for line in IN_FILE:
if line[0] != "#":
a = line.strip().split("\t")
if len(a[0]) > 0:
if len(a) == 1:
a.append(a[0])
sys.stderr.write("%s %s \n" % (a[0], a[1]))
filename = a[0]
if len(a) == 3:
selectedcolor = a[2]
else:
selectedcolor = COLORS[n % len(COLORS)]
spectrum = loadfile(filename)
if spectrum != []:
plotme(spectrum, label=a[1], color=selectedcolor,
thresholdlist=listofthresholds,
numplots=numplots, dump=OPTS.dump, shaded=SHADED)
n = n + 1
if OPTS.suppresslegend == 0:
plt.legend(loc="upper left")
plt.savefig(OUTFILE)
else:
# for v in ARGS:
# print("#", v)
# filename = v
# spectrum = loadfile(filename)
# plotme(spectrum, filename, thresholdlist=listofthresholds,
# color=COLORS[n], dump=OPTS.dump, numplots=len(ARGS), shaded=SHADED)
# n = n + 1
# plt.legend(loc="upper left")
sys.stderr.write(
def test_plotmeS():
p = plotme(FIXTURE, "templabel", shaded=2, suppress=True)
p = plotme(FIXTURE2, "templabel", shaded=2, suppress=True)
def test_plotme4():
p = plotme(FIXTURE, "templabel", shaded=4)
p = plotme(FIXTURE2, "templabel", shaded=4)
def test_plotmeT():
p = plotme(FIXTURE, "templabel", shaded=2, thresholdlist=[1, 10, 100])
p = plotme(FIXTURE2, "templabel", shaded=2, thresholdlist=[1, 10, 100])
def test_plotmeD():
p = plotme(FIXTURE, "templabel", shaded=2, dump=True)
p = plotme(FIXTURE2, "templabel", shaded=2, dump=True)
a = line.strip().split("\t")
if len(a[0]) > 0:
if len(a) == 1:
a.append(a[0])
sys.stderr.write("%s %s \n" % (a[0], a[1]))
filename = a[0]
if len(a) == 3:
selectedcolor = a[2]
else:
selectedcolor = COLORS[n % len(COLORS)]
spectrum = loadfile(filename)
if spectrum != []:
plotme(spectrum,
label=a[1],
color=selectedcolor,
thresholdlist=listofthresholds,
numplots=numplots,
dump=OPTS.dump,
shaded=SHADED)
n = n + 1
if OPTS.suppresslegend == 0:
plt.legend(loc="upper left")
plt.savefig(OUTFILE)
else:
# for v in ARGS:
# print("#", v)
# filename = v
# spectrum = loadfile(filename)
# plotme(spectrum, filename, thresholdlist=listofthresholds,
# color=COLORS[n], dump=OPTS.dump, numplots=len(ARGS), shaded=SHADED)
# n = n + 1
