示例#1
0
class TestInstrumentManagementServiceIntegration(IonIntegrationTestCase):
    def setUp(self):
        # Start container
        #print 'instantiating container'
        self._start_container()
        #container = Container()
        #print 'starting container'
        #container.start()
        #print 'started container'
        unittest  # suppress an pycharm inspector error if all unittest.skip references are commented out

        self.container.start_rel_from_url('res/deploy/r2deploy.yml')
        self.RR = ResourceRegistryServiceClient(node=self.container.node)
        self.IMS = InstrumentManagementServiceClient(node=self.container.node)
        self.IDS = IdentityManagementServiceClient(node=self.container.node)
        self.PSC = PubsubManagementServiceClient(node=self.container.node)
        self.DP = DataProductManagementServiceClient(node=self.container.node)
        self.DAMS = DataAcquisitionManagementServiceClient(
            node=self.container.node)
        self.DSC = DatasetManagementServiceClient(node=self.container.node)
        self.PDC = ProcessDispatcherServiceClient(node=self.container.node)
        self.OMS = ObservatoryManagementServiceClient(node=self.container.node)
        self.RR2 = EnhancedResourceRegistryClient(self.RR)

#    @unittest.skip('this test just for debugging setup')
#    def test_just_the_setup(self):
#        return

    @attr('EXT')
    def test_resources_associations_extensions(self):
        """
        create one of each resource and association used by IMS
        to guard against problems in ion-definitions
        """

        #stuff we control
        instrument_agent_instance_id, _ = self.RR.create(
            any_old(RT.InstrumentAgentInstance))
        instrument_agent_id, _ = self.RR.create(any_old(RT.InstrumentAgent))
        instrument_model_id, _ = self.RR.create(any_old(RT.InstrumentModel))
        instrument_device_id, _ = self.RR.create(any_old(RT.InstrumentDevice))
        instrument_site_id, _ = self.RR.create(any_old(RT.InstrumentSite))
        platform_agent_instance_id, _ = self.RR.create(
            any_old(RT.PlatformAgentInstance))
        platform_agent_id, _ = self.RR.create(any_old(RT.PlatformAgent))
        platform_site_id, _ = self.RR.create(any_old(RT.PlatformSite))
        platform_device_id, _ = self.RR.create(any_old(RT.PlatformDevice))
        platform_model_id, _ = self.RR.create(any_old(RT.PlatformModel))
        sensor_device_id, _ = self.RR.create(any_old(RT.SensorDevice))
        sensor_model_id, _ = self.RR.create(any_old(RT.SensorModel))

        #stuff we associate to
        data_producer_id, _ = self.RR.create(any_old(RT.DataProducer))
        org_id, _ = self.RR.create(any_old(RT.Org))

        #instrument_agent_instance_id #is only a target

        #instrument_agent
        self.RR.create_association(instrument_agent_id, PRED.hasModel,
                                   instrument_model_id)
        self.RR.create_association(instrument_agent_instance_id,
                                   PRED.hasAgentDefinition,
                                   instrument_agent_id)

        #instrument_device
        self.RR.create_association(instrument_device_id, PRED.hasModel,
                                   instrument_model_id)
        self.RR.create_association(instrument_device_id, PRED.hasAgentInstance,
                                   instrument_agent_instance_id)
        self.RR.create_association(instrument_device_id, PRED.hasDataProducer,
                                   data_producer_id)
        self.RR.create_association(instrument_device_id, PRED.hasDevice,
                                   sensor_device_id)
        self.RR.create_association(org_id, PRED.hasResource,
                                   instrument_device_id)

        instrument_model_id  #is only a target

        platform_agent_instance_id  #is only a target

        #platform_agent
        self.RR.create_association(platform_agent_id, PRED.hasModel,
                                   platform_model_id)
        self.RR.create_association(platform_agent_instance_id,
                                   PRED.hasAgentDefinition, platform_agent_id)

        #platform_device
        self.RR.create_association(platform_device_id, PRED.hasModel,
                                   platform_model_id)
        self.RR.create_association(platform_device_id, PRED.hasAgentInstance,
                                   platform_agent_instance_id)
        self.RR.create_association(platform_device_id, PRED.hasDevice,
                                   instrument_device_id)

        self.RR.create_association(instrument_site_id, PRED.hasDevice,
                                   instrument_device_id)
        self.RR.create_association(platform_site_id, PRED.hasDevice,
                                   platform_device_id)
        self.RR.create_association(platform_site_id, PRED.hasSite,
                                   instrument_site_id)

        platform_model_id  #is only a target

        #sensor_device
        self.RR.create_association(sensor_device_id, PRED.hasModel,
                                   sensor_model_id)
        self.RR.create_association(sensor_device_id, PRED.hasDevice,
                                   instrument_device_id)

        sensor_model_id  #is only a target

        #create a parsed product for this instrument output
        tdom, sdom = time_series_domain()
        tdom = tdom.dump()
        sdom = sdom.dump()
        dp_obj = IonObject(RT.DataProduct,
                           name='the parsed data',
                           description='ctd stream test',
                           processing_level_code='Parsed_Canonical',
                           temporal_domain=tdom,
                           spatial_domain=sdom)
        pdict_id = self.DSC.read_parameter_dictionary_by_name(
            'ctd_parsed_param_dict', id_only=True)
        parsed_stream_def_id = self.PSC.create_stream_definition(
            name='parsed', parameter_dictionary_id=pdict_id)
        data_product_id1 = self.DP.create_data_product(
            data_product=dp_obj, stream_definition_id=parsed_stream_def_id)
        log.debug('new dp_id = %s', data_product_id1)

        self.DAMS.assign_data_product(input_resource_id=instrument_device_id,
                                      data_product_id=data_product_id1)

        def addInstOwner(inst_id, subject):

            actor_identity_obj = any_old(RT.ActorIdentity, {"name": subject})
            user_id = self.IDS.create_actor_identity(actor_identity_obj)
            user_info_obj = any_old(RT.UserInfo)
            user_info_id = self.IDS.create_user_info(user_id, user_info_obj)

            self.RR.create_association(inst_id, PRED.hasOwner, user_id)

        #Testing multiple instrument owners
        addInstOwner(
            instrument_device_id,
            "/DC=org/DC=cilogon/C=US/O=ProtectNetwork/CN=Roger Unwin A254")
        addInstOwner(
            instrument_device_id,
            "/DC=org/DC=cilogon/C=US/O=ProtectNetwork/CN=Bob Cumbers A256")

        extended_instrument = self.IMS.get_instrument_device_extension(
            instrument_device_id)

        self.assertEqual(instrument_device_id, extended_instrument._id)
        self.assertEqual(len(extended_instrument.owners), 2)
        self.assertEqual(extended_instrument.instrument_model._id,
                         instrument_model_id)

        # Lifecycle
        self.assertEquals(len(extended_instrument.lcstate_transitions), 5)
        self.assertEquals(
            set(extended_instrument.lcstate_transitions.keys()),
            set(['develop', 'deploy', 'retire', 'plan', 'integrate']))
        self.assertEquals(len(extended_instrument.availability_transitions), 2)
        self.assertEquals(
            set(extended_instrument.availability_transitions.keys()),
            set(['enable', 'announce']))

        # Verify that computed attributes exist for the extended instrument
        self.assertIsInstance(
            extended_instrument.computed.last_data_received_datetime,
            ComputedFloatValue)
        self.assertIsInstance(extended_instrument.computed.uptime,
                              ComputedStringValue)

        self.assertIsInstance(
            extended_instrument.computed.power_status_roll_up,
            ComputedIntValue)
        self.assertIsInstance(
            extended_instrument.computed.communications_status_roll_up,
            ComputedIntValue)
        self.assertIsInstance(extended_instrument.computed.data_status_roll_up,
                              ComputedIntValue)
        self.assertIsInstance(
            extended_instrument.computed.location_status_roll_up,
            ComputedIntValue)

        log.debug("extended_instrument.computed: %s",
                  extended_instrument.computed)

        #check model
        inst_model_obj = self.RR.read(instrument_model_id)
        self.assertEqual(inst_model_obj.name,
                         extended_instrument.instrument_model.name)

        #check agent instance
        inst_agent_instance_obj = self.RR.read(instrument_agent_instance_id)
        self.assertEqual(inst_agent_instance_obj.name,
                         extended_instrument.agent_instance.name)

        #check agent
        inst_agent_obj = self.RR.read(instrument_agent_id)
        #compound assoc return list of lists so check the first element
        self.assertEqual(inst_agent_obj.name,
                         extended_instrument.instrument_agent.name)

        #check platform device
        plat_device_obj = self.RR.read(platform_device_id)
        self.assertEqual(plat_device_obj.name,
                         extended_instrument.platform_device.name)

        extended_platform = self.IMS.get_platform_device_extension(
            platform_device_id)

        self.assertEqual(1, len(extended_platform.portals))
        self.assertEqual(1, len(extended_platform.portal_instruments))
        #self.assertEqual(1, len(extended_platform.computed.portal_status.value)) # no agent started so NO statuses reported
        self.assertEqual(1, len(extended_platform.instrument_devices))
        self.assertEqual(instrument_device_id,
                         extended_platform.instrument_devices[0]._id)
        self.assertEqual(1, len(extended_platform.instrument_models))
        self.assertEqual(instrument_model_id,
                         extended_platform.instrument_models[0]._id)
        self.assertEquals(extended_platform.platform_agent._id,
                          platform_agent_id)

        self.assertEquals(len(extended_platform.lcstate_transitions), 5)
        self.assertEquals(
            set(extended_platform.lcstate_transitions.keys()),
            set(['develop', 'deploy', 'retire', 'plan', 'integrate']))
        self.assertEquals(len(extended_platform.availability_transitions), 2)
        self.assertEquals(
            set(extended_platform.availability_transitions.keys()),
            set(['enable', 'announce']))

        #check sensor devices
        self.assertEqual(1, len(extended_instrument.sensor_devices))

        #check data_product_parameters_set
        self.assertEqual(
            ComputedValueAvailability.PROVIDED,
            extended_instrument.computed.data_product_parameters_set.status)
        self.assertTrue('Parsed_Canonical' in extended_instrument.computed.
                        data_product_parameters_set.value)
        # the ctd parameters should include 'temp'
        self.assertTrue('temp' in extended_instrument.computed.
                        data_product_parameters_set.value['Parsed_Canonical'])

        #none of these will work because there is no agent
        #        self.assertEqual(ComputedValueAvailability.NOTAVAILABLE,
        #                         extended_instrument.computed.firmware_version.status)
        #        self.assertEqual(ComputedValueAvailability.NOTAVAILABLE,
        #                         extended_instrument.computed.operational_state.status)
        #        self.assertEqual(ComputedValueAvailability.PROVIDED,
        #                         extended_instrument.computed.power_status_roll_up.status)
        #        self.assertEqual(ComputedValueAvailability.PROVIDED,
        #                         extended_instrument.computed.communications_status_roll_up.status)
        #        self.assertEqual(ComputedValueAvailability.PROVIDED,
        #                         extended_instrument.computed.data_status_roll_up.status)
        #        self.assertEqual(DeviceStatusType.STATUS_OK,
        #                        extended_instrument.computed.data_status_roll_up.value)
        #        self.assertEqual(ComputedValueAvailability.PROVIDED,
        #                         extended_instrument.computed.location_status_roll_up.status)

        #        self.assertEqual(ComputedValueAvailability.PROVIDED,
        #                         extended_instrument.computed.recent_events.status)
        #        self.assertEqual([], extended_instrument.computed.recent_events.value)

        # cleanup
        c = DotDict()
        c.resource_registry = self.RR
        self.RR2.pluck(instrument_agent_id)
        self.RR2.pluck(instrument_model_id)
        self.RR2.pluck(instrument_device_id)
        self.RR2.pluck(platform_agent_id)
        self.RR2.pluck(sensor_device_id)
        self.IMS.force_delete_instrument_agent(instrument_agent_id)
        self.IMS.force_delete_instrument_model(instrument_model_id)
        self.IMS.force_delete_instrument_device(instrument_device_id)
        self.IMS.force_delete_platform_agent_instance(
            platform_agent_instance_id)
        self.IMS.force_delete_platform_agent(platform_agent_id)
        self.OMS.force_delete_instrument_site(instrument_site_id)
        self.OMS.force_delete_platform_site(platform_site_id)
        self.IMS.force_delete_platform_device(platform_device_id)
        self.IMS.force_delete_platform_model(platform_model_id)
        self.IMS.force_delete_sensor_device(sensor_device_id)
        self.IMS.force_delete_sensor_model(sensor_model_id)

        #stuff we associate to
        self.RR.delete(data_producer_id)
        self.RR.delete(org_id)

    def test_custom_attributes(self):
        """
        Test assignment of custom attributes
        """

        instModel_obj = IonObject(OT.CustomAttribute,
                                  name='SBE37IMModelAttr',
                                  description="model custom attr")

        instrument_model_id, _ = self.RR.create(
            any_old(RT.InstrumentModel,
                    {"custom_attributes": [instModel_obj]}))
        instrument_device_id, _ = self.RR.create(
            any_old(
                RT.InstrumentDevice, {
                    "custom_attributes": {
                        "favorite_color": "red",
                        "bogus_attr": "should raise warning"
                    }
                }))

        self.IMS.assign_instrument_model_to_instrument_device(
            instrument_model_id, instrument_device_id)

        # cleanup
        self.IMS.force_delete_instrument_device(instrument_device_id)
        self.IMS.force_delete_instrument_model(instrument_model_id)

    def _get_datastore(self, dataset_id):
        dataset = self.DSC.read_dataset(dataset_id)
        datastore_name = dataset.datastore_name
        datastore = self.container.datastore_manager.get_datastore(
            datastore_name, DataStore.DS_PROFILE.SCIDATA)
        return datastore

    def test_data_producer(self):
        idevice_id = self.IMS.create_instrument_device(
            any_old(RT.InstrumentDevice))
        self.assertEqual(
            1,
            len(
                self.RR2.
                find_data_producer_ids_of_instrument_device_using_has_data_producer(
                    idevice_id)))

        pdevice_id = self.IMS.create_platform_device(any_old(
            RT.PlatformDevice))
        self.assertEqual(
            1,
            len(
                self.RR2.
                find_data_producer_ids_of_platform_device_using_has_data_producer(
                    pdevice_id)))

    @attr('PREP')
    def test_prepare_resource_support(self):
        """
        create one of each resource and association used by IMS
        to guard against problems in ion-definitions
        """

        #stuff we control
        instrument_agent_instance_id, _ = self.RR.create(
            any_old(RT.InstrumentAgentInstance))
        instrument_agent_id, _ = self.RR.create(any_old(RT.InstrumentAgent))
        instrument_model_id, _ = self.RR.create(any_old(RT.InstrumentModel))
        instrument_device_id, _ = self.RR.create(any_old(RT.InstrumentDevice))
        platform_agent_instance_id, _ = self.RR.create(
            any_old(RT.PlatformAgentInstance))
        platform_agent_id, _ = self.RR.create(any_old(RT.PlatformAgent))
        platform_device_id, _ = self.RR.create(any_old(RT.PlatformDevice))
        platform_model_id, _ = self.RR.create(any_old(RT.PlatformModel))
        sensor_device_id, _ = self.RR.create(any_old(RT.SensorDevice))
        sensor_model_id, _ = self.RR.create(any_old(RT.SensorModel))

        instrument_device2_id, _ = self.RR.create(any_old(RT.InstrumentDevice))
        instrument_device3_id, _ = self.RR.create(any_old(RT.InstrumentDevice))

        platform_device2_id, _ = self.RR.create(any_old(RT.PlatformDevice))
        sensor_device2_id, _ = self.RR.create(any_old(RT.SensorDevice))

        #stuff we associate to
        data_producer_id, _ = self.RR.create(any_old(RT.DataProducer))
        org_id, _ = self.RR.create(any_old(RT.Org))

        #instrument_agent_instance_id #is only a target

        #instrument_agent
        self.RR.create_association(instrument_agent_id, PRED.hasModel,
                                   instrument_model_id)
        self.RR.create_association(instrument_agent_instance_id,
                                   PRED.hasAgentDefinition,
                                   instrument_agent_id)

        #instrument_device
        self.RR.create_association(instrument_device_id, PRED.hasModel,
                                   instrument_model_id)
        self.RR.create_association(instrument_device_id, PRED.hasAgentInstance,
                                   instrument_agent_instance_id)
        self.RR.create_association(instrument_device_id, PRED.hasDataProducer,
                                   data_producer_id)
        self.RR.create_association(instrument_device_id, PRED.hasDevice,
                                   sensor_device_id)
        self.RR.create_association(org_id, PRED.hasResource,
                                   instrument_device_id)

        self.RR.create_association(instrument_device2_id, PRED.hasModel,
                                   instrument_model_id)
        self.RR.create_association(org_id, PRED.hasResource,
                                   instrument_device2_id)

        instrument_model_id  #is only a target

        platform_agent_instance_id  #is only a target

        #platform_agent
        self.RR.create_association(platform_agent_id, PRED.hasModel,
                                   platform_model_id)
        self.RR.create_association(platform_agent_instance_id,
                                   PRED.hasAgentDefinition, platform_agent_id)

        #platform_device
        self.RR.create_association(platform_device_id, PRED.hasModel,
                                   platform_model_id)
        self.RR.create_association(platform_device_id, PRED.hasAgentInstance,
                                   platform_agent_instance_id)
        self.RR.create_association(platform_device_id, PRED.hasDevice,
                                   instrument_device_id)

        self.RR.create_association(platform_device2_id, PRED.hasModel,
                                   platform_model_id)
        self.RR.create_association(platform_device2_id, PRED.hasDevice,
                                   instrument_device2_id)

        platform_model_id  #is only a target

        #sensor_device
        self.RR.create_association(sensor_device_id, PRED.hasModel,
                                   sensor_model_id)
        self.RR.create_association(sensor_device_id, PRED.hasDevice,
                                   instrument_device_id)

        self.RR.create_association(sensor_device2_id, PRED.hasModel,
                                   sensor_model_id)
        self.RR.create_association(sensor_device2_id, PRED.hasDevice,
                                   instrument_device2_id)

        sensor_model_id  #is only a target

        #set lcstate - used for testing prepare - not setting all to DEVELOP, only some
        self.RR.execute_lifecycle_transition(instrument_agent_id, LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(instrument_device_id, LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(instrument_device2_id,
                                             LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(platform_device_id, LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(platform_device2_id, LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(platform_agent_id, LCE.DEVELOP)

        #create a parsed product for this instrument output
        tdom, sdom = time_series_domain()
        tdom = tdom.dump()
        sdom = sdom.dump()
        dp_obj = IonObject(RT.DataProduct,
                           name='the parsed data',
                           description='ctd stream test',
                           processing_level_code='Parsed_Canonical',
                           temporal_domain=tdom,
                           spatial_domain=sdom)
        pdict_id = self.DSC.read_parameter_dictionary_by_name(
            'ctd_parsed_param_dict', id_only=True)
        parsed_stream_def_id = self.PSC.create_stream_definition(
            name='parsed', parameter_dictionary_id=pdict_id)
        data_product_id1 = self.DP.create_data_product(
            data_product=dp_obj, stream_definition_id=parsed_stream_def_id)
        log.debug('new dp_id = %s', data_product_id1)

        self.DAMS.assign_data_product(input_resource_id=instrument_device_id,
                                      data_product_id=data_product_id1)

        def addInstOwner(inst_id, subject):

            actor_identity_obj = any_old(RT.ActorIdentity, {"name": subject})
            user_id = self.IDS.create_actor_identity(actor_identity_obj)
            user_info_obj = any_old(RT.UserInfo)
            user_info_id = self.IDS.create_user_info(user_id, user_info_obj)

            self.RR.create_association(inst_id, PRED.hasOwner, user_id)

        #Testing multiple instrument owners
        addInstOwner(
            instrument_device_id,
            "/DC=org/DC=cilogon/C=US/O=ProtectNetwork/CN=Roger Unwin A254")
        addInstOwner(
            instrument_device_id,
            "/DC=org/DC=cilogon/C=US/O=ProtectNetwork/CN=Bob Cumbers A256")

        def ion_object_encoder(obj):
            return obj.__dict__

        #First call to create
        instrument_data = self.IMS.prepare_instrument_device_support()

        #print simplejson.dumps(instrument_data, default=ion_object_encoder, indent=2)

        self.assertEqual(instrument_data._id, '')
        self.assertEqual(instrument_data.type_,
                         OT.InstrumentDevicePrepareSupport)
        self.assertEqual(
            len(instrument_data.associations['InstrumentModel'].resources), 1)
        self.assertEqual(
            instrument_data.associations['InstrumentModel'].resources[0]._id,
            instrument_model_id)
        self.assertEqual(
            len(instrument_data.associations['InstrumentAgentInstance'].
                resources), 1)
        self.assertEqual(
            instrument_data.associations['InstrumentAgentInstance'].
            resources[0]._id, instrument_agent_instance_id)
        self.assertEqual(
            len(instrument_data.associations['InstrumentModel'].
                associated_resources), 0)
        self.assertEqual(
            len(instrument_data.associations['InstrumentAgentInstance'].
                associated_resources), 0)
        self.assertEqual(
            len(instrument_data.associations['SensorDevice'].resources), 0)

        #Next call to update
        instrument_data = self.IMS.prepare_instrument_device_support(
            instrument_device_id)

