
listElementName='trigger')
self.startTrigger = StartTrigger(experiment)
self.properties += [
'version', 'resourceName', 'clockRate', 'units',
'hardwareAlignmentQuantum', 'triggers', 'channels', 'startTrigger',
'numChannels'
]
# script and waveforms are handled specially in HSDIO.toHardware()
self.doNotSendToHardware += ['units', 'numChannels']
self.transition_list = [] # an empty list to store
self.repeat_list = []
def __init__(self, name, experiment, description=''):
super(Conex, self).__init__(name, experiment, description)
self.IDString = StrProp('IDString', experiment, 'Instrument Key','0')
self.SetPos = FloatProp('SetPos', experiment, 'Set position (mm)','0')
self.Vel = FloatProp('Vel', experiment, 'Velocity (mm/s)','0')
self.Threshold = FloatProp('PositionThreshold', experiment, 'Threshold for Position (mm)','0')
self.properties += ['SetPos', 'enableVel', 'Vel', "IDString", 'Threshold', 'enable']
def __init__(self, name, experiment, description=''):
super(RF_generator, self).__init__(name, experiment, description)
self.enable = False
self.GPIBchannel = 0
self.frequency = FloatProp('frequency', self.experiment, '[MHz]', '10')
self.power = FloatProp('power', self.experiment, '[dBm]', '0')
self.properties += ['enable', 'GPIBchannel', 'frequency', 'power']
def __init__(self, experiment):
super(DAQmxDO, self).__init__('DAQmxDO', experiment)
self.resourceName = StrProp('resourceName', experiment, 'the hardware location of the card', "'Dev1'")
self.clockRate = FloatProp('clockRate', experiment, 'samples/channel/sec', '1000')
self.units = FloatProp('units', experiment, 'multiplier for timing values (milli=.001)', '1')
self.channels = NumpyChannels(experiment, self)
self.startTrigger = StartTrigger(experiment)
self.properties += ['version', 'resourceName', 'clockRate', 'units', 'channels', 'startTrigger', 'numChannels']
# the number of channels is defined by the resourceName (and the waveform which must agree), so
# channels need not be send to hardware
self.doNotSendToHardware += ['units', 'channels', 'numChannels']
self.transition_list = []
def __init__(self, name, experiment, description=''):
super(BILTcard, self).__init__(name, experiment, description)
self.desired_voltage = FloatProp('desired_voltage', experiment,
'the desired voltage', '0')
self.properties += [
'chassis_card_number', 'channel_number', 'desired_voltage'
]
def __init__(self, name, experiment, description=''):
super(UnlockMonitor, self).__init__(name, experiment, description)
self.IP = StrProp('IP', experiment, 'IP Address of Raspberry Pi',
'10.141.196.160')
self.Port = IntProp('Port', experiment, 'Port', '50007')
self.Threshold = FloatProp('Threshold', experiment,
'Threshold for locked/unlocked', '30')
self.properties += ['version', 'IP', 'Port', 'Threshold']
def __init__(self, experiment):
super(AnalogOutput, self).__init__('AnalogOutput', experiment)
self.enable = False
self.physicalChannels = StrProp('physicalChannels', self.experiment,
'', '"PXI1Slot2/ao0:7"')
self.minimum = FloatProp('minimum', self.experiment, '', '-10')
self.maximum = FloatProp('maximum', self.experiment, '', '10')
self.clockRate = FloatProp('clockRate', self.experiment, '', '1000.0')
self.units = FloatProp('units', self.experiment,
'equations entered in ms', '.001')
self.waitForStartTrigger = BoolProp('waitForStartTrigger',
self.experiment, '', 'True')
self.triggerSource = StrProp('triggerSource', self.experiment, '',
'"/PXI1Slot2/PFI0"')
self.triggerEdge = StrProp('triggerEdge', self.experiment, '',
'"Rising"')
self.exportStartTrigger = BoolProp(
'exportStartTrigger', self.experiment,
