Python getSequenceLength示例

示例#1

文件： dnaseqlib.py 项目： ujs/deeplearning

def compareSequences(getExactSubmatches, imgfile, imgsize, afile, bfile, k, m):
    a = kfasta.FastaSequence(afile)
    b = kfasta.FastaSequence(bfile)
    matches = getExactSubmatches(a, b, k, m)
    buildComparisonImage(imgfile, imgsize[0], imgsize[1],
                         kfasta.getSequenceLength(afile),
                         kfasta.getSequenceLength(bfile), matches)

示例#2

文件： dnaseqlib.py 项目： Supernovapsy/python

def compareSequences(getExactSubmatches, imgfile, imgsize, afile, bfile, k, m):
    a = kfasta.FastaSequence(afile)
    b = kfasta.FastaSequence(bfile)
    matches = getExactSubmatches(a, b, k, m)
    buildComparisonImage(
        imgfile, imgsize[0], imgsize[1], kfasta.getSequenceLength(afile), kfasta.getSequenceLength(bfile), matches
    )