        #print 'Update results'
        #print simplejson.dumps(instrument_data, default=ion_object_encoder, indent=2)

        self.assertEqual(instrument_data._id, instrument_device_id)
        self.assertEqual(instrument_data.type_,
                         OT.InstrumentDevicePrepareSupport)
        self.assertEqual(
            len(instrument_data.associations['InstrumentModel'].resources), 1)
        self.assertEqual(
            instrument_data.associations['InstrumentModel'].resources[0]._id,
            instrument_model_id)
        self.assertEqual(
            len(instrument_data.associations['InstrumentAgentInstance'].
                resources), 1)
        self.assertEqual(
            instrument_data.associations['InstrumentAgentInstance'].
            resources[0]._id, instrument_agent_instance_id)
        self.assertEqual(
            len(instrument_data.associations['InstrumentModel'].
                associated_resources), 1)
        self.assertEqual(
            instrument_data.associations['InstrumentModel'].
            associated_resources[0].s, instrument_device_id)
        self.assertEqual(
            instrument_data.associations['InstrumentModel'].
            associated_resources[0].o, instrument_model_id)
        self.assertEqual(
            len(instrument_data.associations['InstrumentAgentInstance'].
                associated_resources), 1)
        self.assertEqual(
            instrument_data.associations['InstrumentAgentInstance'].
            associated_resources[0].o, instrument_agent_instance_id)
        self.assertEqual(
            instrument_data.associations['InstrumentAgentInstance'].
            associated_resources[0].s, instrument_device_id)
        self.assertEqual(
            len(instrument_data.associations['SensorDevice'].resources), 1)
        self.assertEqual(
            instrument_data.associations['SensorDevice'].resources[0]._id,
            sensor_device_id)
        self.assertEqual(
            len(instrument_data.associations['SensorDevice'].
                associated_resources), 1)
        self.assertEqual(
            instrument_data.associations['SensorDevice'].
            associated_resources[0].o, instrument_device_id)
        self.assertEqual(
            instrument_data.associations['SensorDevice'].
            associated_resources[0].s, sensor_device_id)
        self.assertEqual(
            instrument_data.associations['InstrumentModel'].assign_request.
            request_parameters['instrument_device_id'], instrument_device_id)

        #test prepare for create of instrument agent instance
        instrument_agent_data = self.IMS.prepare_instrument_agent_instance_support(
        )

        #print 'Update results'
        #print simplejson.dumps(instrument_agent_data, default=ion_object_encoder, indent=2)

        self.assertEqual(instrument_agent_data._id, '')
        self.assertEqual(instrument_agent_data.type_,
                         OT.InstrumentAgentInstancePrepareSupport)
        self.assertEqual(
            len(instrument_agent_data.associations['InstrumentDevice'].
                resources), 2)
        self.assertEqual(
            len(instrument_agent_data.associations['InstrumentAgent'].resources
                ), 1)
        self.assertEqual(
            instrument_agent_data.associations['InstrumentAgent'].resources[0].
            _id, instrument_agent_id)
        self.assertEqual(
            len(instrument_agent_data.associations['InstrumentDevice'].
                associated_resources), 0)
        self.assertEqual(
            len(instrument_agent_data.associations['InstrumentAgent'].
                associated_resources), 0)

        #test prepare for update of instrument agent instance to see if it is associated with the instrument that was created
        instrument_agent_data = self.IMS.prepare_instrument_agent_instance_support(
            instrument_agent_instance_id=instrument_agent_instance_id)

        #print 'Update results'
        #print simplejson.dumps(instrument_agent_data, default=ion_object_encoder, indent=2)

        self.assertEqual(instrument_agent_data._id,
                         instrument_agent_instance_id)
        self.assertEqual(instrument_agent_data.type_,
                         OT.InstrumentAgentInstancePrepareSupport)
        self.assertEqual(
            len(instrument_agent_data.associations['InstrumentDevice'].
                resources), 3)
        self.assertEqual(
            len(instrument_agent_data.associations['InstrumentAgent'].resources
                ), 1)
        self.assertEqual(
            instrument_agent_data.associations['InstrumentAgent'].resources[0].
            _id, instrument_agent_id)
        self.assertEqual(
            len(instrument_agent_data.associations['InstrumentDevice'].
                associated_resources), 1)
        self.assertEqual(
            instrument_agent_data.associations['InstrumentDevice'].
            associated_resources[0].s, instrument_device_id)
        self.assertEqual(
            instrument_agent_data.associations['InstrumentDevice'].
            associated_resources[0].o, instrument_agent_instance_id)
        self.assertEqual(
            len(instrument_agent_data.associations['InstrumentAgent'].
                associated_resources), 1)
        self.assertEqual(
            instrument_agent_data.associations['InstrumentAgent'].
            associated_resources[0].o, instrument_agent_id)
        self.assertEqual(
            instrument_agent_data.associations['InstrumentAgent'].
            associated_resources[0].s, instrument_agent_instance_id)
        self.assertEqual(
            instrument_agent_data.associations['InstrumentAgent'].
            assign_request.request_parameters['instrument_agent_instance_id'],
            instrument_agent_instance_id)

        #test prepare for update of data product to see if it is associated with the instrument that was created
        data_product_data = self.DP.prepare_data_product_support(
            data_product_id1)

        #print simplejson.dumps(data_product_data, default=ion_object_encoder, indent=2)

        self.assertEqual(data_product_data._id, data_product_id1)
        self.assertEqual(data_product_data.type_, OT.DataProductPrepareSupport)
        self.assertEqual(
            len(data_product_data.associations['StreamDefinition'].resources),
            1)

        self.assertEqual(
            len(data_product_data.associations['Dataset'].resources), 0)

        self.assertEqual(
            len(data_product_data.associations['StreamDefinition'].
                associated_resources), 1)
        self.assertEqual(
            data_product_data.associations['StreamDefinition'].
            associated_resources[0].s, data_product_id1)

        self.assertEqual(
            len(data_product_data.associations['Dataset'].associated_resources
                ), 0)

        self.assertEqual(
            len(data_product_data.
                associations['InstrumentDeviceHasOutputProduct'].resources), 3)

        self.assertEqual(
            len(data_product_data.associations[
                'InstrumentDeviceHasOutputProduct'].associated_resources), 1)
        self.assertEqual(
            data_product_data.associations['InstrumentDeviceHasOutputProduct'].
            associated_resources[0].s, instrument_device_id)
        self.assertEqual(
            data_product_data.associations['InstrumentDeviceHasOutputProduct'].
            associated_resources[0].o, data_product_id1)

        self.assertEqual(
            len(data_product_data.associations['PlatformDevice'].resources), 2)

        platform_data = self.IMS.prepare_platform_device_support()

        #print simplejson.dumps(platform_data, default=ion_object_encoder, indent=2)

        self.assertEqual(platform_data._id, '')
        self.assertEqual(platform_data.type_, OT.PlatformDevicePrepareSupport)
        self.assertEqual(
            len(platform_data.associations['PlatformModel'].resources), 1)
        self.assertEqual(
            platform_data.associations['PlatformModel'].resources[0]._id,
            platform_model_id)
        self.assertEqual(
            len(platform_data.associations['PlatformAgentInstance'].resources),
            1)
        self.assertEqual(
            platform_data.associations['PlatformAgentInstance'].resources[0].
            _id, platform_agent_instance_id)
        self.assertEqual(
            len(platform_data.associations['PlatformModel'].
                associated_resources), 0)
        self.assertEqual(
            len(platform_data.associations['PlatformAgentInstance'].
                associated_resources), 0)
        self.assertEqual(
            len(platform_data.associations['InstrumentDevice'].resources), 1)

        platform_data = self.IMS.prepare_platform_device_support(
            platform_device_id)

        #print simplejson.dumps(platform_data, default=ion_object_encoder, indent=2)

        self.assertEqual(platform_data._id, platform_device_id)
        self.assertEqual(platform_data.type_, OT.PlatformDevicePrepareSupport)
        self.assertEqual(
            len(platform_data.associations['PlatformModel'].resources), 1)
        self.assertEqual(
            platform_data.associations['PlatformModel'].resources[0]._id,
            platform_model_id)
        self.assertEqual(
            len(platform_data.associations['PlatformAgentInstance'].resources),
            1)
        self.assertEqual(
            platform_data.associations['PlatformAgentInstance'].resources[0].
            _id, platform_agent_instance_id)
        self.assertEqual(
            len(platform_data.associations['PlatformModel'].
                associated_resources), 1)
        self.assertEqual(
            platform_data.associations['PlatformModel'].
            associated_resources[0].s, platform_device_id)
        self.assertEqual(
            platform_data.associations['PlatformModel'].
            associated_resources[0].o, platform_model_id)
        self.assertEqual(
            len(platform_data.associations['PlatformAgentInstance'].
                associated_resources), 1)
        self.assertEqual(
            platform_data.associations['PlatformAgentInstance'].
            associated_resources[0].o, platform_agent_instance_id)
        self.assertEqual(
            platform_data.associations['PlatformAgentInstance'].
            associated_resources[0].s, platform_device_id)
        self.assertEqual(
            len(platform_data.associations['InstrumentDevice'].resources), 2)
        #self.assertEqual(len(platform_data.associations['InstrumentDevice'].associated_resources), 1)
        #self.assertEqual(platform_data.associations['InstrumentDevice'].associated_resources[0].s, platform_device_id)
        #self.assertEqual(platform_data.associations['InstrumentDevice'].associated_resources[0].o, instrument_device_id)
        self.assertEqual(
            platform_data.associations['PlatformModel'].assign_request.
            request_parameters['platform_device_id'], platform_device_id)

        # cleanup
        c = DotDict()
        c.resource_registry = self.RR
        self.RR2.pluck(instrument_agent_id)
        self.RR2.pluck(instrument_model_id)
        self.RR2.pluck(instrument_device_id)
        self.RR2.pluck(platform_agent_id)
        self.RR2.pluck(sensor_device_id)
        self.RR2.pluck(sensor_device2_id)
        self.IMS.force_delete_instrument_agent(instrument_agent_id)
        self.IMS.force_delete_instrument_model(instrument_model_id)
        self.IMS.force_delete_instrument_device(instrument_device_id)
        self.IMS.force_delete_instrument_device(instrument_device2_id)
        self.IMS.force_delete_platform_agent_instance(
            platform_agent_instance_id)
        self.IMS.force_delete_platform_agent(platform_agent_id)
        self.IMS.force_delete_platform_device(platform_device_id)
        self.IMS.force_delete_platform_device(platform_device2_id)
        self.IMS.force_delete_platform_model(platform_model_id)
        self.IMS.force_delete_sensor_device(sensor_device_id)
        self.IMS.force_delete_sensor_device(sensor_device2_id)
        self.IMS.force_delete_sensor_model(sensor_model_id)

        #stuff we associate to
        self.RR.delete(data_producer_id)
        self.RR.delete(org_id)
class TestObservatoryManagementServiceIntegration(IonIntegrationTestCase):

    def setUp(self):
        # Start container
        #print 'instantiating container'
        self._start_container()
        #container = Container()
        #print 'starting container'
        #container.start()
        #print 'started container'

        self.container.start_rel_from_url('res/deploy/r2deploy.yml')
        self.RR = ResourceRegistryServiceClient(node=self.container.node)
        self.RR2 = EnhancedResourceRegistryClient(self.RR)
        self.OMS = ObservatoryManagementServiceClient(node=self.container.node)
        self.org_management_service = OrgManagementServiceClient(node=self.container.node)
        self.IMS =  InstrumentManagementServiceClient(node=self.container.node)
        self.dpclient = DataProductManagementServiceClient(node=self.container.node)
        self.pubsubcli =  PubsubManagementServiceClient(node=self.container.node)
        self.damsclient = DataAcquisitionManagementServiceClient(node=self.container.node)
        self.dataset_management = DatasetManagementServiceClient()
        #print 'TestObservatoryManagementServiceIntegration: started services'

        self.event_publisher = EventPublisher()

#    @unittest.skip('this exists only for debugging the launch process')
#    def test_just_the_setup(self):
#        return

    def destroy(self, resource_ids):
        self.OMS.force_delete_observatory(resource_ids.observatory_id)
        self.OMS.force_delete_subsite(resource_ids.subsite_id)
        self.OMS.force_delete_subsite(resource_ids.subsite2_id)
        self.OMS.force_delete_subsite(resource_ids.subsiteb_id)
        self.OMS.force_delete_subsite(resource_ids.subsitez_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb2_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site2_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_siteb3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site4_id)

    #@unittest.skip('targeting')
    def test_observatory_management(self):
        resources = self._make_associations()

        self._do_test_find_related_sites(resources)

        self._do_test_get_sites_devices_status(resources)

        self._do_test_find_site_data_products(resources)

        self._do_test_find_related_frames_of_reference(resources)

        self._do_test_create_geospatial_point_center(resources)

        self._do_test_find_observatory_org(resources)

        self.destroy(resources)

    def _do_test_find_related_sites(self, resources):

        site_resources, site_children = self.OMS.find_related_sites(resources.org_id)

        #import sys, pprint
        #print >> sys.stderr, pprint.pformat(site_resources)
        #print >> sys.stderr, pprint.pformat(site_children)

        #self.assertIn(resources.org_id, site_resources)
        self.assertIn(resources.observatory_id, site_resources)
        self.assertIn(resources.subsite_id, site_resources)
        self.assertIn(resources.subsite_id, site_resources)
        self.assertIn(resources.subsite2_id, site_resources)
        self.assertIn(resources.platform_site_id, site_resources)
        self.assertIn(resources.instrument_site_id, site_resources)
        self.assertEquals(len(site_resources), 13)

        self.assertEquals(site_resources[resources.observatory_id].type_, RT.Observatory)

        self.assertIn(resources.org_id, site_children)
        self.assertIn(resources.observatory_id, site_children)
        self.assertIn(resources.subsite_id, site_children)
        self.assertIn(resources.subsite_id, site_children)
        self.assertIn(resources.subsite2_id, site_children)
        self.assertIn(resources.platform_site_id, site_children)
        self.assertNotIn(resources.instrument_site_id, site_children)
        self.assertEquals(len(site_children), 9)

        self.assertIsInstance(site_children[resources.subsite_id], list)
        self.assertEquals(len(site_children[resources.subsite_id]), 2)

    def _do_test_get_sites_devices_status(self, resources):

        result_dict = self.OMS.get_sites_devices_status(resources.org_id)

        site_resources = result_dict.get("site_resources", None)
        site_children = result_dict.get("site_children", None)

        self.assertEquals(len(site_resources), 14)
        self.assertEquals(len(site_children), 9)

        result_dict = self.OMS.get_sites_devices_status(resources.org_id, include_devices=True, include_status=True)

        log.debug("RESULT DICT: %s", result_dict.keys())
        site_resources = result_dict.get("site_resources", None)
        site_children = result_dict.get("site_children", None)
        site_status = result_dict.get("site_status", None)

        self.assertEquals(len(site_resources), 14)
        self.assertEquals(len(site_children), 9)


        result_dict = self.OMS.get_sites_devices_status(resources.observatory_id, include_devices=True, include_status=True)

        site_resources = result_dict.get("site_resources")
        site_children = result_dict.get("site_children")
        site_status = result_dict.get("site_status")

        self.assertEquals(len(site_resources), 13)
        self.assertEquals(len(site_children), 8)


    def _do_test_find_site_data_products(self, resources):
        res_dict = self.OMS.find_site_data_products(resources.org_id)

        #import sys, pprint
        #print >> sys.stderr, pprint.pformat(res_dict)

        self.assertIsNone(res_dict['data_product_resources'])
        self.assertIn(resources.platform_device_id, res_dict['device_data_products'])
        self.assertIn(resources.instrument_device_id, res_dict['device_data_products'])

    #@unittest.skip('targeting')
    def _do_test_find_related_frames_of_reference(self, stuff):
        # finding subordinates gives a dict of obj lists, convert objs to ids
        def idify(adict):
            ids = {}
            for k, v in adict.iteritems():
                ids[k] = []
                for obj in v:
                    ids[k].append(obj._id)

            return ids

        # a short version of the function we're testing, with id-ify
        def short(resource_id, output_types):
            ret = self.OMS.find_related_frames_of_reference(resource_id,
                                                            output_types)
            return idify(ret)
            
            
        #set up associations first
        stuff = self._make_associations()
        #basic traversal of tree from instrument to platform
        ids = short(stuff.instrument_site_id, [RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])

        #since this is the first search, just make sure the input inst_id got stripped
        if RT.InstrumentSite in ids:
            self.assertNotIn(stuff.instrument_site_id, ids[RT.InstrumentSite])

        #basic traversal of tree from platform to instrument
        ids = short(stuff.platform_siteb_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])
        self.assertNotIn(stuff.instrument_site2_id, ids[RT.InstrumentSite])


        #full traversal of tree from observatory down to instrument
        ids = short(stuff.observatory_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])


        #full traversal of tree from instrument to observatory
        ids = short(stuff.instrument_site_id, [RT.Observatory])
        self.assertIn(RT.Observatory, ids)
        self.assertIn(stuff.observatory_id, ids[RT.Observatory])


        #partial traversal, only down to platform
        ids = short(stuff.observatory_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site3_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(RT.InstrumentSite, ids)


        #partial traversal, only down to platform
        ids = short(stuff.instrument_site_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertNotIn(RT.Observatory, ids)

        self.destroy(stuff)

    def _make_associations(self):
        """
        create one of each resource and association used by OMS
        to guard against problems in ion-definitions
        """

        #raise unittest.SkipTest("https://jira.oceanobservatories.org/tasks/browse/CISWCORE-41")
        

        """
        the tree we're creating (observatory, sites, platforms, instruments)

        rows are lettered, colums numbered.  
         - first row is implied a
         - first column is implied 1
         - site Z, just because 

        O--Sz
        |
        S--S2--P3--I4
        |
        Sb-Pb2-Ib3
        |
        P--I2 <- PlatformDevice, InstrumentDevice2
        |
        Pb <- PlatformDevice b
        |
        I <- InstrumentDevice

        """

        org_id = self.OMS.create_marine_facility(any_old(RT.Org))

        def create_under_org(resource_type, extra_fields=None):
            obj = any_old(resource_type, extra_fields)

            if RT.InstrumentDevice == resource_type:
                resource_id = self.IMS.create_instrument_device(obj)
            else:
                resource_id, _ = self.RR.create(obj)

            self.OMS.assign_resource_to_observatory_org(resource_id=resource_id, org_id=org_id)
            return resource_id

        #stuff we control
        observatory_id          = create_under_org(RT.Observatory)
        subsite_id              = create_under_org(RT.Subsite)
        subsite2_id             = create_under_org(RT.Subsite)
        subsiteb_id             = create_under_org(RT.Subsite)
        subsitez_id             = create_under_org(RT.Subsite)
        platform_site_id        = create_under_org(RT.PlatformSite)
        platform_siteb_id       = create_under_org(RT.PlatformSite)
        platform_siteb2_id      = create_under_org(RT.PlatformSite)
        platform_site3_id       = create_under_org(RT.PlatformSite)
        instrument_site_id      = create_under_org(RT.InstrumentSite)
        instrument_site2_id     = create_under_org(RT.InstrumentSite)
        instrument_siteb3_id    = create_under_org(RT.InstrumentSite)
        instrument_site4_id     = create_under_org(RT.InstrumentSite)

        #stuff we associate to
        instrument_device_id    = create_under_org(RT.InstrumentDevice)
        instrument_device2_id   = create_under_org(RT.InstrumentDevice)
        platform_device_id      = create_under_org(RT.PlatformDevice)
        platform_deviceb_id     = create_under_org(RT.PlatformDevice)
        instrument_model_id, _  = self.RR.create(any_old(RT.InstrumentModel))
        platform_model_id, _    = self.RR.create(any_old(RT.PlatformModel))
        deployment_id, _        = self.RR.create(any_old(RT.Deployment))

        #observatory
        self.RR.create_association(observatory_id, PRED.hasSite, subsite_id)
        self.RR.create_association(observatory_id, PRED.hasSite, subsitez_id)

        #site
        self.RR.create_association(subsite_id, PRED.hasSite, subsite2_id)
        self.RR.create_association(subsite_id, PRED.hasSite, subsiteb_id)
        self.RR.create_association(subsite2_id, PRED.hasSite, platform_site3_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite, platform_siteb2_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite, platform_site_id)
        
        #platform_site(s)
        self.RR.create_association(platform_site3_id, PRED.hasSite, instrument_site4_id)
        self.RR.create_association(platform_siteb2_id, PRED.hasSite, instrument_siteb3_id)
        self.RR.create_association(platform_site_id, PRED.hasSite, instrument_site2_id)
        self.RR.create_association(platform_site_id, PRED.hasSite, platform_siteb_id)
        self.RR.create_association(platform_siteb_id, PRED.hasSite, instrument_site_id)

        self.RR.create_association(platform_siteb_id, PRED.hasDevice, platform_deviceb_id)
        #test network parent link
        self.OMS.assign_device_to_network_parent(platform_device_id, platform_deviceb_id)

        self.RR.create_association(platform_site_id, PRED.hasModel, platform_model_id)
        self.RR.create_association(platform_site_id, PRED.hasDevice, platform_device_id)
        self.RR.create_association(platform_site_id, PRED.hasDeployment, deployment_id)

        #instrument_site(s)
        self.RR.create_association(instrument_site_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_site_id, PRED.hasDevice, instrument_device_id)
        self.RR.create_association(instrument_site_id, PRED.hasDeployment, deployment_id)

        self.RR.create_association(instrument_site2_id, PRED.hasDevice, instrument_device2_id)

        #platform_device
        self.RR.create_association(platform_device_id, PRED.hasModel, platform_model_id)

