def test_user(args):
from botocore.exceptions import ClientError
import boto3
account = get_iam_account(l, args, args.user_name)
if not account.access_key:
err("Can't test user {}; library does not have record for account ( by arn ) "
.format(args.user_name))
session = boto3.Session(aws_access_key_id=account.access_key,
aws_secret_access_key=account.secret)
root_s3 = get_resource(args, 's3')
s3 = session.resource('s3')
bn, prefix = split_bucket_name(args.bucket, default=None)
root_bucket = root_s3.Bucket(bn)
bucket = s3.Bucket(bn)
prefixes = [prefix] if prefix else TOP_LEVEL_DIRS
for prefix in prefixes:
k = prefix + '/test/' + args.user_name
rk = k + '-root'
ro = root_bucket.put_object(Key=rk, Body=args.user_name)
try:
o = bucket.Object(rk)
c = o.get()
read = True
except ClientError as e:
read = False
try:
o = bucket.put_object(Key=k, Body=args.user_name)
write = True
except ClientError as e:
write = False
try:
o.delete()
delete = True
except ClientError as e:
delete = False
#ro.delete()
prt("{:<35s} {:<5s} {:<5s} {:<6s} {}".format(
k, 'read' if read else '', 'write' if write else '',
'delete' if delete else '', 'no access' if not any(
(read, write, delete)) else ''))
def metatab_derived_handler(m, skip_if_exists=None):
"""Create local Zip, Excel and Filesystem packages
:param m:
:param skip_if_exists:
:return:
"""
from metatab.package import PackageError
create_list = []
url = None
doc = MetatabDoc(m.mt_file)
env = get_lib_module_dict(doc)
if (m.args.excel is not False or m.args.zip is not False or
(hasattr(m.args, 'filesystem') and m.args.filesystem is not False) ):
update_name(m.mt_file, fail_on_missing=False, report_unchanged=False)
if m.args.force:
skip_if_exists = False
try:
# Always create a filesystem package before ZIP or Excel, so we can use it as a source for
# data for the other packages. This means that Transform processes and programs only need
# to be run once.
if any([m.args.filesystem, m.args.excel, m.args.zip]):
_, url, created = make_filesystem_package(m.mt_file, m.cache, env, skip_if_exists)
create_list.append(('fs', url, created))
m.mt_file = url
env = {} # Don't need it anymore, since no more programs will be run.
if m.args.excel is not False:
_, url, created = make_excel_package(m.mt_file, m.cache, env, skip_if_exists)
create_list.append(('xlsx', url, created))
if m.args.zip is not False:
_, url, created = make_zip_package(m.mt_file, m.cache, env, skip_if_exists)
create_list.append(('zip', url, created))
if m.args.csv is not False:
_, url, created = make_csv_package(m.mt_file, m.cache, env, skip_if_exists)
create_list.append(('csv', url, created))
except PackageError as e:
err("Failed to generate package: {}".format(e))
return create_list
def package_info(doc):
client = dw.api_client()
username = '******'
title = doc.find_first_value("Root.Title")
key = join(username, slugify(title))
try:
ds = client.get_dataset(key)
prt(json.dumps(ds, indent=4))
except RestApiError as e:
err(e)
def metatab_query_handler(m):
if m.args.resource or m.args.head:
limit = 20 if m.args.head else None
try:
doc = MetatabDoc(m.mt_file, cache=m.cache)
except OSError as e:
err("Failed to open Metatab doc: {}".format(e))
return
if m.resource:
dump_resource(doc, m.resource, limit)
else:
dump_resources(doc)
def get_resource_urls(doc):
resources = {}
for dist in doc.find("Root.Distribution"):
package_url, metadata_url = resolve_package_metadata_url(dist.value)
u = Url(package_url)
if u.resource_format == 'zip':
prt("Skipping ZIP package ", package_url)
elif u.resource_format == 'xlsx':
resources[basename(package_url)] = package_url
prt("Adding XLS package ", package_url)
pass
elif u.resource_format == 'csv':
resources[basename(package_url)] = package_url
prt("Adding CSV package {}".format(basename(package_url)))
try:
p = open_package(package_url)
except (IOError, MetatabError) as e:
err("Failed to open package '{}' from reference '{}': {}".