'Should we trigger all other cards off the AO card?', 'True')
self.exportStartTriggerDestination = StrProp(
'exportStartTriggerDestination', self.experiment,
'What line to send the AO StartTrigger out to?',
'"/PXISlot2/PXI_Trig0"')
self.useExternalClock = BoolProp(
'useExternalClock', self.experiment,
'True for external clock, false for default clock.', 'False')
self.externalClockSource = StrProp(
'externalClockSource', self.experiment,
'Where does the external clock come in?', '"/PXISlot2/PFI9"')
self.maxExternalClockRate = FloatProp(
'maxExternalClockRate', self.experiment,
'Upper limit on the external clock. Does not have to be exact.',
'2000000')
self.properties += [
'version', 'physicalChannels', 'numChannels', 'minimum', 'maximum',
'clockRate', 'units', 'waitForStartTrigger', 'triggerSource',
'triggerEdge', 'exportStartTrigger',
'exportStartTriggerDestination', 'useExternalClock',
'externalClockSource', 'maxExternalClockRate',
'channel_descriptions'
]
self.doNotSendToHardware += [
'numChannels', 'units', 'channel_descriptions'
]
self.transition_list = [] # an empty list to store
def __init__(self, name, experiment, description=''):
super(PiezoChannel, self).__init__(name, experiment, description)
self.readServo = False
self.setServo = BoolProp('setServo', self.experiment, '', 'False')
self.setPosition = FloatProp('setPosition', self.experiment, '', '0')
self.readAxis = ''
self.readServo = False
self.readPosition = float('nan')
self.properties += [
'version', 'setServo', 'setPosition', 'readAxis', 'readServo',
'readPosition'
]
def __init__(self, experiment):
super(AnalogInput, self).__init__('AnalogInput', experiment)
self.sample_rate = FloatProp('sample_rate', experiment, 'samples per second', '1000.0')
self.source = StrProp('source', experiment, '', '"PXI1Slot6/ai0:15"')
self.samples_per_measurement = IntProp('samples_per_measurement', experiment, '', '1')
self.waitForStartTrigger = BoolProp('waitForStartTrigger', experiment, '', 'True')
self.triggerSource = StrProp('triggerSource', experiment, '', '"/PXI1Slot6/PFI0"')
self.triggerEdge = StrProp('triggerEdge', experiment, '"Rising" or "Falling"', '"Rising"')
self.channels = Numpy1DProp('channels', experiment, 'a list of channel descriptions', dtype=[('description', object)], hdf_dtype=[('description', h5py.special_dtype(vlen=str))], zero=('new'))
self.ground_mode = StrProp('ground_mode', experiment, 'RSE for ungrounded sensors, NRSE for grounded sensors', '"NRSE"')
self.properties += ['version', 'sample_rate', 'source', 'samples_per_measurement', 'waitForStartTrigger',
'triggerSource', 'triggerEdge', 'channels', 'ground_mode']
self.doNotSendToHardware += ['channels']
def __init__(self, name, experiment, description=''):
super(NIScopeInstrument, self).__init__(name, experiment, description)
self.DeviceName = StrProp('DeviceName', experiment, 'NI Device Name',
'Dev0')
self.TrigLevel = FloatProp('TrigLevel', experiment,
'Trigger Level (V)', '0')
self.TrigDelay = FloatProp('TrigDelay', experiment,
'Trigger Delay (s)', '0')
self.HorizRecordLength = IntProp(
'HorizRecordLength', experiment,
'Number of points to take per trigger', '0')
self.Chan0Offset = FloatProp('Chan0Offset', experiment,
'CH0 Offset (V)', '0')
self.Chan1Offset = FloatProp('Chan1Offset', experiment,
'CH1 Offset (V)', '0')
self.properties += [
'DeviceName', 'TrigLevel', 'TrigDelay', 'HorizRecordLength',
'Chan0Offset', 'Chan1Offset', 'Chan1Atten', 'Chan1Impedance',
'Chan1Coupling', 'Chan1VertScale', 'Chan0Atten', 'Chan0Impedance',
'Chan0Coupling', 'Chan0VertScale', 'HorizScale', 'TrigSource',