        #instrument_device
        self.RR.create_association(instrument_device_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_device2_id, PRED.hasModel, instrument_model_id)

        ret = DotDict()
        ret.org_id                = org_id
        ret.observatory_id        = observatory_id
        ret.subsite_id            = subsite_id
        ret.subsite2_id           = subsite2_id
        ret.subsiteb_id           = subsiteb_id
        ret.subsitez_id           = subsitez_id
        ret.platform_site_id      = platform_site_id
        ret.platform_siteb_id     = platform_siteb_id
        ret.platform_siteb2_id    = platform_siteb2_id
        ret.platform_site3_id     = platform_site3_id
        ret.instrument_site_id    = instrument_site_id
        ret.instrument_site2_id   = instrument_site2_id
        ret.instrument_siteb3_id  = instrument_siteb3_id
        ret.instrument_site4_id   = instrument_site4_id

        ret.instrument_device_id  = instrument_device_id
        ret.instrument_device2_id = instrument_device2_id
        ret.platform_device_id    = platform_device_id
        ret.platform_deviceb_id    = platform_deviceb_id
        ret.instrument_model_id   = instrument_model_id
        ret.platform_model_id     = platform_model_id
        ret.deployment_id         = deployment_id

        return ret

    #@unittest.skip("targeting")
    def test_create_observatory(self):
        observatory_obj = IonObject(RT.Observatory,
                                        name='TestFacility',
                                        description='some new mf')
        observatory_id = self.OMS.create_observatory(observatory_obj)
        self.OMS.force_delete_observatory(observatory_id)

    #@unittest.skip("targeting")
    def _do_test_create_geospatial_point_center(self, resources):
        platformsite_obj = IonObject(RT.PlatformSite,
                                        name='TestPlatformSite',
                                        description='some new TestPlatformSite')
        geo_index_obj = IonObject(OT.GeospatialBounds)
        geo_index_obj.geospatial_latitude_limit_north = 20.0
        geo_index_obj.geospatial_latitude_limit_south = 10.0
        geo_index_obj.geospatial_longitude_limit_east = 15.0
        geo_index_obj.geospatial_longitude_limit_west = 20.0
        platformsite_obj.constraint_list = [geo_index_obj]

        platformsite_id = self.OMS.create_platform_site(platformsite_obj)

        # now get the dp back to see if it was updated
        platformsite_obj = self.OMS.read_platform_site(platformsite_id)
        self.assertEquals('some new TestPlatformSite', platformsite_obj.description)
        self.assertAlmostEqual(15.0, platformsite_obj.geospatial_point_center.lat, places=1)


        #now adjust a few params
        platformsite_obj.description = 'some old TestPlatformSite'
        geo_index_obj = IonObject(OT.GeospatialBounds)
        geo_index_obj.geospatial_latitude_limit_north = 30.0
        geo_index_obj.geospatial_latitude_limit_south = 20.0
        platformsite_obj.constraint_list = [geo_index_obj]
        update_result = self.OMS.update_platform_site(platformsite_obj)

        # now get the dp back to see if it was updated
        platformsite_obj = self.OMS.read_platform_site(platformsite_id)
        self.assertEquals('some old TestPlatformSite', platformsite_obj.description)
        self.assertAlmostEqual(25.0, platformsite_obj.geospatial_point_center.lat, places=1)

        self.OMS.force_delete_platform_site(platformsite_id)


    #@unittest.skip("targeting")
    def _do_test_find_observatory_org(self, resources):
        log.debug("Make TestOrg")
        org_obj = IonObject(RT.Org,
                            name='TestOrg',
                            description='some new mf org')

        org_id =  self.OMS.create_marine_facility(org_obj)

        log.debug("Make Observatory")
        observatory_obj = IonObject(RT.Observatory,
                                        name='TestObservatory',
                                        description='some new obs')
        observatory_id = self.OMS.create_observatory(observatory_obj)

        log.debug("assign observatory to org")
        self.OMS.assign_resource_to_observatory_org(observatory_id, org_id)


        log.debug("verify assigment")
        org_objs = self.OMS.find_org_by_observatory(observatory_id)
        self.assertEqual(1, len(org_objs))
        self.assertEqual(org_id, org_objs[0]._id)
        log.debug("org_id=<" + org_id + ">")

        log.debug("create a subsite with parent Observatory")
        subsite_obj =  IonObject(RT.Subsite,
                                name= 'TestSubsite',
                                description = 'sample subsite')
        subsite_id = self.OMS.create_subsite(subsite_obj, observatory_id)
        self.assertIsNotNone(subsite_id, "Subsite not created.")

        log.debug("verify that Subsite is linked to Observatory")
        mf_subsite_assoc = self.RR.get_association(observatory_id, PRED.hasSite, subsite_id)
        self.assertIsNotNone(mf_subsite_assoc, "Subsite not connected to Observatory.")


        log.debug("add the Subsite as a resource of this Observatory")
        self.OMS.assign_resource_to_observatory_org(resource_id=subsite_id, org_id=org_id)
        log.debug("verify that Subsite is linked to Org")
        org_subsite_assoc = self.RR.get_association(org_id, PRED.hasResource, subsite_id)
        self.assertIsNotNone(org_subsite_assoc, "Subsite not connected as resource to Org.")


        log.debug("create a logical platform with parent Subsite")
        platform_site_obj =  IonObject(RT.PlatformSite,
                                name= 'TestPlatformSite',
                                description = 'sample logical platform')
        platform_site_id = self.OMS.create_platform_site(platform_site_obj, subsite_id)
        self.assertIsNotNone(platform_site_id, "PlatformSite not created.")

        log.debug("verify that PlatformSite is linked to Site")
        site_lp_assoc = self.RR.get_association(subsite_id, PRED.hasSite, platform_site_id)
        self.assertIsNotNone(site_lp_assoc, "PlatformSite not connected to Site.")


        log.debug("add the PlatformSite as a resource of this Observatory")
        self.OMS.assign_resource_to_observatory_org(resource_id=platform_site_id, org_id=org_id)
        log.debug("verify that PlatformSite is linked to Org")
        org_lp_assoc = self.RR.get_association(org_id, PRED.hasResource, platform_site_id)
        self.assertIsNotNone(org_lp_assoc, "PlatformSite not connected as resource to Org.")



        log.debug("create a logical instrument with parent logical platform")
        instrument_site_obj =  IonObject(RT.InstrumentSite,
                                name= 'TestInstrumentSite',
                                description = 'sample logical instrument')
        instrument_site_id = self.OMS.create_instrument_site(instrument_site_obj, platform_site_id)
        self.assertIsNotNone(instrument_site_id, "InstrumentSite not created.")


        log.debug("verify that InstrumentSite is linked to PlatformSite")
        li_lp_assoc = self.RR.get_association(platform_site_id, PRED.hasSite, instrument_site_id)
        self.assertIsNotNone(li_lp_assoc, "InstrumentSite not connected to PlatformSite.")


        log.debug("add the InstrumentSite as a resource of this Observatory")
        self.OMS.assign_resource_to_observatory_org(resource_id=instrument_site_id, org_id=org_id)
        log.debug("verify that InstrumentSite is linked to Org")
        org_li_assoc = self.RR.get_association(org_id, PRED.hasResource, instrument_site_id)
        self.assertIsNotNone(org_li_assoc, "InstrumentSite not connected as resource to Org.")


        log.debug("remove the InstrumentSite as a resource of this Observatory")
        self.OMS.unassign_resource_from_observatory_org(instrument_site_id, org_id)
        log.debug("verify that InstrumentSite is linked to Org")
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.InstrumentSite, id_only=True )
        self.assertEqual(0, len(assocs))

        log.debug("remove the InstrumentSite, association should drop automatically")
        self.OMS.delete_instrument_site(instrument_site_id)
        assocs, _ = self.RR.find_objects(platform_site_id, PRED.hasSite, RT.InstrumentSite, id_only=True )
        self.assertEqual(0, len(assocs))


        log.debug("remove the PlatformSite as a resource of this Observatory")
        self.OMS.unassign_resource_from_observatory_org(platform_site_id, org_id)
        log.debug("verify that PlatformSite is linked to Org")
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.PlatformSite, id_only=True )
        self.assertEqual(0, len(assocs))


        log.debug("remove the Site as a resource of this Observatory")
        self.OMS.unassign_resource_from_observatory_org(subsite_id, org_id)
        log.debug("verify that Site is linked to Org")
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.Subsite, id_only=True )
        self.assertEqual(0, len(assocs))

        self.RR.delete(org_id)
        self.OMS.force_delete_observatory(observatory_id)
        self.OMS.force_delete_subsite(subsite_id)
        self.OMS.force_delete_platform_site(platform_site_id)
        self.OMS.force_delete_instrument_site(instrument_site_id)


    @attr('EXT')
    def test_observatory_extensions(self):



        obs_id = self.RR2.create(any_old(RT.Observatory))
        pss_id = self.RR2.create(any_old(RT.PlatformSite, dict(alt_resource_type="StationSite")))
        pas_id = self.RR2.create(any_old(RT.PlatformSite, dict(alt_resource_type="PlatformAssemblySite")))
        pcs_id = self.RR2.create(any_old(RT.PlatformSite, dict(alt_resource_type="PlatformComponentSite")))
        ins_id = self.RR2.create(any_old(RT.InstrumentSite))

        obs_obj = self.RR2.read(obs_id)
        pss_obj = self.RR2.read(pss_id)
        pas_obj = self.RR2.read(pas_id)
        pcs_obj = self.RR2.read(pcs_id)
        ins_obj = self.RR2.read(ins_id)

        self.RR2.create_association(obs_id, PRED.hasSite, pss_id)
        self.RR2.create_association(pss_id, PRED.hasSite, pas_id)
        self.RR2.create_association(pas_id, PRED.hasSite, pcs_id)
        self.RR2.create_association(pcs_id, PRED.hasSite, ins_id)

        extended_obs = self.OMS.get_observatory_site_extension(obs_id, user_id=12345)
        self.assertEqual([pss_obj], extended_obs.computed.platform_station_sites.value)
        self.assertEqual(ComputedValueAvailability.PROVIDED, extended_obs.computed.platform_station_sites.status)
        self.assertEqual([pas_obj], extended_obs.computed.platform_assembly_sites.value)
        self.assertEqual(ComputedValueAvailability.PROVIDED, extended_obs.computed.platform_assembly_sites.status)
        self.assertEqual([pcs_obj], extended_obs.computed.platform_component_sites.value)
        self.assertEqual(ComputedValueAvailability.PROVIDED, extended_obs.computed.platform_component_sites.status)
        self.assertEqual([ins_obj], extended_obs.computed.instrument_sites.value)

        extended_pss = self.OMS.get_observatory_site_extension(obs_id, user_id=12345)
        self.assertEqual([pas_obj], extended_pss.computed.platform_assembly_sites.value)
        self.assertEqual([pcs_obj], extended_pss.computed.platform_component_sites.value)
        self.assertEqual([ins_obj], extended_pss.computed.instrument_sites.value)

        extended_pas = self.OMS.get_observatory_site_extension(pas_id, user_id=12345)
        self.assertEqual([pcs_obj], extended_pas.computed.platform_component_sites.value)
        self.assertEqual([ins_obj], extended_pas.computed.instrument_sites.value)

        extended_pcs = self.OMS.get_platform_component_site_extension(pcs_id, user_id=12345)
        self.assertEqual([ins_obj], extended_pcs.computed.instrument_sites.value)


    #@unittest.skip("in development...")
    @attr('EXT')
    @attr('EXT1')
    def test_observatory_org_extended(self):

        stuff = self._make_associations()

        parsed_pdict_id = self.dataset_management.read_parameter_dictionary_by_name('ctd_parsed_param_dict',
                                                                                    id_only=True)

        parsed_stream_def_id = self.pubsubcli.create_stream_definition(name='parsed',
                                                                       parameter_dictionary_id=parsed_pdict_id)
        tdom, sdom = time_series_domain()
        sdom = sdom.dump()
        tdom = tdom.dump()
        dp_obj = IonObject(RT.DataProduct,
            name='the parsed data',
            description='ctd stream test',
            temporal_domain = tdom,
            spatial_domain = sdom)


        data_product_id1 = self.dpclient.create_data_product(data_product=dp_obj,
                                                             stream_definition_id=parsed_stream_def_id)
        self.damsclient.assign_data_product(input_resource_id=stuff.instrument_device_id,
                                            data_product_id=data_product_id1)


        #Create a  user to be used as regular member
        member_actor_obj = IonObject(RT.ActorIdentity, name='org member actor')
        member_actor_id,_ = self.RR.create(member_actor_obj)
        assert(member_actor_id)
        member_actor_header = get_actor_header(member_actor_id)


        member_user_obj = IonObject(RT.UserInfo, name='org member user')
        member_user_id,_ = self.RR.create(member_user_obj)
        assert(member_user_id)

        self.RR.create_association(subject=member_actor_id, predicate=PRED.hasInfo, object=member_user_id)


        #Build the Service Agreement Proposal to enroll a user actor
        sap = IonObject(OT.EnrollmentProposal,consumer=member_actor_id, provider=stuff.org_id )

        sap_response = self.org_management_service.negotiate(sap, headers=member_actor_header )

        #enroll the member without using negotiation
        self.org_management_service.enroll_member(org_id=stuff.org_id, actor_id=member_actor_id)

        #--------------------------------------------------------------------------------
        # Get the extended Site (platformSite)
        #--------------------------------------------------------------------------------


        try:
            extended_site = self.OMS.get_site_extension(stuff.platform_site_id)
        except:
            log.error('failed to get extended site', exc_info=True)
            raise
        log.debug("extended_site:  %r ", extended_site)
        self.assertEqual(1, len(extended_site.platform_devices))
        self.assertEqual(1, len(extended_site.platform_models))
        self.assertEqual(stuff.platform_device_id, extended_site.platform_devices[0]._id)
        self.assertEqual(stuff.platform_model_id, extended_site.platform_models[0]._id)

        log.debug("verify that PlatformDeviceb is linked to PlatformDevice with hasNetworkParent link")
        associations = self.RR.find_associations(subject=stuff.platform_deviceb_id, predicate=PRED.hasNetworkParent, object=stuff.platform_device_id, id_only=True)
        self.assertIsNotNone(associations, "PlatformDevice child not connected to PlatformDevice parent.")


        #--------------------------------------------------------------------------------
        # Get the extended Org
        #--------------------------------------------------------------------------------
        #test the extended resource
        extended_org = self.OMS.get_marine_facility_extension(stuff.org_id)
        log.debug("test_observatory_org_extended: extended_org:  %s ", str(extended_org))
        #self.assertEqual(2, len(extended_org.instruments_deployed) )
        #self.assertEqual(1, len(extended_org.platforms_not_deployed) )
        self.assertEqual(2, extended_org.number_of_platforms)
        self.assertEqual(2, len(extended_org.platform_models) )

        self.assertEqual(2, extended_org.number_of_instruments)
        self.assertEqual(2, len(extended_org.instrument_models) )

        self.assertEqual(1, len(extended_org.members))
        self.assertNotEqual(extended_org.members[0]._id, member_actor_id)
        self.assertEqual(extended_org.members[0]._id, member_user_id)

        self.assertEqual(1, len(extended_org.open_requests))

        self.assertTrue(len(extended_site.deployments)>0)
        self.assertEqual(len(extended_site.deployments), len(extended_site.deployment_info))

        #test the extended resource of the ION org
        ion_org_id = self.org_management_service.find_org()
        extended_org = self.OMS.get_marine_facility_extension(ion_org_id._id, user_id=12345)
        log.debug("test_observatory_org_extended: extended_ION_org:  %s ", str(extended_org))
        self.assertEqual(1, len(extended_org.members))
        self.assertEqual(0, extended_org.number_of_platforms)
        #self.assertEqual(1, len(extended_org.sites))


        #--------------------------------------------------------------------------------
        # Get the extended Site
        #--------------------------------------------------------------------------------

        #create device state events to use for op /non-op filtering in extended
        t = get_ion_ts()
        self.event_publisher.publish_event(  ts_created= t,  event_type = 'ResourceAgentStateEvent',
            origin = stuff.instrument_device_id, state=ResourceAgentState.STREAMING  )

        self.event_publisher.publish_event( ts_created= t,   event_type = 'ResourceAgentStateEvent',
            origin = stuff.instrument_device2_id, state=ResourceAgentState.INACTIVE )
        extended_site =  self.OMS.get_site_extension(stuff.instrument_site2_id)


        log.debug("test_observatory_org_extended: extended_site:  %s ", str(extended_site))

        self.dpclient.delete_data_product(data_product_id1)
class TestObservatoryManagementServiceIntegration(IonIntegrationTestCase):

    def setUp(self):
        # Start container
        #print 'instantiating container'
        self._start_container()
        #container = Container()
        #print 'starting container'
        #container.start()
        #print 'started container'

        self.container.start_rel_from_url('res/deploy/r2deploy.yml')
        self.RR = ResourceRegistryServiceClient(node=self.container.node)
        self.OMS = ObservatoryManagementServiceClient(node=self.container.node)
        self.org_management_service = OrgManagementServiceClient(node=self.container.node)
        self.IMS =  InstrumentManagementServiceClient(node=self.container.node)
        self.dpclient = DataProductManagementServiceClient(node=self.container.node)
        self.pubsubcli =  PubsubManagementServiceClient(node=self.container.node)
        self.damsclient = DataAcquisitionManagementServiceClient(node=self.container.node)
        self.dataset_management = DatasetManagementServiceClient()
        #print 'TestObservatoryManagementServiceIntegration: started services'

        self.event_publisher = EventPublisher()

#    @unittest.skip('this exists only for debugging the launch process')
#    def test_just_the_setup(self):
#        return


    def destroy(self, resource_ids):
        self.OMS.force_delete_observatory(resource_ids.observatory_id)
        self.OMS.force_delete_subsite(resource_ids.subsite_id)
        self.OMS.force_delete_subsite(resource_ids.subsite2_id)
        self.OMS.force_delete_subsite(resource_ids.subsiteb_id)
        self.OMS.force_delete_subsite(resource_ids.subsitez_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb2_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site2_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_siteb3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site4_id)

    #@unittest.skip('targeting')
    def test_resources_associations(self):
        resources = self._make_associations()
        self.destroy(resources)

    #@unittest.skip('targeting')
    def test_find_related_frames_of_reference(self):
        # finding subordinates gives a dict of obj lists, convert objs to ids
        def idify(adict):
            ids = {}
            for k, v in adict.iteritems():
                ids[k] = []
                for obj in v:
                    ids[k].append(obj._id)

            return ids

        # a short version of the function we're testing, with id-ify
        def short(resource_id, output_types):
            ret = self.OMS.find_related_frames_of_reference(resource_id,
                                                            output_types)
            return idify(ret)
            
            
        #set up associations first
        stuff = self._make_associations()
        #basic traversal of tree from instrument to platform
        ids = short(stuff.instrument_site_id, [RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])

        #since this is the first search, just make sure the input inst_id got stripped
        if RT.InstrumentSite in ids:
            self.assertNotIn(stuff.instrument_site_id, ids[RT.InstrumentSite])

        #basic traversal of tree from platform to instrument
        ids = short(stuff.platform_siteb_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])
        self.assertNotIn(stuff.instrument_site2_id, ids[RT.InstrumentSite])


        #full traversal of tree from observatory down to instrument
        ids = short(stuff.observatory_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])


        #full traversal of tree from instrument to observatory
        ids = short(stuff.instrument_site_id, [RT.Observatory])
        self.assertIn(RT.Observatory, ids)
        self.assertIn(stuff.observatory_id, ids[RT.Observatory])


        #partial traversal, only down to platform
        ids = short(stuff.observatory_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site3_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(RT.InstrumentSite, ids)


        #partial traversal, only down to platform
        ids = short(stuff.instrument_site_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertNotIn(RT.Observatory, ids)

        self.destroy(stuff)

    def _make_associations(self):
        """
        create one of each resource and association used by OMS
        to guard against problems in ion-definitions
        """

        #raise unittest.SkipTest("https://jira.oceanobservatories.org/tasks/browse/CISWCORE-41")
        

        """
        the tree we're creating (observatory, sites, platforms, instruments)

        rows are lettered, colums numbered.  
         - first row is implied a
         - first column is implied 1
         - site Z, just because 

        O--Sz
        |
        S--S2--P3--I4
        |
        Sb-Pb2-Ib3
        |
        P--I2 <- PlatformDevice, InstrumentDevice2
        |
        Pb <- PlatformDevice b
        |
        I <- InstrumentDevice

        """

        org_id = self.OMS.create_marine_facility(any_old(RT.Org))

        def create_under_org(resource_type):
            obj = any_old(resource_type)

            if RT.InstrumentDevice == resource_type:
                resource_id = self.IMS.create_instrument_device(obj)
            else:
                resource_id, _ = self.RR.create(obj)

            self.OMS.assign_resource_to_observatory_org(resource_id=resource_id, org_id=org_id)
            return resource_id

        #stuff we control
        observatory_id          = create_under_org(RT.Observatory)
        subsite_id              = create_under_org(RT.Subsite)
        subsite2_id             = create_under_org(RT.Subsite)
        subsiteb_id             = create_under_org(RT.Subsite)
        subsitez_id             = create_under_org(RT.Subsite)
        platform_site_id        = create_under_org(RT.PlatformSite)
        platform_siteb_id       = create_under_org(RT.PlatformSite)
        platform_siteb2_id      = create_under_org(RT.PlatformSite)
        platform_site3_id       = create_under_org(RT.PlatformSite)
        instrument_site_id      = create_under_org(RT.InstrumentSite)
        instrument_site2_id     = create_under_org(RT.InstrumentSite)
        instrument_siteb3_id    = create_under_org(RT.InstrumentSite)
        instrument_site4_id     = create_under_org(RT.InstrumentSite)