format(package_url, dist.value, e))
for r in p.resources():
mimetype = mimetypes.guess_type(r.resolved_url)[0]
try:
ext = mimetypes.guess_extension(mimetype)[1:]
except:
ext = None
# '.csv': Data>world currently get the format from the name, not the URL
resources[r.name + '.csv'] = r.resolved_url
prt("Adding CSV resource {}".format(r.name))
else:
prt('Skipping {}'.format(package_url))
return resources
def metaworld():
import argparse
parser = argparse.ArgumentParser(
prog='metakan',
description='Publish packages to Data.World, version {}'.format(
_meta.__version__))
parser.add_argument('-i',
'--info',
default=False,
action='store_true',
help="Show package information")
parser.add_argument('metatabfile',
nargs='?',
default=DEFAULT_METATAB_FILE,
help='Path to a Metatab file')
class MetapackCliMemo(object):
def __init__(self, args):
self.cwd = getcwd()
self.args = args
self.cache = get_cache('metapack')
self.mtfile_arg = args.metatabfile if args.metatabfile else join(
self.cwd, DEFAULT_METATAB_FILE)
self.mtfile_url = Url(self.mtfile_arg)
self.resource = self.mtfile_url.parts.fragment
self.package_url, self.mt_file = resolve_package_metadata_url(
self.mtfile_url.rebuild_url(False, False))
m = MetapackCliMemo(parser.parse_args(sys.argv[1:]))
try:
doc = MetatabDoc(m.mt_file, cache=m.cache)
except (IOError, MetatabError) as e:
err("Failed to open metatab '{}': {}".format(m.mt_file, e))
if m.args.info:
package_info(doc)
else:
send_to_dw(doc)
exit(0)
def write(self, body, path, acl=None):
from botocore.exceptions import ClientError
import mimetypes
acl = acl if acl is not None else self._acl
#if isinstance(body, six.string_types):
# with open(body,'rb') as f:
# body = f.read()
key = join(self._prefix, path).strip('/')
try:
o = self._bucket.Object(key)
if o.content_length == len(body):
prt("File '{}' already in bucket; skipping".format(key))
return self.access_url(path)
else:
prt("File '{}' already in bucket, but length is different; re-wirtting"
.format(key))
except ClientError as e:
if int(e.response['Error']['Code']) in (403, 405):
err("S3 Access failed for '{}:{}': {}\nNOTE: With Docker, this error is often the result of container clock drift. Check your container clock. "
.format(self._bucket_name, key, e))
elif int(e.response['Error']['Code']) != 404:
err("S3 Access failed for '{}:{}': {}".format(
self._bucket_name, key, e))
ct = mimetypes.guess_type(key)[0]
try:
self._bucket.put_object(
Key=key,
Body=body,
ACL=acl,
ContentType=ct if ct else 'binary/octet-stream')
except Exception as e:
self.err("Failed to write '{}': {}".format(key, e))
return self.access_url(path)
def delete_user(args):
from botocore.exceptions import ClientError
client = get_client(args, 'iam')
try:
resource = get_resource(args, 'iam')
user = resource.User(args.user_name)
for key in user.access_keys.all():
prt("Deleting user key: {}".format(key))
key.delete()
for policy in user.policies.all():
prt("Deleting user policy: {}".format(policy.name))
policy.delete()
response = client.delete_user(UserName=args.user_name)
prt("Deleted user: {}".format(args.user_name))
except ClientError as e:
err("Could not delete user: {}".format(e))
def set_mt_arg(self, metatabfile):
self.mtfile_arg = metatabfile if metatabfile else join(
self.cwd, DEFAULT_METATAB_FILE)
self.mtfile_url = Url(self.mtfile_arg)
self.resource = self.mtfile_url.parts.fragment
self.package_url, self.mt_file = resolve_package_metadata_url(
self.mtfile_url.rebuild_url(False, False))
