def convert_attribute(self, attribute, value, value_type=None):
"""
Convert the attribute into a value that can be stored in the generated json file and properly
returned for verification against the alias default value
:param attribute: attribute name
:param value: attribute value
:param value_type: type of the attribute value
:return: converted value
"""
_method_name = 'convert_attribute'
self.__logger.entering(attribute, value, value_type, class_name=self.__class_name, method_name=_method_name)
if value is not None and '$Proxy' in str(type(value)):
if value.isProxyClass(ObjectName):
return_value = value.getKeyProperty('Name')
else:
return_value = value.toString()
elif value is None or value_type == alias_constants.PASSWORD or \
(value_type == alias_constants.STRING and (value == 'null' or value == 'none')):
return_value = 'None'
elif value is None or value == 'null' or value == 'none' \
or value_type == alias_constants.PASSWORD:
return_value = 'None'
elif not isinstance(value, basestring) and \
(value_type == alias_constants.BOOLEAN or value_type == alias_constants.JAVA_LANG_BOOLEAN):
if value:
return_value = Boolean.toString(Boolean.TRUE)
else:
return_value = Boolean.toString(Boolean.FALSE)
elif isinstance(value, (types.ListType, types.TupleType, PyArray)):
return_value = list()
for entry in value:
return_value.append(self.convert_attribute(attribute, entry, value_type))
elif value_type == alias_constants.OBJECT or isinstance(value, Object):
return_value = value.toString()
else:
return_value = value
self.__logger.exiting(class_name=self.__class_name, method_name=_method_name, result=return_value)
return return_value
def _format_json_value(value):
"""
Format the value as a JSON snippet.
:param value: the value
:return: the JSON snippet
"""
import java.lang.StringBuilder as StringBuilder
builder = StringBuilder()
if type(value) == bool or (isinstance(value, types.StringTypes) and (value == 'true' or value == 'false')):
builder.append(JBoolean.toString(value))
elif isinstance(value, types.StringTypes):
builder.append('"').append(_escape_text(value.strip())).append('"')
else:
builder.append(value)
return builder.toString()
def _format_json_value(value):
"""
Format the value as a JSON snippet.
:param value: the value
:return: the JSON snippet
"""
import java.lang.StringBuilder as StringBuilder
builder = StringBuilder()
if type(value) == bool or (type(value) == str and
(value == 'true' or value == 'false')):
builder.append(JBoolean.toString(value))
elif type(value) == str:
builder.append('"').append(_quote_embedded_quotes(value)).append('"')
else:
builder.append(value)
return builder.toString()
def __search(self):
requireEscape = False
recordsPerPage = self.__portal.recordsPerPage
uri = URLDecoder.decode(self.request.getAttribute("RequestURI"))
query = None
pagePath = self.__portal.getName() + "/" + self.pageName
if query is None or query == "":
query = self.formData.get("query")
requireEscape = True
if query is None or query == "":
query = "*:*"
if query == "*:*":
self.__query = ""
else:
self.__query = query
if requireEscape:
query = self.__escapeQuery(query)
query = "%s:%s" % (self.__searchField, query)
self.sessionState.set("query", self.__query)
# find objects with annotations matching the query
if query != "*:*":
anotarQuery = self.__query
if requireEscape:
anotarQuery = self.__escapeQuery(anotarQuery)
annoReq = SearchRequest(anotarQuery)
annoReq.setParam("facet", "false")
annoReq.setParam("rows", str(99999))
annoReq.setParam("sort", "dateCreated asc")
annoReq.setParam("start", str(0))
anotarOut = ByteArrayOutputStream()
self.services.indexer.annotateSearch(annoReq, anotarOut)
resultForAnotar = SolrResult(
ByteArrayInputStream(anotarOut.toByteArray()))
resultForAnotar = resultForAnotar.getResults()
