def testGlu(self):
try:
data2pdb.main(["-c", GLU_INI])
self.assertFalse(diff_lines(GLU_OUT, GOOD_GLU_OUT))
finally:
silent_remove(PDB_TPL_OUT)
silent_remove(GLU_OUT)
def testNotIni(self):
# gracefully fail if give the wrong file to the -c option
test_input = ["-c", NOT_INI]
if logger.isEnabledFor(logging.DEBUG):
main(test_input)
with capture_stderr(main, test_input) as output:
self.assertTrue("WARNING: File contains no section headers" in output)
def testGlu(self):
try:
data2pdb.main(["-c", GLU_INI])
self.assertFalse(diff_lines(GLU_OUT, GOOD_GLU_OUT))
finally:
silent_remove(PDB_TPL_OUT)
silent_remove(GLU_OUT)
def testNotIni(self):
# gracefully fail if give the wrong file to the -c option
test_input = ["-c", NOT_INI]
if logger.isEnabledFor(logging.DEBUG):
main(test_input)
with capture_stderr(main, test_input) as output:
self.assertTrue(
"WARNING: File contains no section headers" in output)
def testHelp(self):
test_input = ['-h']
if logger.isEnabledFor(logging.DEBUG):
main(test_input)
with capture_stderr(main, test_input) as output:
self.assertFalse(output)
with capture_stdout(main, test_input) as output:
self.assertTrue("optional arguments" in output)
def testHelp(self):
test_input = ['-h']
if logger.isEnabledFor(logging.DEBUG):
main(test_input)
with capture_stderr(main, test_input) as output:
self.assertFalse(output)
with capture_stdout(main, test_input) as output:
self.assertTrue("optional arguments" in output)
def testDefIni(self):
test_input = ["-c", DEF_INI]
if logger.isEnabledFor(logging.DEBUG):
main(test_input)
try:
main(test_input)
self.assertFalse(diff_lines(PDB_OUT, GOOD_PDB_OUT))
finally:
silent_remove(PDB_TPL_OUT)
silent_remove(PDB_OUT)
def testDefIni(self):
test_input = ["-c", DEF_INI]
if logger.isEnabledFor(logging.DEBUG):
main(test_input)
try:
main(test_input)
self.assertFalse(diff_lines(PDB_OUT, GOOD_PDB_OUT))
finally:
silent_remove(PDB_TPL_OUT)
silent_remove(PDB_OUT)
def testGluDict(self):
try:
data2pdb.main(["-c", GLU_DICT_INI])
self.assertFalse(diff_lines(GLU_OUT, GOOD_GLU_OUT))
with open(DEF_DICT_OUT, 'r') as d_file:
dict_test = json.load(d_file)
with open(GOOD_DICT, 'r') as d_file:
dict_good = json.load(d_file)
self.assertEqual(dict_test, dict_good)
finally:
silent_remove(PDB_TPL_OUT)
silent_remove(GLU_OUT)
silent_remove(DEF_DICT_OUT)
def testGluDict(self):
try:
data2pdb.main(["-c", GLU_DICT_INI])
self.assertFalse(diff_lines(GLU_OUT, GOOD_GLU_OUT))
with open(DEF_DICT_OUT, 'r') as d_file:
dict_test = json.load(d_file)
with open(GOOD_DICT, 'r') as d_file:
dict_good = json.load(d_file)
self.assertEqual(dict_test, dict_good)
finally:
silent_remove(PDB_TPL_OUT)
silent_remove(GLU_OUT)
silent_remove(DEF_DICT_OUT)