self.api_key = self.args.api or getenv('METAKAN_API_KEY')
self.ckan_url = self.args.ckan or getenv('METAKAN_CKAN_URL')
if not self.ckan_url:
err("Set the --ckan option or the METAKAN_CKAN_URL env var to set the URL of a ckan instance"
)
if not self.api_key:
err("Set the --api option METAKAN_API_KEY env var with the API key to a CKAN instance"
)
def metapack():
import argparse
parser = argparse.ArgumentParser(
prog='metapack',
description='Create and manipulate metatab data packages, version {}'.format(_meta.__version__))
parser.add_argument('metatabfile', nargs='?',
help="Path or URL to a metatab file. If not provided, defaults to 'metadata.csv' ")
parser.add_argument('-p', '--profile', help="Name of a BOTO or AWS credentails profile", required=False)
parser.add_argument('--exceptions', default=False, action='store_true',
help='Show full stack tract for some unhandled exceptions')
parser.set_defaults(handler=None)
##
## Build Group
build_group = parser.add_argument_group('Building Metatab Files', 'Build and manage a metatab file for a pacakge')
build_group.add_argument('-c', '--create', action='store', nargs='?', default=False,
help="Create a new metatab file, from named template. With no argument, uses the "
"'metatab' template ")
build_group.add_argument('-a', '--add', default=False,
help='Add a file or url to the resources. With a directory add a data files in the directory. '
'If given a URL to a web page, will add all links that point to CSV, Excel Files and'
'data files in ZIP files. (Caution: it will download and cache all of these files. )')
# build_group.add_argument('-S', '--scrape',
# help='Similar to --add, but scrape a web page for links to data files, documentation '
# 'and web pages and add the links as resources ')
# build_group.add_argument('-r', '--resources', default=False, action='store_true',
# help='Rebuild the resources, intuiting rows and encodings from the URLs')
build_group.add_argument('-s', '--schemas', default=False, action='store_true',
help='Rebuild the schemas for files referenced in the resource section')
build_group.add_argument('-d', '--datapackage', action='store_true', default=False,
help="Write a datapackage.json file adjacent to the metatab file")
build_group.add_argument('-u', '--update', action='store_true', default=False,
help="Update the Name from the Datasetname, Origin and Version terms")
build_group.add_argument('-F', '--force', action='store_true', default=False,
help='Force some operations, like updating the name and building packages')
##
## Derived Package Group
derived_group = parser.add_argument_group('Derived Packages', 'Generate other types of packages')
derived_group.add_argument('-e', '--excel', action='store_true', default=False,
help='Create an excel archive from a metatab file')
derived_group.add_argument('-z', '--zip', action='store_true', default=False,
help='Create a zip archive from a metatab file')
derived_group.add_argument('-f', '--filesystem', action='store_true', default=False,
help='Create a filesystem archive from a metatab file')
derived_group.add_argument('-v', '--csv', action='store_true', default=False,
help='Create a CSV archive from a metatab file')
##
## QueryPackage Group
query_group = parser.add_argument_group('Query', 'Return information and data from a package')
query_group.add_argument('-r', '--resource', default=False, action='store_true',
help='If the URL has no fragment, dump the resources listed in the metatab file.'