        #stuff we associate to
        instrument_device_id    = create_under_org(RT.InstrumentDevice)
        instrument_device2_id   = create_under_org(RT.InstrumentDevice)
        platform_device_id      = create_under_org(RT.PlatformDevice)
        platform_deviceb_id     = create_under_org(RT.PlatformDevice)
        instrument_model_id, _  = self.RR.create(any_old(RT.InstrumentModel))
        platform_model_id, _    = self.RR.create(any_old(RT.PlatformModel))
        deployment_id, _        = self.RR.create(any_old(RT.Deployment))

        #observatory
        self.RR.create_association(observatory_id, PRED.hasSite, subsite_id)
        self.RR.create_association(observatory_id, PRED.hasSite, subsitez_id)

        #site
        self.RR.create_association(subsite_id, PRED.hasSite, subsite2_id)
        self.RR.create_association(subsite_id, PRED.hasSite, subsiteb_id)
        self.RR.create_association(subsite2_id, PRED.hasSite, platform_site3_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite, platform_siteb2_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite, platform_site_id)
        
        #platform_site(s)
        self.RR.create_association(platform_site3_id, PRED.hasSite, instrument_site4_id)
        self.RR.create_association(platform_siteb2_id, PRED.hasSite, instrument_siteb3_id)
        self.RR.create_association(platform_site_id, PRED.hasSite, instrument_site2_id)
        self.RR.create_association(platform_site_id, PRED.hasSite, platform_siteb_id)
        self.RR.create_association(platform_siteb_id, PRED.hasSite, instrument_site_id)

        self.RR.create_association(platform_siteb_id, PRED.hasDevice, platform_deviceb_id)

        self.RR.create_association(platform_site_id, PRED.hasModel, platform_model_id)
        self.RR.create_association(platform_site_id, PRED.hasDevice, platform_device_id)
        self.RR.create_association(platform_site_id, PRED.hasDeployment, deployment_id)

        #instrument_site(s)
        self.RR.create_association(instrument_site_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_site_id, PRED.hasDevice, instrument_device_id)
        self.RR.create_association(instrument_site_id, PRED.hasDeployment, deployment_id)

        self.RR.create_association(instrument_site2_id, PRED.hasDevice, instrument_device2_id)

        #platform_device
        self.RR.create_association(platform_device_id, PRED.hasModel, platform_model_id)

        #instrument_device
        self.RR.create_association(instrument_device_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_device2_id, PRED.hasModel, instrument_model_id)

        ret = DotDict()
        ret.org_id                = org_id
        ret.observatory_id        = observatory_id
        ret.subsite_id            = subsite_id
        ret.subsite2_id           = subsite2_id
        ret.subsiteb_id           = subsiteb_id
        ret.subsitez_id           = subsitez_id
        ret.platform_site_id      = platform_site_id
        ret.platform_siteb_id     = platform_siteb_id
        ret.platform_siteb2_id    = platform_siteb2_id
        ret.platform_site3_id     = platform_site3_id
        ret.instrument_site_id    = instrument_site_id
        ret.instrument_site2_id   = instrument_site2_id
        ret.instrument_siteb3_id  = instrument_siteb3_id
        ret.instrument_site4_id   = instrument_site4_id

        ret.instrument_device_id  = instrument_device_id
        ret.instrument_device2_id = instrument_device2_id
        ret.platform_device_id    = platform_device_id
        ret.platform_deviceb_id    = platform_deviceb_id
        ret.instrument_model_id   = instrument_model_id
        ret.platform_model_id     = platform_model_id
        ret.deployment_id         = deployment_id

        return ret

    #@unittest.skip("targeting")
    def test_create_observatory(self):
        observatory_obj = IonObject(RT.Observatory,
                                        name='TestFacility',
                                        description='some new mf')
        observatory_id = self.OMS.create_observatory(observatory_obj)
        self.OMS.force_delete_observatory(observatory_id)


    #@unittest.skip("targeting")
    def test_find_observatory_org(self):
        org_obj = IonObject(RT.Org,
                            name='TestOrg',
                            description='some new mf org')

        org_id =  self.OMS.create_marine_facility(org_obj)

        observatory_obj = IonObject(RT.Observatory,
                                        name='TestObservatory',
                                        description='some new obs')
        observatory_id = self.OMS.create_observatory(observatory_obj)

        #make association
        
        self.OMS.assign_resource_to_observatory_org(observatory_id, org_id)


        #find association

        org_objs = self.OMS.find_org_by_observatory(observatory_id)
        self.assertEqual(1, len(org_objs))
        self.assertEqual(org_id, org_objs[0]._id)
        print("org_id=<" + org_id + ">")

        #create a subsite with parent Observatory
        subsite_obj =  IonObject(RT.Subsite,
                                name= 'TestSubsite',
                                description = 'sample subsite')
        subsite_id = self.OMS.create_subsite(subsite_obj, observatory_id)
        self.assertIsNotNone(subsite_id, "Subsite not created.")

        # verify that Subsite is linked to Observatory
        mf_subsite_assoc = self.RR.get_association(observatory_id, PRED.hasSite, subsite_id)
        self.assertIsNotNone(mf_subsite_assoc, "Subsite not connected to Observatory.")


        # add the Subsite as a resource of this Observatory
        self.OMS.assign_resource_to_observatory_org(resource_id=subsite_id, org_id=org_id)
        # verify that Subsite is linked to Org
        org_subsite_assoc = self.RR.get_association(org_id, PRED.hasResource, subsite_id)
        self.assertIsNotNone(org_subsite_assoc, "Subsite not connected as resource to Org.")


        #create a logical platform with parent Subsite
        platform_site_obj =  IonObject(RT.PlatformSite,
                                name= 'TestPlatformSite',
                                description = 'sample logical platform')
        platform_site_id = self.OMS.create_platform_site(platform_site_obj, subsite_id)
        self.assertIsNotNone(platform_site_id, "PlatformSite not created.")

        # verify that PlatformSite is linked to Site
        site_lp_assoc = self.RR.get_association(subsite_id, PRED.hasSite, platform_site_id)
        self.assertIsNotNone(site_lp_assoc, "PlatformSite not connected to Site.")


        # add the PlatformSite as a resource of this Observatory
        self.OMS.assign_resource_to_observatory_org(resource_id=platform_site_id, org_id=org_id)
        # verify that PlatformSite is linked to Org
        org_lp_assoc = self.RR.get_association(org_id, PRED.hasResource, platform_site_id)
        self.assertIsNotNone(org_lp_assoc, "PlatformSite not connected as resource to Org.")



        #create a logical instrument with parent logical platform
        instrument_site_obj =  IonObject(RT.InstrumentSite,
                                name= 'TestInstrumentSite',
                                description = 'sample logical instrument')
        instrument_site_id = self.OMS.create_instrument_site(instrument_site_obj, platform_site_id)
        self.assertIsNotNone(instrument_site_id, "InstrumentSite not created.")


        # verify that InstrumentSite is linked to PlatformSite
        li_lp_assoc = self.RR.get_association(platform_site_id, PRED.hasSite, instrument_site_id)
        self.assertIsNotNone(li_lp_assoc, "InstrumentSite not connected to PlatformSite.")


        # add the InstrumentSite as a resource of this Observatory
        self.OMS.assign_resource_to_observatory_org(resource_id=instrument_site_id, org_id=org_id)
        # verify that InstrumentSite is linked to Org
        org_li_assoc = self.RR.get_association(org_id, PRED.hasResource, instrument_site_id)
        self.assertIsNotNone(org_li_assoc, "InstrumentSite not connected as resource to Org.")


        # remove the InstrumentSite as a resource of this Observatory
        self.OMS.unassign_resource_from_observatory_org(instrument_site_id, org_id)
        # verify that InstrumentSite is linked to Org
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.InstrumentSite, id_only=True )
        self.assertEqual(len(assocs), 0)

        # remove the InstrumentSite
        self.OMS.delete_instrument_site(instrument_site_id)
        assocs, _ = self.RR.find_objects(platform_site_id, PRED.hasSite, RT.InstrumentSite, id_only=True )
        self.assertEqual(len(assocs), 1)
        #todo: remove the dangling association


        # remove the PlatformSite as a resource of this Observatory
        self.OMS.unassign_resource_from_observatory_org(platform_site_id, org_id)
        # verify that PlatformSite is linked to Org
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.PlatformSite, id_only=True )
        self.assertEqual(len(assocs), 0)


        # remove the Site as a resource of this Observatory
        self.OMS.unassign_resource_from_observatory_org(subsite_id, org_id)
        # verify that Site is linked to Org
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.Subsite, id_only=True )
        self.assertEqual(len(assocs), 0)

        self.RR.delete(org_id)
        self.OMS.force_delete_observatory(observatory_id)
        self.OMS.force_delete_subsite(subsite_id)
        self.OMS.force_delete_platform_site(platform_site_id)
        self.OMS.force_delete_instrument_site(instrument_site_id)


    #@unittest.skip("in development...")
    @attr('EXT')
    def test_observatory_org_extended(self):

        stuff = self._make_associations()

        parsed_pdict_id = self.dataset_management.read_parameter_dictionary_by_name('ctd_parsed_param_dict',
                                                                                    id_only=True)
        parsed_stream_def_id = self.pubsubcli.create_stream_definition(name='parsed',
                                                                       parameter_dictionary_id=parsed_pdict_id)
        tdom, sdom = time_series_domain()
        sdom = sdom.dump()
        tdom = tdom.dump()
        dp_obj = IonObject(RT.DataProduct,
            name='the parsed data',
            description='ctd stream test',
            temporal_domain = tdom,
            spatial_domain = sdom)

        data_product_id1 = self.dpclient.create_data_product(data_product=dp_obj,
                                                             stream_definition_id=parsed_stream_def_id)
        self.damsclient.assign_data_product(input_resource_id=stuff.instrument_device_id,
                                            data_product_id=data_product_id1)


        #--------------------------------------------------------------------------------
        # Get the extended Site (platformSite)
        #--------------------------------------------------------------------------------

        extended_site = self.OMS.get_site_extension(stuff.platform_site_id)
        log.debug("extended_site:  %s ", str(extended_site))
        self.assertEqual(1, len(extended_site.platform_devices))
        self.assertEqual(1, len(extended_site.platform_models))
        self.assertEqual(stuff.platform_device_id, extended_site.platform_devices[0]._id)
        self.assertEqual(stuff.platform_model_id, extended_site.platform_models[0]._id)

        #--------------------------------------------------------------------------------
        # Get the extended Org
        #--------------------------------------------------------------------------------
        #test the extended resource
        extended_org = self.org_management_service.get_marine_facility_extension(stuff.org_id)
        log.debug("test_observatory_org_extended: extended_org:  %s ", str(extended_org))
        #self.assertEqual(2, len(extended_org.instruments_deployed) )
        #self.assertEqual(1, len(extended_org.platforms_not_deployed) )
        self.assertEqual(2, extended_org.number_of_platforms)
        self.assertEqual(2, len(extended_org.platform_models) )

        self.assertEqual(2, extended_org.number_of_instruments)
        self.assertEqual(2, len(extended_org.instrument_models) )

        #test the extended resource of the ION org
        ion_org_id = self.org_management_service.find_org()
        extended_org = self.org_management_service.get_marine_facility_extension(ion_org_id._id)
        log.debug("test_observatory_org_extended: extended_ION_org:  %s ", str(extended_org))
        self.assertEqual(0, len(extended_org.members))
        self.assertEqual(0, extended_org.number_of_platforms)
        #self.assertEqual(1, len(extended_org.sites))



        #--------------------------------------------------------------------------------
        # Get the extended Site
        #--------------------------------------------------------------------------------

        #create device state events to use for op /non-op filtering in extended
        t = get_ion_ts()
        self.event_publisher.publish_event(  ts_created= t,  event_type = 'ResourceAgentStateEvent',
            origin = stuff.instrument_device_id, state=ResourceAgentState.STREAMING  )

        self.event_publisher.publish_event( ts_created= t,   event_type = 'ResourceAgentStateEvent',
            origin = stuff.instrument_device2_id, state=ResourceAgentState.INACTIVE )
        extended_site =  self.OMS.get_site_extension(stuff.instrument_site2_id)


        log.debug("test_observatory_org_extended: extended_site:  %s ", str(extended_site))

        self.dpclient.delete_data_product(data_product_id1)
class TestInstrumentManagementServiceIntegration(IonIntegrationTestCase):

    def setUp(self):
        # Start container
        #print 'instantiating container'
        self._start_container()
        #container = Container()
        #print 'starting container'
        #container.start()
        #print 'started container'
        unittest # suppress an pycharm inspector error if all unittest.skip references are commented out

        self.container.start_rel_from_url('res/deploy/r2deploy.yml')
        self.RR   = ResourceRegistryServiceClient(node=self.container.node)
        self.IMS  = InstrumentManagementServiceClient(node=self.container.node)
        self.IDS  = IdentityManagementServiceClient(node=self.container.node)
        self.PSC  = PubsubManagementServiceClient(node=self.container.node)
        self.DP   = DataProductManagementServiceClient(node=self.container.node)
        self.DAMS = DataAcquisitionManagementServiceClient(node=self.container.node)
        self.DSC  = DatasetManagementServiceClient(node=self.container.node)
        self.PDC  = ProcessDispatcherServiceClient(node=self.container.node)
        self.OMS = ObservatoryManagementServiceClient(node=self.container.node)
        self.RR2 = EnhancedResourceRegistryClient(self.RR)

#    @unittest.skip('this test just for debugging setup')
#    def test_just_the_setup(self):
#        return

    @attr('EXT')
    @unittest.skipIf(os.getenv('CEI_LAUNCH_TEST', False), 'Skip test while in CEI LAUNCH mode as it depends on modifying CFG on service side')
    def test_resources_associations_extensions(self):
        """
        create one of each resource and association used by IMS
        to guard against problems in ion-definitions
        """
        self.patch_cfg(CFG["container"], {"extended_resources": {"strip_results": False}})

        #stuff we control
        instrument_agent_instance_id, _ =  self.RR.create(any_old(RT.InstrumentAgentInstance))
        instrument_agent_id, _ =           self.RR.create(any_old(RT.InstrumentAgent))
        instrument_model_id, _ =           self.RR.create(any_old(RT.InstrumentModel))
        instrument_device_id, _ =          self.RR.create(any_old(RT.InstrumentDevice))
        instrument_site_id, _ =            self.RR.create(any_old(RT.InstrumentSite))
        platform_agent_instance_id, _ =    self.RR.create(any_old(RT.PlatformAgentInstance))
        platform_agent_id, _ =             self.RR.create(any_old(RT.PlatformAgent))
        platform_site_id, _ =              self.RR.create(any_old(RT.PlatformSite))
        platform_device_id, _ =            self.RR.create(any_old(RT.PlatformDevice))
        platform_model_id, _ =             self.RR.create(any_old(RT.PlatformModel))
        sensor_device_id, _ =              self.RR.create(any_old(RT.SensorDevice))
        sensor_model_id, _ =               self.RR.create(any_old(RT.SensorModel))

        #stuff we associate to
        data_producer_id, _      = self.RR.create(any_old(RT.DataProducer))
        org_id, _ =                self.RR.create(any_old(RT.Org))

        #instrument_agent_instance_id #is only a target
        
        #instrument_agent
        self.RR.create_association(instrument_agent_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_agent_instance_id, PRED.hasAgentDefinition, instrument_agent_id)

        #instrument_device
        self.RR.create_association(instrument_device_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_device_id, PRED.hasAgentInstance, instrument_agent_instance_id)
        self.RR.create_association(instrument_device_id, PRED.hasDataProducer, data_producer_id)
        self.RR.create_association(instrument_device_id, PRED.hasDevice, sensor_device_id)
        self.RR.create_association(org_id, PRED.hasResource, instrument_device_id)


        instrument_model_id #is only a target

        platform_agent_instance_id #is only a target
        
        #platform_agent
        self.RR.create_association(platform_agent_id, PRED.hasModel, platform_model_id)
        self.RR.create_association(platform_agent_instance_id, PRED.hasAgentDefinition, platform_agent_id)

        #platform_device
        self.RR.create_association(platform_device_id, PRED.hasModel, platform_model_id)
        self.RR.create_association(platform_device_id, PRED.hasAgentInstance, platform_agent_instance_id)
        self.RR.create_association(platform_device_id, PRED.hasDevice, instrument_device_id)

        self.RR.create_association(instrument_site_id, PRED.hasDevice, instrument_device_id)
        self.RR.create_association(platform_site_id, PRED.hasDevice, platform_device_id)
        self.RR.create_association(platform_site_id, PRED.hasSite, instrument_site_id)

        platform_model_id #is only a target

        #sensor_device
        self.RR.create_association(sensor_device_id, PRED.hasModel, sensor_model_id)
        self.RR.create_association(sensor_device_id, PRED.hasDevice, instrument_device_id)

        sensor_model_id #is only a target

        #create a parsed product for this instrument output
        dp_obj = IonObject(RT.DataProduct,
            name='the parsed data',
            description='ctd stream test',
            processing_level_code='Parsed_Canonical')
        pdict_id = self.DSC.read_parameter_dictionary_by_name('ctd_parsed_param_dict', id_only=True)
        parsed_stream_def_id = self.PSC.create_stream_definition(name='parsed', parameter_dictionary_id=pdict_id)
        data_product_id1 = self.DP.create_data_product(data_product=dp_obj, stream_definition_id=parsed_stream_def_id)
        log.debug( 'new dp_id = %s', data_product_id1)

        self.DAMS.assign_data_product(input_resource_id=instrument_device_id, data_product_id=data_product_id1)


        def addInstOwner(inst_id, subject):

            actor_identity_obj = any_old(RT.ActorIdentity, {"name": subject})
            user_id = self.IDS.create_actor_identity(actor_identity_obj)
            user_info_obj = any_old(RT.UserInfo)
            user_info_id = self.IDS.create_user_info(user_id, user_info_obj)

            self.RR.create_association(inst_id, PRED.hasOwner, user_id)


        #Testing multiple instrument owners
        addInstOwner(instrument_device_id, "/DC=org/DC=cilogon/C=US/O=ProtectNetwork/CN=Roger Unwin A254")
        addInstOwner(instrument_device_id, "/DC=org/DC=cilogon/C=US/O=ProtectNetwork/CN=Bob Cumbers A256")

        extended_instrument = self.IMS.get_instrument_device_extension(instrument_device_id)

        self.assertEqual(instrument_device_id, extended_instrument._id)
        self.assertEqual(len(extended_instrument.owners), 2)
        self.assertEqual(extended_instrument.instrument_model._id, instrument_model_id)

        # Lifecycle
        self.assertEquals(len(extended_instrument.lcstate_transitions), 6)
        self.assertEquals(set(extended_instrument.lcstate_transitions.keys()), set(['develop', 'deploy', 'retire', 'plan', 'integrate', 'delete']))
        self.assertEquals(len(extended_instrument.availability_transitions), 2)
        self.assertEquals(set(extended_instrument.availability_transitions.keys()), set(['enable', 'announce']))

        # Verify that computed attributes exist for the extended instrument
        self.assertIsInstance(extended_instrument.computed.last_data_received_datetime, ComputedFloatValue)
        self.assertIsInstance(extended_instrument.computed.uptime, ComputedStringValue)

        self.assertIsInstance(extended_instrument.computed.power_status_roll_up, ComputedIntValue)
        self.assertIsInstance(extended_instrument.computed.communications_status_roll_up, ComputedIntValue)
        self.assertIsInstance(extended_instrument.computed.data_status_roll_up, ComputedIntValue)
        self.assertIsInstance(extended_instrument.computed.location_status_roll_up, ComputedIntValue)

        log.debug("extended_instrument.computed: %s", extended_instrument.computed)

        #check model
        inst_model_obj = self.RR.read(instrument_model_id)
        self.assertEqual(inst_model_obj.name, extended_instrument.instrument_model.name)

        #check agent instance
        inst_agent_instance_obj = self.RR.read(instrument_agent_instance_id)
        self.assertEqual(inst_agent_instance_obj.name, extended_instrument.agent_instance.name)

        #check agent
        inst_agent_obj = self.RR.read(instrument_agent_id)
        #compound assoc return list of lists so check the first element
        self.assertEqual(inst_agent_obj.name, extended_instrument.instrument_agent.name)

        #check platform device
        plat_device_obj = self.RR.read(platform_device_id)
        self.assertEqual(plat_device_obj.name, extended_instrument.platform_device.name)

        extended_platform = self.IMS.get_platform_device_extension(platform_device_id)

        self.assertEqual(1, len(extended_platform.portals))
        self.assertEqual(1, len(extended_platform.portal_instruments))
        #self.assertEqual(1, len(extended_platform.computed.portal_status.value)) # no agent started so NO statuses reported
        self.assertEqual(1, len(extended_platform.instrument_devices))
        self.assertEqual(instrument_device_id, extended_platform.instrument_devices[0]._id)
        self.assertEqual(1, len(extended_platform.instrument_models))
        self.assertEqual(instrument_model_id, extended_platform.instrument_models[0]._id)
        self.assertEquals(extended_platform.platform_agent._id, platform_agent_id)

        self.assertEquals(len(extended_platform.lcstate_transitions), 6)
        self.assertEquals(set(extended_platform.lcstate_transitions.keys()), set(['develop', 'deploy', 'retire', 'plan', 'integrate', 'delete']))
        self.assertEquals(len(extended_platform.availability_transitions), 2)
        self.assertEquals(set(extended_platform.availability_transitions.keys()), set(['enable', 'announce']))