'TrigMode', 'TrigSlope', 'FFTMeas'
]
def __init__(self, name, experiment, description=''):
super(Noise_Eater, self).__init__(name, experiment, description)
self.target_setting1 = FloatProp('target_setting1', experiment,
'the target power 1 percentage',
'100')
self.target_setting2 = FloatProp('target_setting2', experiment,
'the target power 2 percentage',
'100')
self.target_setting3 = FloatProp('target_setting3', experiment,
'the target power 3 percentage',
'100')
self.target_setting4 = FloatProp('target_setting4', experiment,
'the target power 4 percentage',
'100')
self.properties += [
'target_setting1', 'target_setting2', 'target_setting3',
'target_setting4', 'IP', 'port'
]
self.setting_array = [
self.target_setting1, self.target_setting2, self.target_setting3,
self.target_setting4
]
def __init__(self, name, experiment, description=''):
super(DDSchannel, self).__init__(name, experiment, description)
self.power = BoolProp('power', self.experiment,
'enable RF output from this channel', 'False')
self.refClockRate = IntProp('refClockRate', self.experiment, '[MHz]',
'1000')
self.fullScaleOutputPower = FloatProp('fullScaleOutputPower',
self.experiment, '[dBm]', '0')
self.RAMenable = BoolProp('RAMenable', self.experiment, 'RAM enable',
'False')
self.RAMDestType = IntProp('RAMDestType', self.experiment,
'0:Frequency,1:Phase,2:Amplitude,3:Polar',
'0')
self.RAMDefaultFrequency = FloatProp('RAMDefaultFrequency',
self.experiment, '[MHz]', '0')
self.RAMDefaultAmplitude = FloatProp('RAMDefaultAmplitude',
self.experiment, '[dBm]', '0')
self.RAMDefaultPhase = FloatProp('RAMDefaultPhase', self.experiment,
'[rad]', '0')
'''each channel has exactly 8 profiles'''
self.profileDescriptionList = []
self.profiles = ListProp('profiles',
self.experiment,
listProperty=[
DDSprofile('profile',
self.experiment,
channel=self) for i in range(8)
],
listElementType=DDSprofile,
listElementName='profile',
listElementKwargs={'channel': self})
self.properties += [
'power', 'refClockRate', 'fullScaleOutputPower', 'RAMenable',
'RAMDestType', 'RAMDefaultFrequency', 'RAMDefaultAmplitude',
'RAMDefaultPhase', 'profiles', 'profileDescriptionList'
]
self.doNotSendToHardware += ['profileDescriptionList']
def __init__(self, name, experiment, description=''):
super(Embezzletron, self).__init__(name, experiment, description)
self.enable = self.experiment.Config.config.getboolean(
'DEV', 'EnableFakeData')
self.shotsPerMeasurement = IntProp('shotsPerMeasurement', experiment,
'number of expected shots', '2')
self.shotsPerMeasurement.value = 2
self.photoelectronScaling = FloatProp('photoelectronScaling',
experiment,
'photoelectron scaling', '1')
self.exposureTime = FloatRangeProp('exposureTime',
experiment,
'exposure time (seconds)',
low=0.000001,
high=7200)
self.exposureTime.value = 0.05
def __init__(self, name, experiment, description=''):
super(TCP_Instrument, self).__init__(name, experiment, description)
# defaults
self.port = 0
self.connected = False
self.error = False
self.connected = False
self.results = {}
self.sock = None
self.connected = False
self.timeout = FloatProp('timeout', experiment, 'how long before TCP gives up [s]', '1.0')
self.properties += ['IP', 'port', 'timeout']
self.doNotSendToHardware += ['IP', 'port', 'timeout']
def __init__(self, experiment):
super(LabView,
self).__init__('LabView', experiment,
'for communicating with a LabView system')
# defaults
self.port = 0
self.connected = False
self.error = False
self.cycleContinuously = False
self.connected = False
self.HSDIO = HSDIO.HSDIO('HSDIO', experiment)
self.piezo = piezo.Piezo(experiment)