ids = HashSet()
for annoDoc in resultForAnotar:
annotatesUri = annoDoc.getFirst("annotatesUri")
ids.add(annotatesUri)
self.log.debug("Found annotation for %s" % annotatesUri)
# add annotation ids to query
query += ' OR id:("' + '" OR "'.join(ids) + '")'
portalSearchQuery = self.__portal.searchQuery
if portalSearchQuery == "":
portalSearchQuery = query
else:
if query != "*:*":
query += " AND " + portalSearchQuery
else:
query = portalSearchQuery
req = SearchRequest(query)
req.setParam("facet", "true")
req.setParam("rows", str(recordsPerPage))
req.setParam("facet.field", self.__portal.facetFieldList)
req.setParam("facet.sort",
Boolean.toString(self.__portal.getFacetSort()))
req.setParam("facet.limit", str(self.__portal.facetCount))
req.setParam("sort", self.__sortBy)
# setup facets
if self.__useSessionNavigation:
action = self.formData.get("verb")
value = self.formData.get("value")
fq = self.sessionState.get("fq")
if fq is not None:
self.__pageNum = 1
req.setParam("fq", fq)
if action == "add_fq":
self.__pageNum = 1
req.addParam("fq", URLDecoder.decode(value, "UTF-8"))
elif action == "remove_fq":
self.__pageNum = 1
req.removeParam("fq", URLDecoder.decode(value, "UTF-8"))
elif action == "clear_fq":
self.__pageNum = 1
req.removeParam("fq")
elif action == "select-page":
self.__pageNum = int(value)
else:
navUri = uri[len(pagePath):]
self.__pageNum, fq, self.__fqParts = self.__parseUri(navUri)
savedfq = self.sessionState.get("savedfq")
limits = []
if savedfq:
limits.extend(savedfq)
if fq:
limits.extend(fq)
self.sessionState.set("savedfq", limits)
for q in fq:
req.addParam("fq", URLDecoder.decode(q, "UTF-8"))
portalQuery = self.__portal.query
if portalQuery:
req.addParam("fq", portalQuery)
req.addParam("fq", 'item_type:"object"')
if req.getParams("fq"):
self.__selected = ArrayList(req.getParams("fq"))
if self.__useSessionNavigation:
self.sessionState.set("fq", self.__selected)
self.sessionState.set("searchQuery", portalSearchQuery)
self.sessionState.set("pageNum", self.__pageNum)
# Make sure 'fq' has already been set in the session
if not self.page.authentication.is_admin():
current_user = self.page.authentication.get_username()
security_roles = self.page.authentication.get_roles_list()
security_filter = 'security_filter:("' + '" OR "'.join(
security_roles) + '")'
security_exceptions = 'security_exception:"' + current_user + '"'
owner_query = 'owner:"' + current_user + '"'
security_query = "(" + security_filter + ") OR (" + security_exceptions + ") OR (" + owner_query + ")"
req.addParam("fq", security_query)
## uncomment to ensure guest users not logged in cannot see alerts in browse page
# self.filterOutWorkflowStepForUnAuth(req, "inbox")
req.setParam("start", str((self.__pageNum - 1) * recordsPerPage))
self.log.debug(" * search.py: %s, page: %s" %
(req.toString(), self.__pageNum))
out = ByteArrayOutputStream()
self.services.indexer.search(req, out)
self.__result = SolrResult(ByteArrayInputStream(out.toByteArray()))
if self.__result is not None:
self.__paging = Pagination(self.__pageNum,
self.__result.getNumFound(),
self.__portal.recordsPerPage)
def __search(self):
requireEscape = False
recordsPerPage = self.__portal.recordsPerPage
uri = URLDecoder.decode(self.request.getAttribute("RequestURI"))
query = None
pagePath = self.__portal.getName() + "/" + self.pageName
if query is None or query == "":
query = self.formData.get("query")
requireEscape = True
if query is None or query == "":
query = "*:*"
if query == "*:*":
self.__query = ""
else:
self.__query = query
if requireEscape:
query = self.__escapeQuery(query)
query = "%s:%s" % (self.__searchField, query)
self.sessionState.set("query", self.__query)
# find objects with annotations matching the query
if query != "*:*":
anotarQuery = self.__query