        #check sensor devices
        self.assertEqual(1, len(extended_instrument.sensor_devices))

        ##check data_product_parameters_set
        # !!!  OOIION-1342 The UI does not use data_product_parameters_set and it is an expensive calc so the attribute calc was disabled
        # !!!   Remove check in this test
        #self.assertEqual(ComputedValueAvailability.PROVIDED,
        #                 extended_instrument.computed.data_product_parameters_set.status)
        #self.assertTrue( 'Parsed_Canonical' in extended_instrument.computed.data_product_parameters_set.value)
        ## the ctd parameters should include 'temp'
        #self.assertTrue( 'temp' in extended_instrument.computed.data_product_parameters_set.value['Parsed_Canonical'])

        #none of these will work because there is no agent
#        self.assertEqual(ComputedValueAvailability.NOTAVAILABLE,
#                         extended_instrument.computed.firmware_version.status)
#        self.assertEqual(ComputedValueAvailability.NOTAVAILABLE,
#                         extended_instrument.computed.operational_state.status)
#        self.assertEqual(ComputedValueAvailability.PROVIDED,
#                         extended_instrument.computed.power_status_roll_up.status)
#        self.assertEqual(ComputedValueAvailability.PROVIDED,
#                         extended_instrument.computed.communications_status_roll_up.status)
#        self.assertEqual(ComputedValueAvailability.PROVIDED,
#                         extended_instrument.computed.data_status_roll_up.status)
#        self.assertEqual(DeviceStatusType.STATUS_OK,
#                        extended_instrument.computed.data_status_roll_up.value)
#        self.assertEqual(ComputedValueAvailability.PROVIDED,
#                         extended_instrument.computed.location_status_roll_up.status)

#        self.assertEqual(ComputedValueAvailability.PROVIDED,
#                         extended_instrument.computed.recent_events.status)
#        self.assertEqual([], extended_instrument.computed.recent_events.value)


        # cleanup
        c = DotDict()
        c.resource_registry = self.RR
        self.RR2.pluck(instrument_agent_id)
        self.RR2.pluck(instrument_model_id)
        self.RR2.pluck(instrument_device_id)
        self.RR2.pluck(platform_agent_id)
        self.RR2.pluck(sensor_device_id)
        self.IMS.force_delete_instrument_agent(instrument_agent_id)
        self.IMS.force_delete_instrument_model(instrument_model_id)
        self.IMS.force_delete_instrument_device(instrument_device_id)
        self.IMS.force_delete_platform_agent_instance(platform_agent_instance_id)
        self.IMS.force_delete_platform_agent(platform_agent_id)
        self.OMS.force_delete_instrument_site(instrument_site_id)
        self.OMS.force_delete_platform_site(platform_site_id)
        self.IMS.force_delete_platform_device(platform_device_id)
        self.IMS.force_delete_platform_model(platform_model_id)
        self.IMS.force_delete_sensor_device(sensor_device_id)
        self.IMS.force_delete_sensor_model(sensor_model_id)

        #stuff we associate to
        self.RR.delete(data_producer_id)
        self.RR.delete(org_id)



    def test_custom_attributes(self):
        """
        Test assignment of custom attributes
        """

        instModel_obj = IonObject(OT.CustomAttribute,
                                  name='SBE37IMModelAttr',
                                  description="model custom attr")

        instrument_model_id, _ =           self.RR.create(any_old(RT.InstrumentModel,
                {"custom_attributes":
                         [instModel_obj]
            }))
        instrument_device_id, _ =          self.RR.create(any_old(RT.InstrumentDevice,
                {"custom_attributes":
                         {"favorite_color": "red",
                          "bogus_attr": "should raise warning"
                     }
            }))

        self.IMS.assign_instrument_model_to_instrument_device(instrument_model_id, instrument_device_id)

        # cleanup
        self.IMS.force_delete_instrument_device(instrument_device_id)
        self.IMS.force_delete_instrument_model(instrument_model_id)






    def _get_datastore(self, dataset_id):
        dataset = self.DSC.read_dataset(dataset_id)
        datastore_name = dataset.datastore_name
        datastore = self.container.datastore_manager.get_datastore(datastore_name, DataStore.DS_PROFILE.SCIDATA)
        return datastore



    def test_data_producer(self):
        idevice_id = self.IMS.create_instrument_device(any_old(RT.InstrumentDevice))
        self.assertEqual(1, len(self.RR2.find_data_producer_ids_of_instrument_device_using_has_data_producer(idevice_id)))

        pdevice_id = self.IMS.create_platform_device(any_old(RT.PlatformDevice))
        self.assertEqual(1, len(self.RR2.find_data_producer_ids_of_platform_device_using_has_data_producer(pdevice_id)))


    @attr('PREP')
    def test_prepare_resource_support(self):
        """
        create one of each resource and association used by IMS
        to guard against problems in ion-definitions
        """

        #stuff we control
        instrument_agent_instance_id, _ =  self.RR.create(any_old(RT.InstrumentAgentInstance))
        instrument_agent_id, _ =           self.RR.create(any_old(RT.InstrumentAgent))
        instrument_model_id, _ =           self.RR.create(any_old(RT.InstrumentModel))
        instrument_device_id, _ =          self.RR.create(any_old(RT.InstrumentDevice))
        platform_agent_instance_id, _ =    self.RR.create(any_old(RT.PlatformAgentInstance))
        platform_agent_id, _ =             self.RR.create(any_old(RT.PlatformAgent))
        platform_device_id, _ =            self.RR.create(any_old(RT.PlatformDevice))
        platform_model_id, _ =             self.RR.create(any_old(RT.PlatformModel))
        sensor_device_id, _ =              self.RR.create(any_old(RT.SensorDevice))
        sensor_model_id, _ =               self.RR.create(any_old(RT.SensorModel))

        instrument_device2_id, _ =          self.RR.create(any_old(RT.InstrumentDevice))
        instrument_device3_id, _ =          self.RR.create(any_old(RT.InstrumentDevice))

        platform_device2_id, _ =            self.RR.create(any_old(RT.PlatformDevice))
        sensor_device2_id, _ =              self.RR.create(any_old(RT.SensorDevice))

        #stuff we associate to
        data_producer_id, _      = self.RR.create(any_old(RT.DataProducer))
        org_id, _ =                self.RR.create(any_old(RT.Org))

        #instrument_agent_instance_id #is only a target

        #instrument_agent
        self.RR.create_association(instrument_agent_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_agent_instance_id, PRED.hasAgentDefinition, instrument_agent_id)

        #instrument_device
        self.RR.create_association(instrument_device_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_device_id, PRED.hasAgentInstance, instrument_agent_instance_id)
        self.RR.create_association(instrument_device_id, PRED.hasDataProducer, data_producer_id)
        self.RR.create_association(instrument_device_id, PRED.hasDevice, sensor_device_id)
        self.RR.create_association(org_id, PRED.hasResource, instrument_device_id)

        self.RR.create_association(instrument_device2_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(org_id, PRED.hasResource, instrument_device2_id)


        instrument_model_id #is only a target

        platform_agent_instance_id #is only a target

        #platform_agent
        self.RR.create_association(platform_agent_id, PRED.hasModel, platform_model_id)
        self.RR.create_association(platform_agent_instance_id, PRED.hasAgentDefinition, platform_agent_id)

        #platform_device
        self.RR.create_association(platform_device_id, PRED.hasModel, platform_model_id)
        self.RR.create_association(platform_device_id, PRED.hasAgentInstance, platform_agent_instance_id)
        self.RR.create_association(platform_device_id, PRED.hasDevice, instrument_device_id)

        self.RR.create_association(platform_device2_id, PRED.hasModel, platform_model_id)
        self.RR.create_association(platform_device2_id, PRED.hasDevice, instrument_device2_id)

        platform_model_id #is only a target

        #sensor_device
        self.RR.create_association(sensor_device_id, PRED.hasModel, sensor_model_id)
        self.RR.create_association(sensor_device_id, PRED.hasDevice, instrument_device_id)

        self.RR.create_association(sensor_device2_id, PRED.hasModel, sensor_model_id)
        self.RR.create_association(sensor_device2_id, PRED.hasDevice, instrument_device2_id)

        sensor_model_id #is only a target

        #set lcstate - used for testing prepare - not setting all to DEVELOP, only some
        self.RR.execute_lifecycle_transition(instrument_agent_id, LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(instrument_device_id, LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(instrument_device2_id, LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(platform_device_id, LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(platform_device2_id, LCE.DEVELOP)
        self.RR.execute_lifecycle_transition(platform_agent_id, LCE.DEVELOP)



        #create a parsed product for this instrument output
        dp_obj = IonObject(RT.DataProduct,
            name='the parsed data',
            description='ctd stream test',
            processing_level_code='Parsed_Canonical')
        pdict_id = self.DSC.read_parameter_dictionary_by_name('ctd_parsed_param_dict', id_only=True)
        parsed_stream_def_id = self.PSC.create_stream_definition(name='parsed', parameter_dictionary_id=pdict_id)
        data_product_id1 = self.DP.create_data_product(data_product=dp_obj, stream_definition_id=parsed_stream_def_id)
        log.debug( 'new dp_id = %s', data_product_id1)

        self.DAMS.assign_data_product(input_resource_id=instrument_device_id, data_product_id=data_product_id1)


        def addInstOwner(inst_id, subject):

            actor_identity_obj = any_old(RT.ActorIdentity, {"name": subject})
            user_id = self.IDS.create_actor_identity(actor_identity_obj)
            user_info_obj = any_old(RT.UserInfo)
            user_info_id = self.IDS.create_user_info(user_id, user_info_obj)

            self.RR.create_association(inst_id, PRED.hasOwner, user_id)


        #Testing multiple instrument owners
        addInstOwner(instrument_device_id, "/DC=org/DC=cilogon/C=US/O=ProtectNetwork/CN=Roger Unwin A254")
        addInstOwner(instrument_device_id, "/DC=org/DC=cilogon/C=US/O=ProtectNetwork/CN=Bob Cumbers A256")

        def ion_object_encoder(obj):
            return obj.__dict__


        #First call to create
        instrument_data = self.IMS.prepare_instrument_device_support()

        #print simplejson.dumps(instrument_data, default=ion_object_encoder, indent=2)


        self.assertEqual(instrument_data._id, '')
        self.assertEqual(instrument_data.type_, OT.InstrumentDevicePrepareSupport)
        self.assertEqual(len(instrument_data.associations['InstrumentModel'].resources), 1)
        self.assertEqual(instrument_data.associations['InstrumentModel'].resources[0]._id, instrument_model_id)
        self.assertEqual(len(instrument_data.associations['InstrumentAgentInstance'].resources), 1)
        self.assertEqual(instrument_data.associations['InstrumentAgentInstance'].resources[0]._id, instrument_agent_instance_id)
        self.assertEqual(len(instrument_data.associations['InstrumentModel'].associated_resources), 0)
        self.assertEqual(len(instrument_data.associations['InstrumentAgentInstance'].associated_resources), 0)
        self.assertEqual(len(instrument_data.associations['SensorDevice'].resources), 0)



        #Next call to update
        instrument_data = self.IMS.prepare_instrument_device_support(instrument_device_id)

        #print 'Update results'
        #print simplejson.dumps(instrument_data, default=ion_object_encoder, indent=2)

        self.assertEqual(instrument_data._id, instrument_device_id)
        self.assertEqual(instrument_data.type_, OT.InstrumentDevicePrepareSupport)
        self.assertEqual(len(instrument_data.associations['InstrumentModel'].resources), 1)
        self.assertEqual(instrument_data.associations['InstrumentModel'].resources[0]._id, instrument_model_id)
        self.assertEqual(len(instrument_data.associations['InstrumentAgentInstance'].resources), 1)
        self.assertEqual(instrument_data.associations['InstrumentAgentInstance'].resources[0]._id, instrument_agent_instance_id)
        self.assertEqual(len(instrument_data.associations['InstrumentModel'].associated_resources), 1)
        self.assertEqual(instrument_data.associations['InstrumentModel'].associated_resources[0].s, instrument_device_id)
        self.assertEqual(instrument_data.associations['InstrumentModel'].associated_resources[0].o, instrument_model_id)
        self.assertEqual(len(instrument_data.associations['InstrumentAgentInstance'].associated_resources), 1)
        self.assertEqual(instrument_data.associations['InstrumentAgentInstance'].associated_resources[0].o, instrument_agent_instance_id)
        self.assertEqual(instrument_data.associations['InstrumentAgentInstance'].associated_resources[0].s, instrument_device_id)
        self.assertEqual(len(instrument_data.associations['SensorDevice'].resources), 1)
        self.assertEqual(instrument_data.associations['SensorDevice'].resources[0]._id, sensor_device_id)
        self.assertEqual(len(instrument_data.associations['SensorDevice'].associated_resources), 1)
        self.assertEqual(instrument_data.associations['SensorDevice'].associated_resources[0].o, instrument_device_id)
        self.assertEqual(instrument_data.associations['SensorDevice'].associated_resources[0].s, sensor_device_id)
        self.assertEqual(instrument_data.associations['InstrumentModel'].assign_request.request_parameters['instrument_device_id'], instrument_device_id)


        #test prepare for create of instrument agent instance
        instrument_agent_data = self.IMS.prepare_instrument_agent_instance_support()

        #print 'Update results'
        #print simplejson.dumps(instrument_agent_data, default=ion_object_encoder, indent=2)

        self.assertEqual(instrument_agent_data._id, '')
        self.assertEqual(instrument_agent_data.type_, OT.InstrumentAgentInstancePrepareSupport)
        self.assertEqual(len(instrument_agent_data.associations['InstrumentDevice'].resources), 2)
        self.assertEqual(len(instrument_agent_data.associations['InstrumentAgent'].resources), 1)
        self.assertEqual(instrument_agent_data.associations['InstrumentAgent'].resources[0]._id, instrument_agent_id)
        self.assertEqual(len(instrument_agent_data.associations['InstrumentDevice'].associated_resources), 0)
        self.assertEqual(len(instrument_agent_data.associations['InstrumentAgent'].associated_resources), 0)


        #test prepare for update of instrument agent instance to see if it is associated with the instrument that was created
        instrument_agent_data = self.IMS.prepare_instrument_agent_instance_support(instrument_agent_instance_id=instrument_agent_instance_id)

        #print 'Update results'
        #print simplejson.dumps(instrument_agent_data, default=ion_object_encoder, indent=2)

        self.assertEqual(instrument_agent_data._id, instrument_agent_instance_id)
        self.assertEqual(instrument_agent_data.type_, OT.InstrumentAgentInstancePrepareSupport)
        self.assertEqual(len(instrument_agent_data.associations['InstrumentDevice'].resources), 3)
        self.assertEqual(len(instrument_agent_data.associations['InstrumentAgent'].resources), 1)
        self.assertEqual(instrument_agent_data.associations['InstrumentAgent'].resources[0]._id, instrument_agent_id)
        self.assertEqual(len(instrument_agent_data.associations['InstrumentDevice'].associated_resources), 1)
        self.assertEqual(instrument_agent_data.associations['InstrumentDevice'].associated_resources[0].s, instrument_device_id)
        self.assertEqual(instrument_agent_data.associations['InstrumentDevice'].associated_resources[0].o, instrument_agent_instance_id)
        self.assertEqual(len(instrument_agent_data.associations['InstrumentAgent'].associated_resources), 1)
        self.assertEqual(instrument_agent_data.associations['InstrumentAgent'].associated_resources[0].o, instrument_agent_id)
        self.assertEqual(instrument_agent_data.associations['InstrumentAgent'].associated_resources[0].s, instrument_agent_instance_id)
        self.assertEqual(instrument_agent_data.associations['InstrumentAgent'].assign_request.request_parameters['instrument_agent_instance_id'], instrument_agent_instance_id)


        #test prepare for update of data product to see if it is associated with the instrument that was created
        data_product_data = self.DP.prepare_data_product_support(data_product_id1)

        #print simplejson.dumps(data_product_data, default=ion_object_encoder, indent=2)

        self.assertEqual(data_product_data._id, data_product_id1)
        self.assertEqual(data_product_data.type_, OT.DataProductPrepareSupport)
        self.assertEqual(len(data_product_data.associations['StreamDefinition'].resources), 1)

        self.assertEqual(len(data_product_data.associations['Dataset'].resources), 0)

        self.assertEqual(len(data_product_data.associations['StreamDefinition'].associated_resources), 1)
        self.assertEqual(data_product_data.associations['StreamDefinition'].associated_resources[0].s, data_product_id1)

        self.assertEqual(len(data_product_data.associations['Dataset'].associated_resources), 0)

        self.assertEqual(len(data_product_data.associations['InstrumentDeviceHasOutputProduct'].resources), 3)

        self.assertEqual(len(data_product_data.associations['InstrumentDeviceHasOutputProduct'].associated_resources), 1)
        self.assertEqual(data_product_data.associations['InstrumentDeviceHasOutputProduct'].associated_resources[0].s, instrument_device_id)
        self.assertEqual(data_product_data.associations['InstrumentDeviceHasOutputProduct'].associated_resources[0].o, data_product_id1)

        self.assertEqual(len(data_product_data.associations['PlatformDevice'].resources), 2)


        platform_data = self.IMS.prepare_platform_device_support()

        #print simplejson.dumps(platform_data, default=ion_object_encoder, indent=2)

        self.assertEqual(platform_data._id, '')
        self.assertEqual(platform_data.type_, OT.PlatformDevicePrepareSupport)
        self.assertEqual(len(platform_data.associations['PlatformModel'].resources), 1)
        self.assertEqual(platform_data.associations['PlatformModel'].resources[0]._id, platform_model_id)
        self.assertEqual(len(platform_data.associations['PlatformAgentInstance'].resources), 1)
        self.assertEqual(platform_data.associations['PlatformAgentInstance'].resources[0]._id, platform_agent_instance_id)
        self.assertEqual(len(platform_data.associations['PlatformModel'].associated_resources), 0)
        self.assertEqual(len(platform_data.associations['PlatformAgentInstance'].associated_resources), 0)
        self.assertEqual(len(platform_data.associations['InstrumentDevice'].resources), 1)

        platform_data = self.IMS.prepare_platform_device_support(platform_device_id)

        #print simplejson.dumps(platform_data, default=ion_object_encoder, indent=2)

        self.assertEqual(platform_data._id, platform_device_id)
        self.assertEqual(platform_data.type_, OT.PlatformDevicePrepareSupport)
        self.assertEqual(len(platform_data.associations['PlatformModel'].resources), 1)
        self.assertEqual(platform_data.associations['PlatformModel'].resources[0]._id, platform_model_id)
        self.assertEqual(len(platform_data.associations['PlatformAgentInstance'].resources), 1)
        self.assertEqual(platform_data.associations['PlatformAgentInstance'].resources[0]._id, platform_agent_instance_id)
        self.assertEqual(len(platform_data.associations['PlatformModel'].associated_resources), 1)
        self.assertEqual(platform_data.associations['PlatformModel'].associated_resources[0].s, platform_device_id)
        self.assertEqual(platform_data.associations['PlatformModel'].associated_resources[0].o, platform_model_id)
        self.assertEqual(len(platform_data.associations['PlatformAgentInstance'].associated_resources), 1)
        self.assertEqual(platform_data.associations['PlatformAgentInstance'].associated_resources[0].o, platform_agent_instance_id)
        self.assertEqual(platform_data.associations['PlatformAgentInstance'].associated_resources[0].s, platform_device_id)
        self.assertEqual(len(platform_data.associations['InstrumentDevice'].resources), 2)
        #self.assertEqual(len(platform_data.associations['InstrumentDevice'].associated_resources), 1)
        #self.assertEqual(platform_data.associations['InstrumentDevice'].associated_resources[0].s, platform_device_id)
        #self.assertEqual(platform_data.associations['InstrumentDevice'].associated_resources[0].o, instrument_device_id)
        self.assertEqual(platform_data.associations['PlatformModel'].assign_request.request_parameters['platform_device_id'], platform_device_id)


        # cleanup
        c = DotDict()
        c.resource_registry = self.RR
        self.RR2.pluck(instrument_agent_id)
        self.RR2.pluck(instrument_model_id)
        self.RR2.pluck(instrument_device_id)
        self.RR2.pluck(platform_agent_id)
        self.RR2.pluck(sensor_device_id)
        self.RR2.pluck(sensor_device2_id)
        self.IMS.force_delete_instrument_agent(instrument_agent_id)
        self.IMS.force_delete_instrument_model(instrument_model_id)
        self.IMS.force_delete_instrument_device(instrument_device_id)
        self.IMS.force_delete_instrument_device(instrument_device2_id)
        self.IMS.force_delete_platform_agent_instance(platform_agent_instance_id)
        self.IMS.force_delete_platform_agent(platform_agent_id)
        self.IMS.force_delete_platform_device(platform_device_id)
        self.IMS.force_delete_platform_device(platform_device2_id)
        self.IMS.force_delete_platform_model(platform_model_id)
        self.IMS.force_delete_sensor_device(sensor_device_id)
        self.IMS.force_delete_sensor_device(sensor_device2_id)
        self.IMS.force_delete_sensor_model(sensor_model_id)

