def test_expand(query):
iri = expand(query[0], prefix_maps=None, fallback=True)
# get the IRI
assert iri == query[1]
# provide custom prefix_maps, with fallback
iri = expand(query[0],
prefix_maps=[{
'HGNC': 'https://identifiers.org/hgnc:'
}],
fallback=True)
# get the alternate IRI
assert iri == query[2]
# provide custom prefix_maps, but no fallback
iri = expand(query[0],
prefix_maps=[{
'hgnc': 'https://example.org/hgnc:'
}],
fallback=False)
# get back the CURIE
assert iri == query[0]
# provide no prefix_maps, and no fallback
iri = expand(query[0], prefix_maps=None, fallback=False)
# get the IRI
assert iri == query[1]
def test_expand(query):
"""
Test expand method for expanding a CURIE to an IRI.
"""
iri = expand(query[0], prefix_maps=None, fallback=True)
# get the IRI
assert iri == query[1]
# provide custom prefix_maps, with fallback
iri = expand(
query[0], prefix_maps=[{"HGNC": "https://identifiers.org/hgnc:"}], fallback=True
)
# get the alternate IRI
assert iri == query[2]
# provide custom prefix_maps, but no fallback
iri = expand(
query[0], prefix_maps=[{"hgnc": "https://example.org/hgnc:"}], fallback=False
)
# get back the CURIE
assert iri == query[0]
# provide no prefix_maps, and no fallback
iri = expand(query[0], prefix_maps=None, fallback=False)
# get the IRI
assert iri == query[1]
def expand(self, curie: str, fallback: bool = True) -> str:
"""
Expand a given CURIE to an URI, based on mappings from `prefix_map`.
Parameters
----------
curie: str
A CURIE
fallback: bool
Determines whether to fallback to default prefix mappings, as determined
by `prefixcommons.curie_util`, when CURIE prefix is not found in `prefix_map`.
Returns
-------
str
A URI corresponding to the CURIE
"""
uri = expand(curie, [self.prefix_map], fallback)
return uri