self.RF_generators = RF_generators.RF_generators(experiment)
self.AnalogOutput = AnalogOutput.AnalogOutput(experiment)
self.AnalogInput = AnalogInput.AnalogInput(experiment)
self.Counters = Counter.Counters('Counters', experiment)
self.DAQmxDO = DAQmxDO.DAQmxDO(experiment)
self.camera = Camera.HamamatsuC9100_13(experiment)
self.TTL = TTL.TTL(experiment)
self.results = {}
self.instruments = [
self.HSDIO, self.piezo, self.RF_generators, self.AnalogOutput,
self.AnalogInput, self.Counters, self.DAQmxDO, self.camera,
self.TTL
]
self.sock = None
self.connected = False
self.timeout = FloatProp(
'timeout', experiment,
'how long before LabView gives up and returns [s]', '1.0')
self.properties += [
'IP', 'port', 'timeout', 'AnalogOutput', 'AnalogInput', 'HSDIO',
'piezo', 'RF_generators', 'DAQmxDO', 'camera', 'TTL', 'Counters',
'cycleContinuously'
]
self.doNotSendToHardware += ['IP', 'port', 'enable']
def __init__(self, name, experiment, description=''):
super(InstekPST, self).__init__(name, experiment, description)
self.com_port = StrProp('com_port', experiment, 'Communications port of PST','0')
self.tracking = IntProp('tracking', experiment, 'Tracking Mode (0 Independent; 1 Parallel; 2 Series)','0')
#self.num_chans = IntProp('num_chans', experiment, 'Number of channels','0')
self.voltage_setpoint_1 = FloatProp('voltage_setpoint_1', experiment, 'Voltage Setpoint for Channel 1','0')
self.current_setpoint_1 = FloatProp('current_setpoint_1', experiment, 'Current Setpoint for Channel 1','0')
self.voltage_setpoint_2 = FloatProp('voltage_setpoint_2', experiment, 'Voltage Setpoint for Channel 2','0')
self.current_setpoint_2 = FloatProp('current_setpoint_2', experiment, 'Current Setpoint for Channel 2','0')
self.voltage_setpoint_3 = FloatProp('voltage_setpoint_3', experiment, 'Voltage Setpoint for Channel 3','0')
self.current_setpoint_3 = FloatProp('current_setpoint_3', experiment, 'Current Setpoint for Channel 3','0')
self.properties += ['com_port', 'serial_number', 'tracking',
'voltage_setpoint_1', 'current_setpoint_1', 'voltage_setpoint_2', 'current_setpoint_2',
'voltage_setpoint_3', 'current_setpoint_3', 'actual_voltage_1', 'actual_current_1',
'actual_voltage_2', 'actual_current_2', 'actual_voltage_3', 'actual_current_3',
]
def __init__(self, name, experiment, description=''):
super(PICamCamera, self).__init__(name, experiment, description)
self.AdcEMGain = IntProp('AdcEMGain', experiment, 'EM gain', '0')
#self.AdcAnalogGain = IntProp('AdcAnalogGain', experiment, 'Analog gain', '0')
self.exposureTime = FloatProp('exposureTime', experiment,
'exposure time for edge trigger (ms)',
'0')
self.shotsPerMeasurement = IntProp('shotsPerMeasurement', experiment,
'number of expected shots', '0')
self.currentCamera = StrProp('currentCamera', experiment,
'Current Camera', '0')
self.minPlot = IntProp('minPlot', experiment,
'Minimum Plot Scale Value', '0')
self.maxPlot = IntProp('maxPlot', experiment,
'Maximum Plot Scale Value', '32768')
self.properties += [
'AdcEMGain', 'AdcAnalogGain', 'exposureTime', 'triggerMode',
'shotsPerMeasurement', 'minPlot', 'maxPlot', 'currentCamera',
'acquisitionMode', 'binMode', 'AdvancedEMGain', 'EMGainMode',
'numPixX', 'numPixY', 'useDemo', 'ReadoutControl', 'shutterMode',
'averageMeasurements', 'ROI', 'roilowv', 'roilowh', 'roihighv',
'roihighh'
]
def __init__(self, name, experiment, description=''):
super(NIDAQmxAI, self).__init__(name, experiment, description)
self.DeviceName = StrProp('DeviceName', experiment, 'Device Name',
'Dev1')
self.chanList = StrProp('chanList', experiment, 'Channel List',
'[\'ai0\']')