        #stuff we associate to
        self.RR.delete(data_producer_id)
        self.RR.delete(org_id)
示例#5
0
class TestObservatoryManagementServiceIntegration(IonIntegrationTestCase):
    def setUp(self):
        # Start container
        #print 'instantiating container'
        self._start_container()
        #container = Container()
        #print 'starting container'
        #container.start()
        #print 'started container'

        self.container.start_rel_from_url('res/deploy/r2deploy.yml')
        self.RR = ResourceRegistryServiceClient(node=self.container.node)
        self.RR2 = EnhancedResourceRegistryClient(self.RR)
        self.OMS = ObservatoryManagementServiceClient(node=self.container.node)
        self.org_management_service = OrgManagementServiceClient(
            node=self.container.node)
        self.IMS = InstrumentManagementServiceClient(node=self.container.node)
        self.dpclient = DataProductManagementServiceClient(
            node=self.container.node)
        self.pubsubcli = PubsubManagementServiceClient(
            node=self.container.node)
        self.damsclient = DataAcquisitionManagementServiceClient(
            node=self.container.node)
        self.dataset_management = DatasetManagementServiceClient()
        #print 'TestObservatoryManagementServiceIntegration: started services'

        self.event_publisher = EventPublisher()

#    @unittest.skip('this exists only for debugging the launch process')
#    def test_just_the_setup(self):
#        return

    def destroy(self, resource_ids):
        self.OMS.force_delete_observatory(resource_ids.observatory_id)
        self.OMS.force_delete_subsite(resource_ids.subsite_id)
        self.OMS.force_delete_subsite(resource_ids.subsite2_id)
        self.OMS.force_delete_subsite(resource_ids.subsiteb_id)
        self.OMS.force_delete_subsite(resource_ids.subsitez_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb2_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site2_id)
        self.OMS.force_delete_instrument_site(
            resource_ids.instrument_siteb3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site4_id)

    #@unittest.skip('targeting')
    def test_observatory_management(self):
        resources = self._make_associations()

        self._do_test_find_related_sites(resources)

        self._do_test_get_sites_devices_status(resources)

        self._do_test_find_site_data_products(resources)

        self._do_test_find_related_frames_of_reference(resources)

        self._do_test_create_geospatial_point_center(resources)

        self._do_test_find_observatory_org(resources)

        self.destroy(resources)

    def _do_test_find_related_sites(self, resources):

        site_resources, site_children, _, _ = self.OMS.find_related_sites(
            resources.org_id)

        #import sys, pprint
        #print >> sys.stderr, pprint.pformat(site_resources)
        #print >> sys.stderr, pprint.pformat(site_children)

        #self.assertIn(resources.org_id, site_resources)
        self.assertIn(resources.observatory_id, site_resources)
        self.assertIn(resources.subsite_id, site_resources)
        self.assertIn(resources.subsite_id, site_resources)
        self.assertIn(resources.subsite2_id, site_resources)
        self.assertIn(resources.platform_site_id, site_resources)
        self.assertIn(resources.instrument_site_id, site_resources)
        self.assertEquals(len(site_resources), 13)

        self.assertEquals(site_resources[resources.observatory_id].type_,
                          RT.Observatory)

        self.assertIn(resources.org_id, site_children)
        self.assertIn(resources.observatory_id, site_children)
        self.assertIn(resources.subsite_id, site_children)
        self.assertIn(resources.subsite_id, site_children)
        self.assertIn(resources.subsite2_id, site_children)
        self.assertIn(resources.platform_site_id, site_children)
        self.assertNotIn(resources.instrument_site_id, site_children)
        self.assertEquals(len(site_children), 9)

        self.assertIsInstance(site_children[resources.subsite_id], list)
        self.assertEquals(len(site_children[resources.subsite_id]), 2)

    def _do_test_get_sites_devices_status(self, resources):
        #bin/nosetests -s -v --nologcapture ion/services/sa/observatory/test/test_observatory_management_service_integration.py:TestObservatoryManagementServiceIntegration.test_observatory_management

        full_result_dict = self.OMS.get_sites_devices_status(
            parent_resource_ids=[resources.org_id], include_sites=True)

        result_dict = full_result_dict[resources.org_id]

        site_resources = result_dict.get("site_resources", None)
        site_children = result_dict.get("site_children", None)

        self.assertEquals(len(site_resources), 14)
        self.assertEquals(len(site_children), 9)

        full_result_dict = self.OMS.get_sites_devices_status(
            parent_resource_ids=[resources.org_id],
            include_sites=True,
            include_devices=True,
            include_status=True)

        result_dict = full_result_dict[resources.org_id]

        log.debug("RESULT DICT: %s", result_dict.keys())
        site_resources = result_dict.get("site_resources", None)
        site_children = result_dict.get("site_children", None)
        site_status = result_dict.get("site_status", None)

        self.assertEquals(len(site_resources), 14)
        self.assertEquals(len(site_children), 9)

        full_result_dict = self.OMS.get_sites_devices_status(
            parent_resource_ids=[resources.observatory_id],
            include_sites=True,
            include_devices=True,
            include_status=True)

        result_dict = full_result_dict[resources.observatory_id]

        site_resources = result_dict.get("site_resources")
        site_children = result_dict.get("site_children")
        site_status = result_dict.get("site_status")

        self.assertEquals(len(site_resources), 13)
        self.assertEquals(len(site_children), 8)

    def _do_test_find_site_data_products(self, resources):
        res_dict = self.OMS.find_site_data_products(resources.org_id)

        #import sys, pprint
        #print >> sys.stderr, pprint.pformat(res_dict)

        self.assertIsNone(res_dict['data_product_resources'])
        self.assertIn(resources.platform_device_id,
                      res_dict['device_data_products'])
        self.assertIn(resources.instrument_device_id,
                      res_dict['device_data_products'])

    #@unittest.skip('targeting')
    def _do_test_find_related_frames_of_reference(self, stuff):
        # finding subordinates gives a dict of obj lists, convert objs to ids
        def idify(adict):
            ids = {}
            for k, v in adict.iteritems():
                ids[k] = []
                for obj in v:
                    ids[k].append(obj._id)

            return ids

        # a short version of the function we're testing, with id-ify
        def short(resource_id, output_types):
            ret = self.OMS.find_related_frames_of_reference(
                resource_id, output_types)
            return idify(ret)

        #set up associations first
        stuff = self._make_associations()
        #basic traversal of tree from instrument to platform
        ids = short(stuff.instrument_site_id, [RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])

        #since this is the first search, just make sure the input inst_id got stripped
        if RT.InstrumentSite in ids:
            self.assertNotIn(stuff.instrument_site_id, ids[RT.InstrumentSite])

        #basic traversal of tree from platform to instrument
        ids = short(stuff.platform_siteb_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])
        self.assertNotIn(stuff.instrument_site2_id, ids[RT.InstrumentSite])

        #full traversal of tree from observatory down to instrument
        ids = short(stuff.observatory_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])

        #full traversal of tree from instrument to observatory
        ids = short(stuff.instrument_site_id, [RT.Observatory])
        self.assertIn(RT.Observatory, ids)
        self.assertIn(stuff.observatory_id, ids[RT.Observatory])

        #partial traversal, only down to platform
        ids = short(stuff.observatory_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site3_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(RT.InstrumentSite, ids)

        #partial traversal, only down to platform
        ids = short(stuff.instrument_site_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertNotIn(RT.Observatory, ids)

        self.destroy(stuff)

    def _make_associations(self):
        """
        create one of each resource and association used by OMS
        to guard against problems in ion-definitions
        """

        #raise unittest.SkipTest("https://jira.oceanobservatories.org/tasks/browse/CISWCORE-41")
        """
        the tree we're creating (observatory, sites, platforms, instruments)

        rows are lettered, colums numbered.  
         - first row is implied a
         - first column is implied 1
         - site Z, just because 

        O--Sz
        |
        S--S2--P3--I4
        |
        Sb-Pb2-Ib3
        |
        P--I2 <- PlatformDevice, InstrumentDevice2
        |
        Pb <- PlatformDevice b
        |
        I <- InstrumentDevice

        """

        org_id = self.OMS.create_marine_facility(any_old(RT.Org))

        def create_under_org(resource_type, extra_fields=None):
            obj = any_old(resource_type, extra_fields)

            if RT.InstrumentDevice == resource_type:
                resource_id = self.IMS.create_instrument_device(obj)
            else:
                resource_id, _ = self.RR.create(obj)

            self.OMS.assign_resource_to_observatory_org(
                resource_id=resource_id, org_id=org_id)
            return resource_id

        #stuff we control
        observatory_id = create_under_org(RT.Observatory)
        subsite_id = create_under_org(RT.Subsite)
        subsite2_id = create_under_org(RT.Subsite)
        subsiteb_id = create_under_org(RT.Subsite)
        subsitez_id = create_under_org(RT.Subsite)
        platform_site_id = create_under_org(RT.PlatformSite)
        platform_siteb_id = create_under_org(RT.PlatformSite)
        platform_siteb2_id = create_under_org(RT.PlatformSite)
        platform_site3_id = create_under_org(RT.PlatformSite)
        instrument_site_id = create_under_org(RT.InstrumentSite)
        instrument_site2_id = create_under_org(RT.InstrumentSite)
        instrument_siteb3_id = create_under_org(RT.InstrumentSite)
        instrument_site4_id = create_under_org(RT.InstrumentSite)

        #stuff we associate to
        instrument_device_id = create_under_org(RT.InstrumentDevice)
        instrument_device2_id = create_under_org(RT.InstrumentDevice)
        platform_device_id = create_under_org(RT.PlatformDevice)
        platform_deviceb_id = create_under_org(RT.PlatformDevice)
        instrument_model_id, _ = self.RR.create(any_old(RT.InstrumentModel))
        platform_model_id, _ = self.RR.create(any_old(RT.PlatformModel))
        deployment_id, _ = self.RR.create(any_old(RT.Deployment))

        # marine tracking resources
        asset_id = create_under_org(RT.Asset)
        asset_type_id = create_under_org(RT.AssetType)
        event_duration_id = create_under_org(RT.EventDuration)
        event_duration_type_id = create_under_org(RT.EventDurationType)

        #observatory
        self.RR.create_association(observatory_id, PRED.hasSite, subsite_id)
        self.RR.create_association(observatory_id, PRED.hasSite, subsitez_id)

        #site
        self.RR.create_association(subsite_id, PRED.hasSite, subsite2_id)
        self.RR.create_association(subsite_id, PRED.hasSite, subsiteb_id)
        self.RR.create_association(subsite2_id, PRED.hasSite,
                                   platform_site3_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite,
                                   platform_siteb2_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite, platform_site_id)

        #platform_site(s)
        self.RR.create_association(platform_site3_id, PRED.hasSite,
                                   instrument_site4_id)
        self.RR.create_association(platform_siteb2_id, PRED.hasSite,
                                   instrument_siteb3_id)
        self.RR.create_association(platform_site_id, PRED.hasSite,
                                   instrument_site2_id)
        self.RR.create_association(platform_site_id, PRED.hasSite,
                                   platform_siteb_id)
        self.RR.create_association(platform_siteb_id, PRED.hasSite,
                                   instrument_site_id)

        self.RR.create_association(platform_siteb_id, PRED.hasDevice,
                                   platform_deviceb_id)
        #test network parent link
        self.OMS.assign_device_to_network_parent(platform_device_id,
                                                 platform_deviceb_id)

        self.RR.create_association(platform_site_id, PRED.hasModel,
                                   platform_model_id)
        self.RR.create_association(platform_site_id, PRED.hasDevice,
                                   platform_device_id)
        self.RR.create_association(platform_site_id, PRED.hasDeployment,
                                   deployment_id)

        #instrument_site(s)
        self.RR.create_association(instrument_site_id, PRED.hasModel,
                                   instrument_model_id)
        self.RR.create_association(instrument_site_id, PRED.hasDevice,
                                   instrument_device_id)
        self.RR.create_association(instrument_site_id, PRED.hasDeployment,
                                   deployment_id)

        self.RR.create_association(instrument_site2_id, PRED.hasDevice,
                                   instrument_device2_id)

        #platform_device
        self.RR.create_association(platform_device_id, PRED.hasModel,
                                   platform_model_id)

        #instrument_device
        self.RR.create_association(instrument_device_id, PRED.hasModel,
                                   instrument_model_id)
        self.RR.create_association(instrument_device2_id, PRED.hasModel,
                                   instrument_model_id)

        ret = DotDict()
        ret.org_id = org_id
        ret.observatory_id = observatory_id
        ret.subsite_id = subsite_id
        ret.subsite2_id = subsite2_id
        ret.subsiteb_id = subsiteb_id
        ret.subsitez_id = subsitez_id
        ret.platform_site_id = platform_site_id
        ret.platform_siteb_id = platform_siteb_id
        ret.platform_siteb2_id = platform_siteb2_id
        ret.platform_site3_id = platform_site3_id
        ret.instrument_site_id = instrument_site_id
        ret.instrument_site2_id = instrument_site2_id
        ret.instrument_siteb3_id = instrument_siteb3_id
        ret.instrument_site4_id = instrument_site4_id

        ret.instrument_device_id = instrument_device_id
        ret.instrument_device2_id = instrument_device2_id
        ret.platform_device_id = platform_device_id
        ret.platform_deviceb_id = platform_deviceb_id
        ret.instrument_model_id = instrument_model_id
        ret.platform_model_id = platform_model_id
        ret.deployment_id = deployment_id

        ret.asset_id = asset_id
        ret.asset_type_id = asset_type_id
        ret.event_duration_id = event_duration_id
        ret.event_duration_type_id = event_duration_type_id

        return ret

    #@unittest.skip("targeting")
    def test_create_observatory(self):
        observatory_obj = IonObject(RT.Observatory,
                                    name='TestFacility',
                                    description='some new mf')
        observatory_id = self.OMS.create_observatory(observatory_obj)
        self.OMS.force_delete_observatory(observatory_id)

    #@unittest.skip("targeting")
    def _do_test_create_geospatial_point_center(self, resources):
        platformsite_obj = IonObject(RT.PlatformSite,
                                     name='TestPlatformSite',
                                     description='some new TestPlatformSite')
        geo_index_obj = IonObject(OT.GeospatialBounds)
        geo_index_obj.geospatial_latitude_limit_north = 20.0
        geo_index_obj.geospatial_latitude_limit_south = 10.0
        geo_index_obj.geospatial_longitude_limit_east = 15.0
        geo_index_obj.geospatial_longitude_limit_west = 20.0
        platformsite_obj.constraint_list = [geo_index_obj]

        platformsite_id = self.OMS.create_platform_site(platformsite_obj)

        # now get the dp back to see if it was updated
        platformsite_obj = self.OMS.read_platform_site(platformsite_id)
        self.assertEquals('some new TestPlatformSite',
                          platformsite_obj.description)
        self.assertAlmostEqual(15.0,
                               platformsite_obj.geospatial_point_center.lat,
                               places=1)

        #now adjust a few params
        platformsite_obj.description = 'some old TestPlatformSite'
        geo_index_obj = IonObject(OT.GeospatialBounds)
        geo_index_obj.geospatial_latitude_limit_north = 30.0
        geo_index_obj.geospatial_latitude_limit_south = 20.0
        platformsite_obj.constraint_list = [geo_index_obj]
        update_result = self.OMS.update_platform_site(platformsite_obj)

        # now get the dp back to see if it was updated
        platformsite_obj = self.OMS.read_platform_site(platformsite_id)
        self.assertEquals('some old TestPlatformSite',
                          platformsite_obj.description)
        self.assertAlmostEqual(25.0,
                               platformsite_obj.geospatial_point_center.lat,
                               places=1)

        self.OMS.force_delete_platform_site(platformsite_id)

    #@unittest.skip("targeting")
    def _do_test_find_observatory_org(self, resources):
        log.debug("Make TestOrg")
        org_obj = IonObject(RT.Org,
                            name='TestOrg',
                            description='some new mf org')

        org_id = self.OMS.create_marine_facility(org_obj)

        log.debug("Make Observatory")
        observatory_obj = IonObject(RT.Observatory,
                                    name='TestObservatory',
                                    description='some new obs')
        observatory_id = self.OMS.create_observatory(observatory_obj)

        log.debug("assign observatory to org")
        self.OMS.assign_resource_to_observatory_org(observatory_id, org_id)

        log.debug("verify assigment")
        org_objs = self.OMS.find_org_by_observatory(observatory_id)
        self.assertEqual(1, len(org_objs))
        self.assertEqual(org_id, org_objs[0]._id)
        log.debug("org_id=<" + org_id + ">")

        log.debug("create a subsite with parent Observatory")
        subsite_obj = IonObject(RT.Subsite,
                                name='TestSubsite',
                                description='sample subsite')
        subsite_id = self.OMS.create_subsite(subsite_obj, observatory_id)
        self.assertIsNotNone(subsite_id, "Subsite not created.")

        log.debug("verify that Subsite is linked to Observatory")
        mf_subsite_assoc = self.RR.get_association(observatory_id,
                                                   PRED.hasSite, subsite_id)
        self.assertIsNotNone(mf_subsite_assoc,
                             "Subsite not connected to Observatory.")

        log.debug("add the Subsite as a resource of this Observatory")
        self.OMS.assign_resource_to_observatory_org(resource_id=subsite_id,
                                                    org_id=org_id)
        log.debug("verify that Subsite is linked to Org")
        org_subsite_assoc = self.RR.get_association(org_id, PRED.hasResource,
                                                    subsite_id)
        self.assertIsNotNone(org_subsite_assoc,
                             "Subsite not connected as resource to Org.")

        log.debug("create a logical platform with parent Subsite")
        platform_site_obj = IonObject(RT.PlatformSite,
                                      name='TestPlatformSite',
                                      description='sample logical platform')
        platform_site_id = self.OMS.create_platform_site(
            platform_site_obj, subsite_id)
        self.assertIsNotNone(platform_site_id, "PlatformSite not created.")

        log.debug("verify that PlatformSite is linked to Site")
        site_lp_assoc = self.RR.get_association(subsite_id, PRED.hasSite,
                                                platform_site_id)
        self.assertIsNotNone(site_lp_assoc,
                             "PlatformSite not connected to Site.")

        log.debug("add the PlatformSite as a resource of this Observatory")
        self.OMS.assign_resource_to_observatory_org(
            resource_id=platform_site_id, org_id=org_id)
        log.debug("verify that PlatformSite is linked to Org")
        org_lp_assoc = self.RR.get_association(org_id, PRED.hasResource,
                                               platform_site_id)
        self.assertIsNotNone(org_lp_assoc,
                             "PlatformSite not connected as resource to Org.")

        log.debug("create a logical instrument with parent logical platform")
        instrument_site_obj = IonObject(
            RT.InstrumentSite,
            name='TestInstrumentSite',
            description='sample logical instrument')
        instrument_site_id = self.OMS.create_instrument_site(
            instrument_site_obj, platform_site_id)
        self.assertIsNotNone(instrument_site_id, "InstrumentSite not created.")

        log.debug("verify that InstrumentSite is linked to PlatformSite")
        li_lp_assoc = self.RR.get_association(platform_site_id, PRED.hasSite,
                                              instrument_site_id)
        self.assertIsNotNone(li_lp_assoc,
                             "InstrumentSite not connected to PlatformSite.")

        log.debug("add the InstrumentSite as a resource of this Observatory")
        self.OMS.assign_resource_to_observatory_org(
            resource_id=instrument_site_id, org_id=org_id)
        log.debug("verify that InstrumentSite is linked to Org")
        org_li_assoc = self.RR.get_association(org_id, PRED.hasResource,
                                               instrument_site_id)
        self.assertIsNotNone(
            org_li_assoc, "InstrumentSite not connected as resource to Org.")

        log.debug(
            "remove the InstrumentSite as a resource of this Observatory")
        self.OMS.unassign_resource_from_observatory_org(
            instrument_site_id, org_id)
        log.debug("verify that InstrumentSite is linked to Org")
        assocs, _ = self.RR.find_objects(org_id,
                                         PRED.hasResource,
                                         RT.InstrumentSite,
                                         id_only=True)
        self.assertEqual(0, len(assocs))

        log.debug(
            "remove the InstrumentSite, association should drop automatically")
        self.OMS.delete_instrument_site(instrument_site_id)
        assocs, _ = self.RR.find_objects(platform_site_id,
                                         PRED.hasSite,
                                         RT.InstrumentSite,
                                         id_only=True)
        self.assertEqual(0, len(assocs))

        log.debug("remove the PlatformSite as a resource of this Observatory")
        self.OMS.unassign_resource_from_observatory_org(
            platform_site_id, org_id)
        log.debug("verify that PlatformSite is linked to Org")
        assocs, _ = self.RR.find_objects(org_id,
                                         PRED.hasResource,
                                         RT.PlatformSite,
                                         id_only=True)
        self.assertEqual(0, len(assocs))

        log.debug("remove the Site as a resource of this Observatory")
        self.OMS.unassign_resource_from_observatory_org(subsite_id, org_id)
        log.debug("verify that Site is linked to Org")
        assocs, _ = self.RR.find_objects(org_id,
                                         PRED.hasResource,
                                         RT.Subsite,
                                         id_only=True)
        self.assertEqual(0, len(assocs))

        self.RR.delete(org_id)
        self.OMS.force_delete_observatory(observatory_id)
        self.OMS.force_delete_subsite(subsite_id)
        self.OMS.force_delete_platform_site(platform_site_id)
        self.OMS.force_delete_instrument_site(instrument_site_id)