if requireEscape:
anotarQuery = self.__escapeQuery(anotarQuery)
annoReq = SearchRequest(anotarQuery)
annoReq.setParam("facet", "false")
annoReq.setParam("rows", str(99999))
annoReq.setParam("sort", "dateCreated asc")
annoReq.setParam("start", str(0))
anotarOut = ByteArrayOutputStream()
self.services.indexer.annotateSearch(annoReq, anotarOut)
resultForAnotar = SolrResult(ByteArrayInputStream(anotarOut.toByteArray()))
resultForAnotar = resultForAnotar.getResults()
ids = HashSet()
for annoDoc in resultForAnotar:
annotatesUri = annoDoc.getFirst("annotatesUri")
ids.add(annotatesUri)
self.log.debug("Found annotation for %s" % annotatesUri)
# add annotation ids to query
query += ' OR id:("' + '" OR "'.join(ids) + '")'
portalSearchQuery = self.__portal.searchQuery
if portalSearchQuery == "":
portalSearchQuery = query
else:
if query != "*:*":
query += " AND " + portalSearchQuery
else:
query = portalSearchQuery
req = SearchRequest(query)
req.setParam("facet", "true")
req.setParam("rows", str(recordsPerPage))
req.setParam("facet.field", self.__portal.facetFieldList)
req.setParam("facet.sort", Boolean.toString(self.__portal.getFacetSort()))
req.setParam("facet.limit", str(self.__portal.facetCount))
req.setParam("sort", self.__sortBy)
# setup facets
if self.__useSessionNavigation:
action = self.formData.get("verb")
value = self.formData.get("value")
fq = self.sessionState.get("fq")
if fq is not None:
self.__pageNum = 1
req.setParam("fq", fq)
if action == "add_fq":
self.__pageNum = 1
req.addParam("fq", URLDecoder.decode(value, "UTF-8"))
elif action == "remove_fq":
self.__pageNum = 1
req.removeParam("fq", URLDecoder.decode(value, "UTF-8"))
elif action == "clear_fq":
self.__pageNum = 1
req.removeParam("fq")
elif action == "select-page":
self.__pageNum = int(value)
else:
navUri = uri[len(pagePath):]
self.__pageNum, fq, self.__fqParts = self.__parseUri(navUri)
savedfq = self.sessionState.get("savedfq")
limits = []
if savedfq:
limits.extend(savedfq)
if fq:
limits.extend(fq)
self.sessionState.set("savedfq", limits)
for q in fq:
req.addParam("fq", URLDecoder.decode(q, "UTF-8"))
portalQuery = self.__portal.query
if portalQuery:
req.addParam("fq", portalQuery)
req.addParam("fq", 'item_type:"object"')
if req.getParams("fq"):
self.__selected = ArrayList(req.getParams("fq"))
if self.__useSessionNavigation:
self.sessionState.set("fq", self.__selected)
self.sessionState.set("searchQuery", portalSearchQuery)
self.sessionState.set("pageNum", self.__pageNum)
# Make sure 'fq' has already been set in the session
if not self.page.authentication.is_admin():
current_user = self.page.authentication.get_username()
security_roles = self.page.authentication.get_roles_list()
security_filter = 'security_filter:("' + '" OR "'.join(security_roles) + '")'
security_exceptions = 'security_exception:"' + current_user + '"'
owner_query = 'owner:"' + current_user + '"'
security_query = "(" + security_filter + ") OR (" + security_exceptions + ") OR (" + owner_query + ")"
req.addParam("fq", security_query)
req.setParam("start", str((self.__pageNum - 1) * recordsPerPage))
#print " * search.py:", req.toString(), self.__pageNum
out = ByteArrayOutputStream()
self.services.indexer.search(req, out)
self.__result = SolrResult(ByteArrayInputStream(out.toByteArray()))
if self.__result is not None:
self.__paging = Pagination(self.__pageNum,
self.__result.getNumFound(),
self.__portal.recordsPerPage)
def useSingleYAxis():
''' use the same Y axis for all Y fields in the Scan Plot
'''
LocalProperties.set("gda.plot.ScanPlotSettings.separateYAxes",
Boolean.toString(False))
def useSeparateYAxes():
'''use separate Y axes for each Y field in the Scan Plot
'''
LocalProperties.set("gda.plot.ScanPlotSettings.separateYAxes",
Boolean.toString(True))