self.samples_per_measurement = IntProp('samples_per_measurement',
experiment,
'Samples per Measurement', '1')
self.sample_rate = FloatProp('sample_rate', experiment, 'Sample Rate',
'1000')
self.waitForStartTrigger = BoolProp('waitForStartTrigger', experiment,
'Wait For Start Trigger', 'True')
self.triggerSource = StrProp('triggerSource', experiment,
'Trigger Source', 'Dev1/PFI0')
self.triggerEdge = StrProp('triggerEdge', experiment,
'Trigger Edge (\"Rising\" or \"Falling\")',
'Rising')
self.properties += [
'enable', 'DeviceName', 'chanList', 'samples_per_measurement',
'sample_rate', 'waitForStartTrigger', 'triggerSource',
'triggerEdge', 'applyFormula', 'formula'
]
def __init__(self, name, experiment, description=''):
super(Vaunix, self).__init__(name, experiment, description)
self.frequency = FloatProp('Frequency', experiment, 'Frequency (MHz)',
'0')
self.power = FloatProp('Power', experiment, 'Power (dBm)', '0')
self.pulsewidth = FloatProp('PulseWidth', experiment,
'Pulse Width (us)', '0')
self.pulserep = FloatProp('PulseRep', experiment,
'Pulse Rep Time (us)', '0')
self.startfreq = FloatProp('StartFreq', experiment,
'Start Frequency (MHz)', '0')
self.endfreq = FloatProp('EndFreq', experiment, 'End Frequency (MHz)',
'0')
self.sweeptime = IntProp('SweepTime', experiment, 'Sweep Time (ms)',
'0')
self.properties += [
'ID', 'model', 'serial', 'frequency', 'power', 'pulsewidth',
'pulserep', 'pulseenable', 'startfreq', 'endfreq', 'sweeptime',
'sweepmode', 'sweeptype', 'sweepdir', 'sweepenable', 'internalref',
'useexternalmod', 'rfonoff', 'maxPower'
]
def __init__(self, name, experiment, description='', channel=None):
self.channel = channel
super(DDSprofile, self).__init__(name, experiment, description)
self.frequency = FloatProp('frequency', self.experiment, '[MHz]', '0')
self.amplitude = FloatProp('amplitude', self.experiment, '[dBm]', '0')
self.phase = FloatProp('phase', self.experiment, '[rad]', '0')
self.RAMMode = IntProp(
'RAMMode', self.experiment,
'0:Direct Switch, 1:Ramp Up, 2:Bidirectional Ramp, 3:Continuous Bidirectional Ramp, 4: Continuous Recirculate, 5: Direct Switch 2, 6: Direct Switch 3',
'1')
self.ZeroCrossing = BoolProp('ZeroCrossing', self.experiment, '',
'False')
self.NoDwellHigh = BoolProp('NoDwellHigh', self.experiment, '',
'False')
self.FunctionOrStatic = BoolProp('FunctionOrStatic', self.experiment,
'True=function, False=static',
'False')
self.RAMFunction = StrProp('RAMFunction', self.experiment, '', '""')
self.RAMInitialValue = FloatProp('RAMInitialValue', self.experiment,
'', '0')
self.RAMStepValue = FloatProp('RAMStepValue', self.experiment, '', '0')
self.RAMTimeStep = FloatProp('RAMTimeStep', self.experiment, '[us]',
'0')
self.RAMNumSteps = IntProp('RAMNumSteps', self.experiment, '', '0')
self.RAMStaticArray = ListProp('RAMStaticArray',
self.experiment,
listElementType=RAMStaticPoint,
listElementName='point')
self.properties += [
'frequency', 'amplitude', 'phase', 'RAMMode', 'ZeroCrossing',
'NoDwellHigh', 'FunctionOrStatic', 'RAMFunction',
'RAMInitialValue', 'RAMStepValue', 'RAMTimeStep', 'RAMNumSteps',
'RAMStaticArray'
]
self.doNotSendToHardware += [
'RAMFunction', 'RAMInitialValue', 'RAMStepValue', 'RAMNumSteps',
'RAMStaticArray'
]
def __init__(self, experiment):
super(HamamatsuC9100_13, self).__init__(experiment)
self.forceImagesToU16 = BoolProp(
'forceImagesToU16', experiment,
'convert images to U16 (necessary on Aquarius hardware)', 'False')
self.EMGain = IntRangeProp('EMGain',
experiment,
'EMCCD gain',
'0',
low=0,
high=255)
self.analogGain = IntRangeProp('analogGain',
experiment,
'analog gain',
'0',
low=0,