    @attr('EXT')
    @unittest.skipIf(os.getenv(
        'CEI_LAUNCH_TEST', False
    ), 'Skip test while in CEI LAUNCH mode as it depends on modifying CFG on service side'
                     )
    def test_observatory_extensions(self):
        self.patch_cfg(CFG["container"],
                       {"extended_resources": {
                           "strip_results": False
                       }})

        obs_id = self.RR2.create(any_old(RT.Observatory))
        pss_id = self.RR2.create(
            any_old(RT.PlatformSite, dict(alt_resource_type="StationSite")))
        pas_id = self.RR2.create(
            any_old(RT.PlatformSite,
                    dict(alt_resource_type="PlatformAssemblySite")))
        pcs_id = self.RR2.create(
            any_old(RT.PlatformSite,
                    dict(alt_resource_type="PlatformComponentSite")))
        ins_id = self.RR2.create(any_old(RT.InstrumentSite))

        obs_obj = self.RR2.read(obs_id)
        pss_obj = self.RR2.read(pss_id)
        pas_obj = self.RR2.read(pas_id)
        pcs_obj = self.RR2.read(pcs_id)
        ins_obj = self.RR2.read(ins_id)

        self.RR2.create_association(obs_id, PRED.hasSite, pss_id)
        self.RR2.create_association(pss_id, PRED.hasSite, pas_id)
        self.RR2.create_association(pas_id, PRED.hasSite, pcs_id)
        self.RR2.create_association(pcs_id, PRED.hasSite, ins_id)

        extended_obs = self.OMS.get_observatory_site_extension(obs_id,
                                                               user_id=12345)
        self.assertEqual([pss_obj], extended_obs.platform_station_sites)
        self.assertEqual([pas_obj], extended_obs.platform_assembly_sites)
        self.assertEqual([pcs_obj], extended_obs.platform_component_sites)
        self.assertEqual([ins_obj], extended_obs.instrument_sites)

        extended_pss = self.OMS.get_observatory_site_extension(obs_id,
                                                               user_id=12345)
        self.assertEqual([pas_obj], extended_pss.platform_assembly_sites)
        self.assertEqual([pcs_obj], extended_pss.platform_component_sites)
        self.assertEqual([ins_obj], extended_pss.instrument_sites)

        extended_pas = self.OMS.get_observatory_site_extension(pas_id,
                                                               user_id=12345)
        self.assertEqual([pcs_obj], extended_pas.platform_component_sites)
        self.assertEqual([ins_obj], extended_pas.instrument_sites)

        extended_pcs = self.OMS.get_platform_component_site_extension(
            pcs_id, user_id=12345)
        self.assertEqual([ins_obj], extended_pcs.instrument_sites)

    #@unittest.skip("in development...")
    @attr('EXT')
    @attr('EXT1')
    @unittest.skipIf(os.getenv(
        'CEI_LAUNCH_TEST', False
    ), 'Skip test while in CEI LAUNCH mode as it depends on modifying CFG on service side'
                     )
    def test_observatory_org_extended(self):
        self.patch_cfg(CFG["container"],
                       {"extended_resources": {
                           "strip_results": False
                       }})

        stuff = self._make_associations()

        parsed_pdict_id = self.dataset_management.read_parameter_dictionary_by_name(
            'ctd_parsed_param_dict', id_only=True)

        parsed_stream_def_id = self.pubsubcli.create_stream_definition(
            name='parsed', parameter_dictionary_id=parsed_pdict_id)
        dp_obj = IonObject(RT.DataProduct,
                           name='the parsed data',
                           description='ctd stream test')

        data_product_id1 = self.dpclient.create_data_product(
            data_product=dp_obj, stream_definition_id=parsed_stream_def_id)
        self.damsclient.assign_data_product(
            input_resource_id=stuff.instrument_device_id,
            data_product_id=data_product_id1)

        #Create a  user to be used as regular member
        member_actor_obj = IonObject(RT.ActorIdentity, name='org member actor')
        member_actor_id, _ = self.RR.create(member_actor_obj)
        assert (member_actor_id)
        member_actor_header = get_actor_header(member_actor_id)

        member_user_obj = IonObject(RT.UserInfo, name='org member user')
        member_user_id, _ = self.RR.create(member_user_obj)
        assert (member_user_id)

        self.RR.create_association(subject=member_actor_id,
                                   predicate=PRED.hasInfo,
                                   object=member_user_id)

        #Build the Service Agreement Proposal to enroll a user actor
        sap = IonObject(OT.EnrollmentProposal,
                        consumer=member_actor_id,
                        provider=stuff.org_id)

        sap_response = self.org_management_service.negotiate(
            sap, headers=member_actor_header)

        #enroll the member without using negotiation
        self.org_management_service.enroll_member(org_id=stuff.org_id,
                                                  actor_id=member_actor_id)

        #--------------------------------------------------------------------------------
        # Get the extended Site (platformSite)
        #--------------------------------------------------------------------------------

        try:
            extended_site = self.OMS.get_site_extension(stuff.platform_site_id)
        except:
            log.error('failed to get extended site', exc_info=True)
            raise
        log.debug("extended_site:  %r ", extended_site)
        self.assertEquals(stuff.subsiteb_id, extended_site.parent_site._id)
        self.assertEqual(2, len(extended_site.sites))
        self.assertEqual(2, len(extended_site.platform_devices))
        self.assertEqual(2, len(extended_site.platform_models))
        self.assertIn(stuff.platform_device_id,
                      [o._id for o in extended_site.platform_devices])
        self.assertIn(
            stuff.platform_model_id,
            [o._id for o in extended_site.platform_models if o is not None])

        log.debug(
            "verify that PlatformDeviceb is linked to PlatformDevice with hasNetworkParent link"
        )
        associations = self.RR.find_associations(
            subject=stuff.platform_deviceb_id,
            predicate=PRED.hasNetworkParent,
            object=stuff.platform_device_id,
            id_only=True)
        self.assertIsNotNone(
            associations,
            "PlatformDevice child not connected to PlatformDevice parent.")

        #--------------------------------------------------------------------------------
        # Get the extended Org
        #--------------------------------------------------------------------------------
        #test the extended resource
        extended_org = self.OMS.get_marine_facility_extension(stuff.org_id)
        log.debug("test_observatory_org_extended: extended_org:  %s ",
                  str(extended_org))
        #self.assertEqual(2, len(extended_org.instruments_deployed) )
        #self.assertEqual(1, len(extended_org.platforms_not_deployed) )
        self.assertEqual(2, extended_org.number_of_platforms)
        self.assertEqual(2, len(extended_org.platform_models))

        self.assertEqual(2, extended_org.number_of_instruments)
        self.assertEqual(2, len(extended_org.instrument_models))

        self.assertEqual(1, len(extended_org.members))
        self.assertNotEqual(extended_org.members[0]._id, member_actor_id)
        self.assertEqual(extended_org.members[0]._id, member_user_id)

        self.assertEqual(1, len(extended_org.open_requests))

        self.assertTrue(len(extended_site.deployments) > 0)
        self.assertEqual(len(extended_site.deployments),
                         len(extended_site.deployment_info))

        self.assertEqual(1, extended_org.number_of_assets)
        self.assertEqual(1, extended_org.number_of_asset_types)
        self.assertEqual(1, extended_org.number_of_event_durations)
        self.assertEqual(1, extended_org.number_of_event_duration_types)

        #test the extended resource of the ION org
        ion_org_id = self.org_management_service.find_org()
        extended_org = self.OMS.get_marine_facility_extension(ion_org_id._id,
                                                              user_id=12345)
        log.debug("test_observatory_org_extended: extended_ION_org:  %s ",
                  str(extended_org))
        self.assertEqual(1, len(extended_org.members))
        self.assertEqual(0, extended_org.number_of_platforms)
        #self.assertEqual(1, len(extended_org.sites))

        #--------------------------------------------------------------------------------
        # Get the extended Site
        #--------------------------------------------------------------------------------

        #create device state events to use for op /non-op filtering in extended
        t = get_ion_ts()
        self.event_publisher.publish_event(
            ts_created=t,
            event_type='ResourceAgentStateEvent',
            origin=stuff.instrument_device_id,
            state=ResourceAgentState.STREAMING)

        self.event_publisher.publish_event(
            ts_created=t,
            event_type='ResourceAgentStateEvent',
            origin=stuff.instrument_device2_id,
            state=ResourceAgentState.INACTIVE)
        extended_site = self.OMS.get_site_extension(stuff.instrument_site2_id)

        log.debug("test_observatory_org_extended: extended_site:  %s ",
                  str(extended_site))

        self.dpclient.delete_data_product(data_product_id1)
示例#6
0
class TestObservatoryManagementServiceIntegration(IonIntegrationTestCase):

    def setUp(self):
        # Start container
        #print 'instantiating container'
        self._start_container()
        #container = Container()
        #print 'starting container'
        #container.start()
        #print 'started container'

        self.container.start_rel_from_url('res/deploy/r2deploy.yml')
        self.RR = ResourceRegistryServiceClient(node=self.container.node)
        self.OMS = ObservatoryManagementServiceClient(node=self.container.node)
        self.org_management_service = OrgManagementServiceClient(node=self.container.node)
        self.IMS =  InstrumentManagementServiceClient(node=self.container.node)
        self.dpclient = DataProductManagementServiceClient(node=self.container.node)
        self.pubsubcli =  PubsubManagementServiceClient(node=self.container.node)
        self.damsclient = DataAcquisitionManagementServiceClient(node=self.container.node)
        self.dataset_management = DatasetManagementServiceClient()
        #print 'TestObservatoryManagementServiceIntegration: started services'

        self.event_publisher = EventPublisher()

#    @unittest.skip('this exists only for debugging the launch process')
#    def test_just_the_setup(self):
#        return


    def destroy(self, resource_ids):
        self.OMS.force_delete_observatory(resource_ids.observatory_id)
        self.OMS.force_delete_subsite(resource_ids.subsite_id)
        self.OMS.force_delete_subsite(resource_ids.subsite2_id)
        self.OMS.force_delete_subsite(resource_ids.subsiteb_id)
        self.OMS.force_delete_subsite(resource_ids.subsitez_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb2_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site2_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_siteb3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site4_id)

    #@unittest.skip('targeting')
    def test_resources_associations(self):
        resources = self._make_associations()
        self.destroy(resources)

    #@unittest.skip('targeting')
    def test_find_related_frames_of_reference(self):
        # finding subordinates gives a dict of obj lists, convert objs to ids
        def idify(adict):
            ids = {}
            for k, v in adict.iteritems():
                ids[k] = []
                for obj in v:
                    ids[k].append(obj._id)

            return ids

        # a short version of the function we're testing, with id-ify
        def short(resource_id, output_types):
            ret = self.OMS.find_related_frames_of_reference(resource_id,
                                                            output_types)
            return idify(ret)
            
            
        #set up associations first
        stuff = self._make_associations()
        #basic traversal of tree from instrument to platform
        ids = short(stuff.instrument_site_id, [RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])

        #since this is the first search, just make sure the input inst_id got stripped
        if RT.InstrumentSite in ids:
            self.assertNotIn(stuff.instrument_site_id, ids[RT.InstrumentSite])

        #basic traversal of tree from platform to instrument
        ids = short(stuff.platform_siteb_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])
        self.assertNotIn(stuff.instrument_site2_id, ids[RT.InstrumentSite])


        #full traversal of tree from observatory down to instrument
        ids = short(stuff.observatory_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])


        #full traversal of tree from instrument to observatory
        ids = short(stuff.instrument_site_id, [RT.Observatory])
        self.assertIn(RT.Observatory, ids)
        self.assertIn(stuff.observatory_id, ids[RT.Observatory])


        #partial traversal, only down to platform
        ids = short(stuff.observatory_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site3_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(RT.InstrumentSite, ids)


        #partial traversal, only down to platform
        ids = short(stuff.instrument_site_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertNotIn(RT.Observatory, ids)

        self.destroy(stuff)

    def _make_associations(self):
        """
        create one of each resource and association used by OMS
        to guard against problems in ion-definitions
        """

        #raise unittest.SkipTest("https://jira.oceanobservatories.org/tasks/browse/CISWCORE-41")
        

        """
        the tree we're creating (observatory, sites, platforms, instruments)

        rows are lettered, colums numbered.  
         - first row is implied a
         - first column is implied 1
         - site Z, just because 

        O--Sz
        |
        S--S2--P3--I4
        |
        Sb-Pb2-Ib3
        |
        P--I2 <- PlatformDevice, InstrumentDevice2
        |
        Pb <- PlatformDevice b
        |
        I <- InstrumentDevice

        """

        org_id = self.OMS.create_marine_facility(any_old(RT.Org))

        def create_under_org(resource_type):
            obj = any_old(resource_type)

            if RT.InstrumentDevice == resource_type:
                resource_id = self.IMS.create_instrument_device(obj)
            else:
                resource_id, _ = self.RR.create(obj)

            self.OMS.assign_resource_to_observatory_org(resource_id=resource_id, org_id=org_id)
            return resource_id

        #stuff we control
        observatory_id          = create_under_org(RT.Observatory)
        subsite_id              = create_under_org(RT.Subsite)
        subsite2_id             = create_under_org(RT.Subsite)
        subsiteb_id             = create_under_org(RT.Subsite)
        subsitez_id             = create_under_org(RT.Subsite)
        platform_site_id        = create_under_org(RT.PlatformSite)
        platform_siteb_id       = create_under_org(RT.PlatformSite)
        platform_siteb2_id      = create_under_org(RT.PlatformSite)
        platform_site3_id       = create_under_org(RT.PlatformSite)
        instrument_site_id      = create_under_org(RT.InstrumentSite)
        instrument_site2_id     = create_under_org(RT.InstrumentSite)
        instrument_siteb3_id    = create_under_org(RT.InstrumentSite)
        instrument_site4_id     = create_under_org(RT.InstrumentSite)

        #stuff we associate to
        instrument_device_id    = create_under_org(RT.InstrumentDevice)
        instrument_device2_id   = create_under_org(RT.InstrumentDevice)
        platform_device_id      = create_under_org(RT.PlatformDevice)
        platform_deviceb_id     = create_under_org(RT.PlatformDevice)
        instrument_model_id, _  = self.RR.create(any_old(RT.InstrumentModel))
        platform_model_id, _    = self.RR.create(any_old(RT.PlatformModel))
        deployment_id, _        = self.RR.create(any_old(RT.Deployment))

        #observatory
        self.RR.create_association(observatory_id, PRED.hasSite, subsite_id)
        self.RR.create_association(observatory_id, PRED.hasSite, subsitez_id)

        #site
        self.RR.create_association(subsite_id, PRED.hasSite, subsite2_id)
        self.RR.create_association(subsite_id, PRED.hasSite, subsiteb_id)
        self.RR.create_association(subsite2_id, PRED.hasSite, platform_site3_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite, platform_siteb2_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite, platform_site_id)
        
        #platform_site(s)
        self.RR.create_association(platform_site3_id, PRED.hasSite, instrument_site4_id)
        self.RR.create_association(platform_siteb2_id, PRED.hasSite, instrument_siteb3_id)
        self.RR.create_association(platform_site_id, PRED.hasSite, instrument_site2_id)
        self.RR.create_association(platform_site_id, PRED.hasSite, platform_siteb_id)
        self.RR.create_association(platform_siteb_id, PRED.hasSite, instrument_site_id)

        self.RR.create_association(platform_siteb_id, PRED.hasDevice, platform_deviceb_id)

        self.RR.create_association(platform_site_id, PRED.hasModel, platform_model_id)
        self.RR.create_association(platform_site_id, PRED.hasDevice, platform_device_id)
        self.RR.create_association(platform_site_id, PRED.hasDeployment, deployment_id)

        #instrument_site(s)
        self.RR.create_association(instrument_site_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_site_id, PRED.hasDevice, instrument_device_id)
        self.RR.create_association(instrument_site_id, PRED.hasDeployment, deployment_id)

        self.RR.create_association(instrument_site2_id, PRED.hasDevice, instrument_device2_id)

        #platform_device
        self.RR.create_association(platform_device_id, PRED.hasModel, platform_model_id)

        #instrument_device
        self.RR.create_association(instrument_device_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_device2_id, PRED.hasModel, instrument_model_id)

        ret = DotDict()
        ret.org_id                = org_id
        ret.observatory_id        = observatory_id
        ret.subsite_id            = subsite_id
        ret.subsite2_id           = subsite2_id
        ret.subsiteb_id           = subsiteb_id
        ret.subsitez_id           = subsitez_id
        ret.platform_site_id      = platform_site_id
        ret.platform_siteb_id     = platform_siteb_id
        ret.platform_siteb2_id    = platform_siteb2_id
        ret.platform_site3_id     = platform_site3_id
        ret.instrument_site_id    = instrument_site_id
        ret.instrument_site2_id   = instrument_site2_id
        ret.instrument_siteb3_id  = instrument_siteb3_id
        ret.instrument_site4_id   = instrument_site4_id

        ret.instrument_device_id  = instrument_device_id
        ret.instrument_device2_id = instrument_device2_id
        ret.platform_device_id    = platform_device_id
        ret.platform_deviceb_id    = platform_deviceb_id
        ret.instrument_model_id   = instrument_model_id
        ret.platform_model_id     = platform_model_id
        ret.deployment_id         = deployment_id

        return ret

    #@unittest.skip("targeting")
    def test_create_observatory(self):
        observatory_obj = IonObject(RT.Observatory,
                                        name='TestFacility',
                                        description='some new mf')
        observatory_id = self.OMS.create_observatory(observatory_obj)
        self.OMS.force_delete_observatory(observatory_id)


    #@unittest.skip("targeting")
    def test_find_observatory_org(self):
        org_obj = IonObject(RT.Org,
                            name='TestOrg',
                            description='some new mf org')

        org_id =  self.OMS.create_marine_facility(org_obj)

        observatory_obj = IonObject(RT.Observatory,
                                        name='TestObservatory',
                                        description='some new obs')
        observatory_id = self.OMS.create_observatory(observatory_obj)

        #make association
        
        self.OMS.assign_resource_to_observatory_org(observatory_id, org_id)


        #find association

        org_objs = self.OMS.find_org_by_observatory(observatory_id)
        self.assertEqual(1, len(org_objs))
        self.assertEqual(org_id, org_objs[0]._id)
        print("org_id=<" + org_id + ">")

        #create a subsite with parent Observatory
        subsite_obj =  IonObject(RT.Subsite,
                                name= 'TestSubsite',
                                description = 'sample subsite')
        subsite_id = self.OMS.create_subsite(subsite_obj, observatory_id)
        self.assertIsNotNone(subsite_id, "Subsite not created.")

        # verify that Subsite is linked to Observatory
        mf_subsite_assoc = self.RR.get_association(observatory_id, PRED.hasSite, subsite_id)
        self.assertIsNotNone(mf_subsite_assoc, "Subsite not connected to Observatory.")


        # add the Subsite as a resource of this Observatory
        self.OMS.assign_resource_to_observatory_org(resource_id=subsite_id, org_id=org_id)
        # verify that Subsite is linked to Org
        org_subsite_assoc = self.RR.get_association(org_id, PRED.hasResource, subsite_id)
        self.assertIsNotNone(org_subsite_assoc, "Subsite not connected as resource to Org.")


        #create a logical platform with parent Subsite
        platform_site_obj =  IonObject(RT.PlatformSite,
                                name= 'TestPlatformSite',
                                description = 'sample logical platform')
        platform_site_id = self.OMS.create_platform_site(platform_site_obj, subsite_id)
        self.assertIsNotNone(platform_site_id, "PlatformSite not created.")

        # verify that PlatformSite is linked to Site
        site_lp_assoc = self.RR.get_association(subsite_id, PRED.hasSite, platform_site_id)
        self.assertIsNotNone(site_lp_assoc, "PlatformSite not connected to Site.")


        # add the PlatformSite as a resource of this Observatory
        self.OMS.assign_resource_to_observatory_org(resource_id=platform_site_id, org_id=org_id)
        # verify that PlatformSite is linked to Org
        org_lp_assoc = self.RR.get_association(org_id, PRED.hasResource, platform_site_id)
        self.assertIsNotNone(org_lp_assoc, "PlatformSite not connected as resource to Org.")



        #create a logical instrument with parent logical platform
        instrument_site_obj =  IonObject(RT.InstrumentSite,
                                name= 'TestInstrumentSite',
                                description = 'sample logical instrument')
        instrument_site_id = self.OMS.create_instrument_site(instrument_site_obj, platform_site_id)
        self.assertIsNotNone(instrument_site_id, "InstrumentSite not created.")


        # verify that InstrumentSite is linked to PlatformSite
        li_lp_assoc = self.RR.get_association(platform_site_id, PRED.hasSite, instrument_site_id)
        self.assertIsNotNone(li_lp_assoc, "InstrumentSite not connected to PlatformSite.")


        # add the InstrumentSite as a resource of this Observatory
        self.OMS.assign_resource_to_observatory_org(resource_id=instrument_site_id, org_id=org_id)
        # verify that InstrumentSite is linked to Org
        org_li_assoc = self.RR.get_association(org_id, PRED.hasResource, instrument_site_id)
        self.assertIsNotNone(org_li_assoc, "InstrumentSite not connected as resource to Org.")


