def run_prompt(self):
self.run(False)
self.debug.print_debug(self, u'Entering interactive mode')
prompt = Interactive(self.gv)
manipulate = NlmManipulate(self.gv)
tree = manipulate.load_dom_tree()
ref_items = tree.xpath('//back/ref-list/ref')
# note that we don't want to exit even if there are no references to link because the user may want to delete
# some
delete_all = False
for p in tree.xpath('//xref[@ref-type="bibr"]'):
text = manipulate.get_stripped_text(p)
if 'rid' in p.attrib and p.attrib['rid'] == 'TO_LINK':
prompt.print_(
u"Found an unhandled reference marker: {0}".format(text))
elif 'rid' in p.attrib:
remote = next((x for x in ref_items if 'id' in x.attrib and (
x.attrib['id'] == p.attrib['rid'])), None)
remote_text = manipulate.get_stripped_text(remote)
prompt.print_(
u"Found a handled reference marker: \"{0}\" which links to \"{1}\""
.format(text, remote_text))
opts = ('Skip', 'Delete', 'deleTe all', 'Enter search', 'Ibid',
'enter Link id', 'skip Rest', 'show Context')
sel = ''
if delete_all:
sel = 'd'
else:
sel = prompt.input_options(opts)
result = self.handle_input(manipulate,
opts,
p,
prompt,
ref_items,
sel,
tree=tree)
if result == 'abort':
manipulate.save_tree(tree)
return
elif result == 'delall':
delete_all = True
manipulate.save_tree(tree)
def run_prompt(self):
self.run(False)
self.debug.print_debug(self, u"Entering interactive mode")
prompt = Interactive(self.gv)
manipulate = NlmManipulate(self.gv)
tree = manipulate.load_dom_tree()
ref_items = tree.xpath("//back/ref-list/ref")
# note that we don't want to exit even if there are no references to link because the user may want to delete
# some
delete_all = False
for p in tree.xpath('//xref[@ref-type="bibr"]'):
text = manipulate.get_stripped_text(p)
if "rid" in p.attrib and p.attrib["rid"] == "TO_LINK":
prompt.print_(u"Found an unhandled reference marker: {0}".format(text))
elif "rid" in p.attrib:
remote = next((x for x in ref_items if "id" in x.attrib and (x.attrib["id"] == p.attrib["rid"])), None)
remote_text = manipulate.get_stripped_text(remote)
prompt.print_(u'Found a handled reference marker: "{0}" which links to "{1}"'.format(text, remote_text))
opts = (
"Skip",
"Delete",
"deleTe all",
"Enter search",
"Ibid",
"enter Link id",
"skip Rest",
"show Context",
)
sel = ""
if delete_all:
sel = "d"
else:
sel = prompt.input_options(opts)
result = self.handle_input(manipulate, opts, p, prompt, ref_items, sel, tree=tree)
if result == "abort":
manipulate.save_tree(tree)
return
elif result == "delall":
delete_all = True
manipulate.save_tree(tree)
def run_prompt(self, interactive):
if not interactive:
self.debug.fatal_error(
self,
'Cannot enter confirmation mode without interactive flag')
prompt = Interactive(self.gv)
opts = ('Confirm', 'Unconfirm', 'cOnfirm all', 'uNconfirm all',
'Abort')
manipulate = NlmManipulate(self.gv)
tree = manipulate.load_dom_tree()
ref_items = tree.xpath('//back/ref-list/ref')
# note that we don't want to exit even if there are no references to link because the user may want to delete
# some
delete_all = False
confirm_all = False
for p in tree.xpath('//ref'):
text = manipulate.get_stripped_text(p)
sel = ''
if delete_all:
sel = 'u'
elif confirm_all:
sel = 'c'
else:
prompt.print_(
u"Please confirm whether the following is a bibliographic reference: {0}"
.format(text))
sel = prompt.input_options(opts)
result = self.handle_input(manipulate, opts, p, prompt, sel, tree,
text)
if result == 'abort':
return
elif result == 'delall':
delete_all = True
elif result == 'confirmall':
confirm_all = True
manipulate.save_tree(tree)
def run_prompt(self):
self.run(False)
self.debug.print_debug(self, u'Entering interactive mode')
prompt = Interactive(self.gv)
manipulate = NlmManipulate(self.gv)
tree = manipulate.load_dom_tree()
ref_items = tree.xpath('//back/ref-list/ref')
# note that we don't want to exit even if there are no references to link because the user may want to delete
# some
delete_all = False
for p in tree.xpath('//xref[@ref-type="bibr"]'):