high=5)
self.exposureTime = FloatRangeProp(
'exposureTime',
experiment,
'exposure time (seconds)',
'00.050',
low=.000001,
high=7200
) #low is 10 us, high is 7200 s, this setting does not apply if trigger is set to "level"
self.scanSpeed = EnumProp('scanSpeed', experiment,
'CCD readout scan speed', '"High"',
['Slow', 'Middle', 'High'])
self.lowLightSensitivity = EnumProp('lowLightSensitivity', experiment,
'low light sensitivity', '"Off"',
['Off', '5x', '13x', '21x'])
self.externalTriggerMode = EnumProp(
'externalTriggerMode', experiment, 'external trigger mode',
'"Level"', ['Edge', 'Level', 'Synchronous Readout'])
self.triggerPolarity = EnumProp('triggerPolarity', experiment,
'trigger polarity', '"Positive"',
['Positive', 'Negative'])
self.externalTriggerSource = EnumProp(
'externalTriggerSource', experiment, 'external trigger source',
'"BNC on Power Supply"', [
'Multi-Timing I/O Pin', 'BNC on Power Supply',
'CameraLink Interace'
])
self.cooling = EnumProp('cooling', experiment, 'TEC cooling', '"Off"',
['Off', 'On'])
self.fan = EnumProp('fan', experiment, 'fan', '"Off"', ['Off', 'On'])
self.scanMode = EnumProp('scanMode', experiment, 'scan mode',
'"Normal"',
['Normal', 'Super pixel', 'Sub-array'])
self.photoelectronScaling = FloatProp('photoelectronScaling',
experiment,
'photoelectron scaling', '1')
self.subArrayLeft = EnumProp('subArrayLeft', experiment,
'sub-array.left', '0', range(0, 512, 16))
self.subArrayTop = EnumProp('subArrayTop', experiment, 'sub-array.top',
'0', range(0, 512, 16))
self.subArrayWidth = EnumProp('subArrayWidth', experiment,
'sub-array.width', '512',
range(16, 513, 16))
self.subArrayHeight = EnumProp('subArrayHeight', experiment,
'sub-array.height', '512',
range(16, 513, 16))
self.superPixelBinning = EnumProp('superPixelBinning', experiment,
'super pixel binning', '"1x1"',
['1x1', '2x2', '4x4'])
self.frameGrabberAcquisitionRegionLeft = IntRangeProp(
'frameGrabberAcquisitionRegionLeft',
experiment,
'frameGrabberAcquisitionRegion.Left',
'0',
low=0,
high=512)
self.frameGrabberAcquisitionRegionTop = IntRangeProp(
'frameGrabberAcquisitionRegionTop',
experiment,
'frameGrabberAcquisitionRegion.Top',
'0',
low=0,
high=512)
self.frameGrabberAcquisitionRegionRight = IntRangeProp(
'frameGrabberAcquisitionRegionRight',
experiment,
'frameGrabberAcquisitionRegion.Right',
'512',
low=0,
high=512)
self.frameGrabberAcquisitionRegionBottom = IntRangeProp(
'frameGrabberAcquisitionRegionBottom',
experiment,
'frameGrabberAcquisitionRegion.Bottom',
'512',
low=0,
high=512)
self.numImageBuffers = IntRangeProp('numImageBuffers',
experiment,
'number of image buffers',
'300',
low=0)
self.shotsPerMeasurement = IntRangeProp('shotsPerMeasurement',
experiment,
'shots per measurement',
'1',
low=0)
self.properties += [
'version', 'forceImagesToU16', 'EMGain', 'analogGain',
'exposureTime', 'scanSpeed', 'lowLightSensitivity',
'externalTriggerMode', 'triggerPolarity', 'externalTriggerSource',
'cooling', 'fan', 'scanMode', 'photoelectronScaling',
'subArrayLeft', 'subArrayTop', 'subArrayWidth', 'subArrayHeight',
'superPixelBinning', 'frameGrabberAcquisitionRegionLeft',
'frameGrabberAcquisitionRegionTop',
'frameGrabberAcquisitionRegionRight',
'frameGrabberAcquisitionRegionBottom', 'numImageBuffers',
'shotsPerMeasurement'
]
self.doNotSendToHardware += ['photoelectronScaling']
def __init__(self, name, experiment, description=''):
super(Noise_Eater, self).__init__(name, experiment, description)
self.target_setting = FloatProp('target_setting1', experiment,
'the target Voltage', '1')
self.properties += ['target_setting', 'ip', 'ID']