        # remove the InstrumentSite as a resource of this Observatory
        self.OMS.unassign_resource_from_observatory_org(instrument_site_id, org_id)
        # verify that InstrumentSite is linked to Org
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.InstrumentSite, id_only=True )
        self.assertEqual(len(assocs), 0)

        # remove the InstrumentSite
        self.OMS.delete_instrument_site(instrument_site_id)
        assocs, _ = self.RR.find_objects(platform_site_id, PRED.hasSite, RT.InstrumentSite, id_only=True )
        self.assertEqual(len(assocs), 1)
        #todo: remove the dangling association


        # remove the PlatformSite as a resource of this Observatory
        self.OMS.unassign_resource_from_observatory_org(platform_site_id, org_id)
        # verify that PlatformSite is linked to Org
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.PlatformSite, id_only=True )
        self.assertEqual(len(assocs), 0)


        # remove the Site as a resource of this Observatory
        self.OMS.unassign_resource_from_observatory_org(subsite_id, org_id)
        # verify that Site is linked to Org
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.Subsite, id_only=True )
        self.assertEqual(len(assocs), 0)

        self.RR.delete(org_id)
        self.OMS.force_delete_observatory(observatory_id)
        self.OMS.force_delete_subsite(subsite_id)
        self.OMS.force_delete_platform_site(platform_site_id)
        self.OMS.force_delete_instrument_site(instrument_site_id)


    #@unittest.skip("in development...")
    @attr('EXT')
    def test_observatory_org_extended(self):

        stuff = self._make_associations()

        parsed_pdict_id = self.dataset_management.read_parameter_dictionary_by_name('ctd_parsed_param_dict',
                                                                                    id_only=True)
        parsed_stream_def_id = self.pubsubcli.create_stream_definition(name='parsed',
                                                                       parameter_dictionary_id=parsed_pdict_id)
        tdom, sdom = time_series_domain()
        sdom = sdom.dump()
        tdom = tdom.dump()
        dp_obj = IonObject(RT.DataProduct,
            name='the parsed data',
            description='ctd stream test',
            temporal_domain = tdom,
            spatial_domain = sdom)

        data_product_id1 = self.dpclient.create_data_product(data_product=dp_obj,
                                                             stream_definition_id=parsed_stream_def_id)
        self.damsclient.assign_data_product(input_resource_id=stuff.instrument_device_id,
                                            data_product_id=data_product_id1)


        #--------------------------------------------------------------------------------
        # Get the extended Site (platformSite)
        #--------------------------------------------------------------------------------

        extended_site = self.OMS.get_site_extension(stuff.platform_site_id)
        log.debug("extended_site:  %s ", str(extended_site))
        self.assertEqual(1, len(extended_site.platform_devices))
        self.assertEqual(1, len(extended_site.platform_models))
        self.assertEqual(stuff.platform_device_id, extended_site.platform_devices[0]._id)
        self.assertEqual(stuff.platform_model_id, extended_site.platform_models[0]._id)

        #--------------------------------------------------------------------------------
        # Get the extended Org
        #--------------------------------------------------------------------------------
        #test the extended resource
        extended_org = self.org_management_service.get_marine_facility_extension(stuff.org_id)
        log.debug("test_observatory_org_extended: extended_org:  %s ", str(extended_org))
        #self.assertEqual(2, len(extended_org.instruments_deployed) )
        #self.assertEqual(1, len(extended_org.platforms_not_deployed) )
        self.assertEqual(2, extended_org.number_of_platforms)
        self.assertEqual(2, len(extended_org.platform_models) )

        self.assertEqual(2, extended_org.number_of_instruments)
        self.assertEqual(2, len(extended_org.instrument_models) )

        #test the extended resource of the ION org
        ion_org_id = self.org_management_service.find_org()
        extended_org = self.org_management_service.get_marine_facility_extension(ion_org_id._id, user_id=12345)
        log.debug("test_observatory_org_extended: extended_ION_org:  %s ", str(extended_org))
        self.assertEqual(0, len(extended_org.members))
        self.assertEqual(0, extended_org.number_of_platforms)
        #self.assertEqual(1, len(extended_org.sites))



        #--------------------------------------------------------------------------------
        # Get the extended Site
        #--------------------------------------------------------------------------------

        #create device state events to use for op /non-op filtering in extended
        t = get_ion_ts()
        self.event_publisher.publish_event(  ts_created= t,  event_type = 'ResourceAgentStateEvent',
            origin = stuff.instrument_device_id, state=ResourceAgentState.STREAMING  )

        self.event_publisher.publish_event( ts_created= t,   event_type = 'ResourceAgentStateEvent',
            origin = stuff.instrument_device2_id, state=ResourceAgentState.INACTIVE )
        extended_site =  self.OMS.get_site_extension(stuff.instrument_site2_id)


        log.debug("test_observatory_org_extended: extended_site:  %s ", str(extended_site))

        self.dpclient.delete_data_product(data_product_id1)
class TestObservatoryManagementServiceIntegration(IonIntegrationTestCase):

    def setUp(self):
        # Start container
        #print 'instantiating container'
        self._start_container()
        #container = Container()
        #print 'starting container'
        #container.start()
        #print 'started container'

        self.container.start_rel_from_url('res/deploy/r2deploy.yml')
        self.RR = ResourceRegistryServiceClient(node=self.container.node)
        self.OMS = ObservatoryManagementServiceClient(node=self.container.node)
        self.org_management_service = OrgManagementServiceClient(node=self.container.node)
        self.instrument_management_service =  InstrumentManagementServiceClient(node=self.container.node)
        #print 'TestObservatoryManagementServiceIntegration: started services'

#    @unittest.skip('this exists only for debugging the launch process')
#    def test_just_the_setup(self):
#        return


    def destroy(self, resource_ids):
        self.OMS.force_delete_observatory(resource_ids.observatory_id)
        self.OMS.force_delete_subsite(resource_ids.subsite_id)
        self.OMS.force_delete_subsite(resource_ids.subsite2_id)
        self.OMS.force_delete_subsite(resource_ids.subsiteb_id)
        self.OMS.force_delete_subsite(resource_ids.subsitez_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_siteb2_id)
        self.OMS.force_delete_platform_site(resource_ids.platform_site3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site2_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_siteb3_id)
        self.OMS.force_delete_instrument_site(resource_ids.instrument_site4_id)

    #@unittest.skip('targeting')
    def test_resources_associations(self):
        resources = self._make_associations()
        self.destroy(resources)

    #@unittest.skip('targeting')
    def test_find_related_frames_of_reference(self):
        # finding subordinates gives a dict of obj lists, convert objs to ids
        def idify(adict):
            ids = {}
            for k, v in adict.iteritems():
                ids[k] = []
                for obj in v:
                    ids[k].append(obj._id)

            return ids

        # a short version of the function we're testing, with id-ify
        def short(resource_id, output_types):
            ret = self.OMS.find_related_frames_of_reference(resource_id,
                                                            output_types)
            return idify(ret)
            
            
        #set up associations first
        stuff = self._make_associations()
        #basic traversal of tree from instrument to platform
        ids = short(stuff.instrument_site_id, [RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])

        #since this is the first search, just make sure the input inst_id got stripped
        if RT.InstrumentSite in ids:
            self.assertNotIn(stuff.instrument_site_id, ids[RT.InstrumentSite])

        #basic traversal of tree from platform to instrument
        ids = short(stuff.platform_siteb_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])
        self.assertNotIn(stuff.instrument_site2_id, ids[RT.InstrumentSite])


        #full traversal of tree from observatory down to instrument
        ids = short(stuff.observatory_id, [RT.InstrumentSite])
        self.assertIn(RT.InstrumentSite, ids)
        self.assertIn(stuff.instrument_site_id, ids[RT.InstrumentSite])


        #full traversal of tree from instrument to observatory
        ids = short(stuff.instrument_site_id, [RT.Observatory])
        self.assertIn(RT.Observatory, ids)
        self.assertIn(stuff.observatory_id, ids[RT.Observatory])


        #partial traversal, only down to platform
        ids = short(stuff.observatory_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site3_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(RT.InstrumentSite, ids)


        #partial traversal, only down to platform
        ids = short(stuff.instrument_site_id, [RT.Subsite, RT.PlatformSite])
        self.assertIn(RT.PlatformSite, ids)
        self.assertIn(RT.Subsite, ids)
        self.assertIn(stuff.platform_siteb_id, ids[RT.PlatformSite])
        self.assertIn(stuff.platform_site_id, ids[RT.PlatformSite])
        self.assertIn(stuff.subsite_id, ids[RT.Subsite])
        self.assertIn(stuff.subsiteb_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsite2_id, ids[RT.Subsite])
        self.assertNotIn(stuff.subsitez_id, ids[RT.Subsite])
        self.assertNotIn(stuff.platform_siteb2_id, ids[RT.PlatformSite])
        self.assertNotIn(RT.Observatory, ids)

        self.destroy(stuff)

    def _make_associations(self):
        """
        create one of each resource and association used by OMS
        to guard against problems in ion-definitions
        """

        #raise unittest.SkipTest("https://jira.oceanobservatories.org/tasks/browse/CISWCORE-41")
        

        """
        the tree we're creating (observatory, sites, platforms, instruments)

        rows are lettered, colums numbered.  
         - first row is implied a
         - first column is implied 1
         - site Z, just because 

        O--Sz
        |
        S--S2--P3--I4
        |
        Sb-Pb2-Ib3
        |
        P--I2
        |
        Pb
        |
        I

        """

        #stuff we control
        observatory_id, _       = self.RR.create(any_old(RT.Observatory))
        subsite_id, _           = self.RR.create(any_old(RT.Subsite))
        subsite2_id, _          = self.RR.create(any_old(RT.Subsite))
        subsiteb_id, _          = self.RR.create(any_old(RT.Subsite))
        subsitez_id, _          = self.RR.create(any_old(RT.Subsite))
        platform_site_id, _     = self.RR.create(any_old(RT.PlatformSite))
        platform_siteb_id, _    = self.RR.create(any_old(RT.PlatformSite))
        platform_siteb2_id, _   = self.RR.create(any_old(RT.PlatformSite))
        platform_site3_id, _    = self.RR.create(any_old(RT.PlatformSite))
        instrument_site_id, _   = self.RR.create(any_old(RT.InstrumentSite))
        instrument_site2_id, _  = self.RR.create(any_old(RT.InstrumentSite))
        instrument_siteb3_id, _ = self.RR.create(any_old(RT.InstrumentSite))
        instrument_site4_id, _  = self.RR.create(any_old(RT.InstrumentSite))

        #stuff we associate to
        instrument_model_id, _  = self.RR.create(any_old(RT.InstrumentModel))
        instrument_device_id, _ = self.RR.create(any_old(RT.InstrumentDevice))
        platform_model_id, _    = self.RR.create(any_old(RT.PlatformModel))
        platform_device_id, _   = self.RR.create(any_old(RT.PlatformDevice))
        deployment_id, _        = self.RR.create(any_old(RT.Deployment))

        #observatory
        self.RR.create_association(observatory_id, PRED.hasSite, subsite_id)
        self.RR.create_association(observatory_id, PRED.hasSite, subsitez_id)

        #site
        self.RR.create_association(subsite_id, PRED.hasSite, subsite2_id)
        self.RR.create_association(subsite_id, PRED.hasSite, subsiteb_id)
        self.RR.create_association(subsite2_id, PRED.hasSite, platform_site3_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite, platform_siteb2_id)
        self.RR.create_association(subsiteb_id, PRED.hasSite, platform_site_id)
        
        #platform_site
        self.RR.create_association(platform_site3_id, PRED.hasSite, instrument_site4_id)
        self.RR.create_association(platform_siteb2_id, PRED.hasSite, instrument_siteb3_id)
        self.RR.create_association(platform_site_id, PRED.hasSite, instrument_site2_id)
        self.RR.create_association(platform_site_id, PRED.hasSite, platform_siteb_id)
        self.RR.create_association(platform_siteb_id, PRED.hasSite, instrument_site_id)

        self.RR.create_association(platform_site_id, PRED.hasModel, platform_model_id)
        self.RR.create_association(platform_site_id, PRED.hasDevice, platform_device_id)
        self.RR.create_association(platform_site_id, PRED.hasDeployment, deployment_id)

        #instrument_site
        self.RR.create_association(instrument_site_id, PRED.hasModel, instrument_model_id)
        self.RR.create_association(instrument_site_id, PRED.hasDevice, instrument_device_id)
        self.RR.create_association(instrument_site_id, PRED.hasDeployment, deployment_id)


        ret = DotDict()
        ret.observatory_id        = observatory_id
        ret.subsite_id            = subsite_id
        ret.subsite2_id           = subsite2_id
        ret.subsiteb_id           = subsiteb_id
        ret.subsitez_id           = subsitez_id
        ret.platform_site_id      = platform_site_id
        ret.platform_siteb_id     = platform_siteb_id
        ret.platform_siteb2_id    = platform_siteb2_id
        ret.platform_site3_id     = platform_site3_id
        ret.instrument_site_id    = instrument_site_id
        ret.instrument_site2_id   = instrument_site2_id
        ret.instrument_siteb3_id  = instrument_siteb3_id
        ret.instrument_site4_id   = instrument_site4_id

        
        return ret

    #@unittest.skip("targeting")
    def test_create_observatory(self):
        observatory_obj = IonObject(RT.Observatory,
                                        name='TestFacility',
                                        description='some new mf')
        observatory_id = self.OMS.create_observatory(observatory_obj)
        self.OMS.force_delete_observatory(observatory_id)


    #@unittest.skip("targeting")
    def test_find_observatory_org(self):
        org_obj = IonObject(RT.Org,
                            name='TestOrg',
                            description='some new mf org')

        org_id =  self.OMS.create_marine_facility(org_obj)

        observatory_obj = IonObject(RT.Observatory,
                                        name='TestObservatory',
                                        description='some new obs')
        observatory_id = self.OMS.create_observatory(observatory_obj)

        #make association
        
        self.OMS.assign_resource_to_observatory_org(observatory_id, org_id)


        #find association

        org_objs = self.OMS.find_org_by_observatory(observatory_id)
        self.assertEqual(1, len(org_objs))
        self.assertEqual(org_id, org_objs[0]._id)
        print("org_id=<" + org_id + ">")

        #create a subsite with parent Observatory
        subsite_obj =  IonObject(RT.Subsite,
                                name= 'TestSubsite',
                                description = 'sample subsite')
        subsite_id = self.OMS.create_subsite(subsite_obj, observatory_id)
        self.assertIsNotNone(subsite_id, "Subsite not created.")

        # verify that Subsite is linked to Observatory
        mf_subsite_assoc = self.RR.get_association(observatory_id, PRED.hasSite, subsite_id)
        self.assertIsNotNone(mf_subsite_assoc, "Subsite not connected to Observatory.")


        # add the Subsite as a resource of this Observatory
        self.OMS.assign_resource_to_observatory_org(resource_id=subsite_id, org_id=org_id)
        # verify that Subsite is linked to Org
        org_subsite_assoc = self.RR.get_association(org_id, PRED.hasResource, subsite_id)
        self.assertIsNotNone(org_subsite_assoc, "Subsite not connected as resource to Org.")


        #create a logical platform with parent Subsite
        platform_site_obj =  IonObject(RT.PlatformSite,
                                name= 'TestPlatformSite',
                                description = 'sample logical platform')
        platform_site_id = self.OMS.create_platform_site(platform_site_obj, subsite_id)
        self.assertIsNotNone(platform_site_id, "PlatformSite not created.")

        # verify that PlatformSite is linked to Site
        site_lp_assoc = self.RR.get_association(subsite_id, PRED.hasSite, platform_site_id)
        self.assertIsNotNone(site_lp_assoc, "PlatformSite not connected to Site.")


        # add the PlatformSite as a resource of this Observatory
        self.OMS.assign_resource_to_observatory_org(resource_id=platform_site_id, org_id=org_id)
        # verify that PlatformSite is linked to Org
        org_lp_assoc = self.RR.get_association(org_id, PRED.hasResource, platform_site_id)
        self.assertIsNotNone(org_lp_assoc, "PlatformSite not connected as resource to Org.")



        #create a logical instrument with parent logical platform
        instrument_site_obj =  IonObject(RT.InstrumentSite,
                                name= 'TestInstrumentSite',
                                description = 'sample logical instrument')
        instrument_site_id = self.OMS.create_instrument_site(instrument_site_obj, platform_site_id)
        self.assertIsNotNone(instrument_site_id, "InstrumentSite not created.")


        # verify that InstrumentSite is linked to PlatformSite
        li_lp_assoc = self.RR.get_association(platform_site_id, PRED.hasSite, instrument_site_id)
        self.assertIsNotNone(li_lp_assoc, "InstrumentSite not connected to PlatformSite.")


        # add the InstrumentSite as a resource of this Observatory
        self.OMS.assign_resource_to_observatory_org(resource_id=instrument_site_id, org_id=org_id)
        # verify that InstrumentSite is linked to Org
        org_li_assoc = self.RR.get_association(org_id, PRED.hasResource, instrument_site_id)
        self.assertIsNotNone(org_li_assoc, "InstrumentSite not connected as resource to Org.")


        # remove the InstrumentSite as a resource of this Observatory
        self.OMS.unassign_resource_from_observatory_org(instrument_site_id, org_id)
        # verify that InstrumentSite is linked to Org
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.InstrumentSite, id_only=True )
        self.assertEqual(len(assocs), 0)

        # remove the InstrumentSite
        self.OMS.delete_instrument_site(instrument_site_id)
        assocs, _ = self.RR.find_objects(platform_site_id, PRED.hasSite, RT.InstrumentSite, id_only=True )
        self.assertEqual(len(assocs), 1)
        #todo: remove the dangling association


        # remove the PlatformSite as a resource of this Observatory
        self.OMS.unassign_resource_from_observatory_org(platform_site_id, org_id)
        # verify that PlatformSite is linked to Org
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.PlatformSite, id_only=True )
        self.assertEqual(len(assocs), 0)


        # remove the Site as a resource of this Observatory
        self.OMS.unassign_resource_from_observatory_org(subsite_id, org_id)
        # verify that Site is linked to Org
        assocs,_ = self.RR.find_objects(org_id, PRED.hasResource, RT.Subsite, id_only=True )
        self.assertEqual(len(assocs), 0)

        self.RR.delete(org_id)
        self.OMS.force_delete_observatory(observatory_id)
        self.OMS.force_delete_subsite(subsite_id)
        self.OMS.force_delete_platform_site(platform_site_id)
        self.OMS.force_delete_instrument_site(instrument_site_id)

    #@unittest.skip("in development...")
    def test_observatory_org_extended(self):

        org_obj = IonObject(RT.Org,
            name='TestOrg',
            description='some new mf org')

        org_id =  self.OMS.create_marine_facility(org_obj)

        observatory_obj = IonObject(RT.Observatory,
            name='TestObservatory',
            description='some new obs')
        observatory_id = self.OMS.create_observatory(observatory_obj)

        #make association
        self.OMS.assign_resource_to_observatory_org(observatory_id, org_id)
        log.debug("test_observatory_org_extended: org_id:  %s ", str(org_id))

        #create a PlatformSite with parent Observatory
        subsite_obj =  IonObject(RT.PlatformSite,
            name= 'PlatformSite1',
            description = 'sample PlatformSite')
        pltfrm_site_id = self.OMS.create_platform_site(subsite_obj, observatory_id)
        self.assertIsNotNone(pltfrm_site_id, "PlatformSite not created.")
        self.OMS.assign_resource_to_observatory_org(resource_id=pltfrm_site_id, org_id=org_id)


        #create a InstrumentSite with parent Observatory
        subsite_obj =  IonObject(RT.InstrumentSite,
            name= 'InstrumentSite1',
            description = 'sample InstrumentSite')
        inst_site_id = self.OMS.create_instrument_site(subsite_obj, pltfrm_site_id)
        self.assertIsNotNone(inst_site_id, "InstrumentSite not created.")
        self.OMS.assign_resource_to_observatory_org(resource_id=inst_site_id, org_id=org_id)

        # create two PLATFORM devices, one deployed and one not
        platfrmDevice1_obj = IonObject(RT.PlatformDevice,
            name='PlatformDevice1',
            description="PlatformDevice1")
        platfrmDevice1_id = self.instrument_management_service.create_platform_device(platfrmDevice1_obj)
        self.OMS.assign_resource_to_observatory_org(resource_id=platfrmDevice1_id, org_id=org_id)
        self.RR.create_association(subject=pltfrm_site_id, predicate=PRED.hasDevice, object=platfrmDevice1_id)


        platfrmDevice2_obj = IonObject(RT.PlatformDevice,
            name='PlatformDevice2',
            description="PlatformDevice2")
        platfrmDevice2_id = self.instrument_management_service.create_platform_device(platfrmDevice2_obj)
        self.OMS.assign_resource_to_observatory_org(resource_id=platfrmDevice2_id, org_id=org_id)


        # create two INSTRUMENT devices, one deployed and one not
        instDevice1_obj = IonObject(RT.InstrumentDevice,
            name='SBE37IMDevice1',
            description="SBE37IMDevice1",
            serial_number="1" )
        instDevice1_id = self.instrument_management_service.create_instrument_device(instrument_device=instDevice1_obj)
        self.OMS.assign_resource_to_observatory_org(resource_id=instDevice1_id, org_id=org_id)
        self.RR.create_association(subject=inst_site_id, predicate=PRED.hasDevice, object=instDevice1_id)

        instDevice2_obj = IonObject(RT.InstrumentDevice,
            name='SBE37IMDevice2',
            description="SBE37IMDevice2",
            serial_number="2" )
        instDevice2_id = self.instrument_management_service.create_instrument_device(instrument_device=instDevice2_obj)
        self.OMS.assign_resource_to_observatory_org(resource_id=instDevice2_id, org_id=org_id)


        #test the extended resource
        extended_org = self.org_management_service.get_marine_facility_extension(org_id)
        #log.debug("test_observatory_org_extended: extended_org:  %s ", str(extended_org))
        self.assertEqual(1, len(extended_org.instruments_deployed) )
        self.assertEqual(1, len(extended_org.platforms_not_deployed) )
        self.assertEqual(0, len(extended_org.platform_models) )