text = manipulate.get_stripped_text(p)
if 'rid' in p.attrib and p.attrib['rid'] == 'TO_LINK':
prompt.print_(u"Found an unhandled reference marker: {0}".format(text))
elif 'rid' in p.attrib:
remote = next((x for x in ref_items if 'id' in x.attrib and (x.attrib['id'] == p.attrib['rid'])), None)
remote_text = manipulate.get_stripped_text(remote)
prompt.print_(u"Found a handled reference marker: \"{0}\" which links to \"{1}\"".format(text,
remote_text))
opts = ('Skip', 'Delete', 'deleTe all', 'Enter search', 'Ibid', 'enter Link id',
'skip Rest', 'show Context')
sel = ''
if delete_all:
sel = 'd'
else:
sel = prompt.input_options(opts)
result = self.handle_input(manipulate, opts, p, prompt, ref_items, sel, tree=tree)
if result == 'abort':
manipulate.save_tree(tree)
return
elif result == 'delall':
delete_all = True
manipulate.save_tree(tree)
def run_prompt(self, interactive):
if not interactive:
self.debug.fatal_error(self, "Cannot enter confirmation mode without interactive flag")
prompt = Interactive(self.gv)
opts = ("Confirm", "Unconfirm", "cOnfirm all", "uNconfirm all", "Abort")
manipulate = NlmManipulate(self.gv)
tree = manipulate.load_dom_tree()
ref_items = tree.xpath("//back/ref-list/ref")
# note that we don't want to exit even if there are no references to link because the user may want to delete
# some
delete_all = False
confirm_all = False
for p in tree.xpath("//ref"):
text = manipulate.get_stripped_text(p)
sel = ""
if delete_all:
sel = "u"
elif confirm_all:
sel = "c"
else:
prompt.print_(u"Please confirm whether the following is a bibliographic reference: {0}".format(text))
sel = prompt.input_options(opts)
result = self.handle_input(manipulate, opts, p, prompt, sel, tree, text)
if result == "abort":
return
elif result == "delall":
delete_all = True
elif result == "confirmall":
confirm_all = True
manipulate.save_tree(tree)
def main():
args = docopt(__doc__, version='meTypeset 0.1')
bare_gv = GV(args)
if args['--debug']:
bare_gv.debug.enable_debug(True)
bare_gv.debug.enable_prompt(Interactive(bare_gv))
if args['zotero']:
from zotero import libzotero
zotero = libzotero.LibZotero(
unicode(bare_gv.settings.get_setting(u'zotero', bare_gv)), bare_gv)
term = args['<query>']
term = re.sub(r'[\-,\.\<\>\(\)\;\:\@\'\#\~\}\{\[\]\"\!\\/]', ' ', term)
term = term.replace(u'“', u'')
term = re.sub(u'[^\s]+?\s[Ee]dition', u' ', term)
term = term.replace(u'\'s', u'')
term = term.replace(u'’s', u'')
term = term.replace(u'’', u'')
term = term.replace(u'”', u'')
term = re.sub(r'[Aa]ccessed', '', term)
term = re.sub(r'meTypesetbr', '', term)
term = re.sub(r'\s+', ' ', term)
results = zotero.search(term.strip())
bare_gv.debug.print_debug(bare_gv,
"%d results for %s" % (len(results), term))
for item in results:
interactive = Interactive(bare_gv)
interactive.print_(item.JATS_format())
return
bibliography_database_instance = BibliographyDatabase(bare_gv)
bibliography_database_instance.run()
def main():
args = docopt(__doc__, version='meTypeset 0.1')
bare_gv = GV(args)
if args['--debug']:
bare_gv.debug.enable_debug(True)
bare_gv.debug.enable_prompt(Interactive(bare_gv))
if args['zotero']:
from zotero import libzotero
zotero = libzotero.LibZotero(unicode(bare_gv.settings.get_setting(u'zotero', bare_gv)), bare_gv)
term = args['<query>']
term = re.sub(r'[\-,\.\<\>\(\)\;\:\@\'\#\~\}\{\[\]\"\!\\/]', ' ', term)
term = term.replace(u'“', u'')
term = re.sub(u'[^\s]+?\s[Ee]dition', u' ', term)
term = term.replace(u'\'s', u'')
term = term.replace(u'’s', u'')
term = term.replace(u'’', u'')
term = term.replace(u'”', u'')
term = re.sub(r'[Aa]ccessed', '', term)
term = re.sub(r'meTypesetbr', '', term)
term = re.sub(r'\s+', ' ', term)
results = zotero.search(term.strip())
bare_gv.debug.print_debug(bare_gv, "%d results for %s" % (len(results), term))
for item in results:
interactive = Interactive(bare_gv)
interactive.print_(item.JATS_format())
return
bibliography_database_instance = BibliographyDatabase(bare_gv)
bibliography_database_instance.run()