def __init__(self, name, experiment, description=''):
super(Rearrange, self).__init__(name, experiment, description='')
self.properties += [
'version', 'IP', 'port', 'enable', 'sub_array_left',
'sub_array_top', 'sub_array_width', 'sub_array_height'
]
self.frequency_increment = FloatProp('frequency_increment', experiment,
'the target power 1 percentage',
'100')
self.jump_time = FloatProp('jump_time', experiment,
'the target power 1 percentage', '100')
self.laser_ramp_on_time = FloatProp('laser_ramp_on_time', experiment,
'the target power 1 percentage',
'100')
self.fit_freq_sites = ListProp(
'fit_freq_sites',
experiment,
'A of sites fequency offsets which can take variable inputs',
listElementType=Fit_Sites,
listElementName='fit_site_freq')
self.force_freq_sites = ListProp(
'force_freq_sites',
experiment,
'A of sites fequency offsets which can take variable inputs',
listElementType=Force_Sites,
listElementName='force_site_freq')
self.site_pattern = ListProp(
'site_pattern',
experiment,
'A of sites fequency offsets which can take variable inputs',
listElementType=Pattern_Sites,
listElementName='site_occupation')
#self.site_pattern = List('site_pattern', experiment, 'occupation', listElementType=Site_Offset,listElementName='occupation signature')
self.properties += [
'jump_time', 'frequency_increment', 'laser_ramp_on_time', 'enable',
'version', 'fit_freq_sites', 'force_freq_sites', 'site_pattern'
]
# where we are going to dump data after analysis
self.iter_analysis_base_path = 'analysis'
# open settings file
settings = h5py.File('settings.hdf5', 'r')
# get rows and columns
self.rows = settings['settings/experiment/ROI_rows'].value
self.columns = settings['settings/experiment/ROI_columns'].value
# get gaussian roi parameters and append image rows and columns to front of list
bottom = eval(settings[
'settings/experiment/LabView/camera/frameGrabberAcquisitionRegionBottom/function']
.value)
top = eval(settings[
'settings/experiment/LabView/camera/frameGrabberAcquisitionRegionTop/function']
.value)
image_rows = bottom - top
right = eval(settings[
'settings/experiment/LabView/camera/frameGrabberAcquisitionRegionRight/function']
.value)
left = eval(settings[
'settings/experiment/LabView/camera/frameGrabberAcquisitionRegionLeft/function']
.value)
image_columns = right - left
self.gaussian_roi_params = settings[
'settings/experiment/gaussian_roi/fitParams'].value
self.gaussian_roi_params = [(image_rows, image_columns)] + list(
self.gaussian_roi_params)
# get cutoffs to send to rearranger
barecutoff = settings[
'settings/experiment/thresholdROIAnalysis/threshold_array'].value[
0]
self.s0_thresholds = numpy.zeros(self.rows * self.columns)
if len(barecutoff) != len(self.s0_thresholds):
logger.warning(
'ROI number change detected, thresholds for rearrangement are invalid.'
)
barecutoff = numpy.resize(barecutoff, len(self.s0_thresholds))
for i in range(self.rows * self.columns):
self.s0_thresholds[i] = barecutoff[i][0]
self.s0_thresholds[i] = self.s0_thresholds[i]
#close hdf5 file
settings.close()
def __init__(self, name, experiment, description=''):
super(NewportStage, self).__init__(name, experiment, description)
self.setposition = FloatProp('setposition', experiment, 'Set Position (mm)','0')
self.comport = StrProp('comport',experiment,'COM port','COM6')
self.properties += ['setposition','comport']
def __init__(self, name, experiment, description=''):
super(PyPicomotor, self).__init__(name, experiment, description)
self.desired_position = FloatProp('desired_position', experiment, 'the desired position','0')
self.properties += ['current_position']