' With a fragment, dump a resource as a CSV')
query_group.add_argument('-H', '--head', default=False, action='store_true',
help="Dump the first 20 lines of a resource ")
##
## Administration Group
admin_group = parser.add_argument_group('Administration', 'Information and administration')
admin_group.add_argument('--clean-cache', default=False, action='store_true',
help="Clean the download cache")
admin_group.add_argument('-C', '--clean', default=False, action='store_true',
help="For some operations, like updating schemas, clear the section of existing terms first")
admin_group.add_argument('-i', '--info', default=False, action='store_true',
help="Show configuration information")
admin_group.add_argument('-n', '--name', default=False, action='store_true',
help="Print the name of the package")
admin_group.add_argument('-E', '--enumerate',
help='Enumerate the resources referenced from a URL. Does not alter the Metatab file')
admin_group.add_argument('--html', default=False, action='store_true',
help='Generate HTML documentation')
admin_group.add_argument('--markdown', default=False, action='store_true',
help='Generate Markdown documentation')
# cmd = parser.add_subparsers(title='Plugin Commands', help='Additional command supplied by plugins')
# load_plugins(cmd)
class MetapackCliMemo(object):
def __init__(self, args):
self.cwd = getcwd()
self.args = args
self.cache = get_cache('metapack')
if args.metatabfile and args.metatabfile.startswith('#'):
# It's just a fragment, default metatab file
args.metatabfile = join(self.cwd, DEFAULT_METATAB_FILE) + args.metatabfile
self.mtfile_arg = args.metatabfile if args.metatabfile else join(self.cwd, DEFAULT_METATAB_FILE)
self.mtfile_url = Url(self.mtfile_arg)
self.resource = self.mtfile_url.parts.fragment
self.package_url, self.mt_file = resolve_package_metadata_url(self.mtfile_url.rebuild_url(False, False))
m = MetapackCliMemo(parser.parse_args(sys.argv[1:]))
if m.args.info:
metatab_info(m.cache)
exit(0)
if m.args.profile:
from metatab.s3 import set_s3_profile
set_s3_profile(m.args.profile)
try:
for handler in (metatab_build_handler, metatab_derived_handler, metatab_query_handler, metatab_admin_handler):
handler(m)
except Exception as e:
if m.args.exceptions:
raise e
else:
err(e)
clean_cache(m.cache)
def metatab_build_handler(m):
if m.args.create is not False:
template = m.args.create if m.args.create else 'metatab'
if not exists(m.mt_file):
doc = make_metatab_file(template)
doc['Root']['Identifier'] = six.text_type(uuid4())
doc['Root']['Created'] = datetime_now()
write_doc(doc, m.mt_file)
prt('Created', m.mt_file)
else:
err('File', m.mt_file, 'already exists')
if m.args.add:
update_name(m.mt_file, fail_on_missing=False, report_unchanged=False)
add_resource(m.mt_file, m.args.add, cache=m.cache)
if False: # m.args.resources:
update_name(m.mt_file, fail_on_missing=False, report_unchanged=False)
doc = MetatabDoc(m.mt_file)
try:
doc['Schema'].clean()
except KeyError:
pass
for t in list(doc['Resources']): # w/o list(), will iterate over new terms
if not t.term_is('root.datafile'):
continue
if t.as_dict().get('url'):
add_resource(doc, t.as_dict()['url'], m.cache)
else:
warn("Entry '{}' on row {} is missing a url; skipping".format(t.join, t.row))
write_doc(doc, m.mt_file)
if m.args.schemas:
update_name(m.mt_file, fail_on_missing=False, report_unchanged=False)
process_schemas(m.mt_file, cache=m.cache, clean=m.args.clean)
if m.args.datapackage:
update_name(m.mt_file, fail_on_missing=False, report_unchanged=False)
from metatab.datapackage import convert_to_datapackage
doc = MetatabDoc(m.mt_file)
u = Url(m.mt_file)
if u.proto == 'file':
dpj_file = join(dirname(abspath(u.parts.path)), 'datapackage.json')
else:
dpj_file = join(getcwd(), 'datapackage.json')
try:
with open(dpj_file, 'w') as f:
f.write(json.dumps(convert_to_datapackage(doc), indent=4))
except ConversionError as e:
err(e)
if m.mtfile_url.scheme == 'file' and m.args.update:
update_name(m.mt_file, fail_on_missing=True, force=m.args.force)
def metatab():
import argparse
parser = argparse.ArgumentParser(
prog='metatab',
description='Matatab file parser, version {}'.format(_meta.__version__))
parser.add_argument('-C', '--clean-cache', default=False, action='store_true',
help="Clean the download cache")
g = parser.add_mutually_exclusive_group(required=True)
g.add_argument('-i', '--info', default=False, action='store_true',
help="Show configuration information")
g.add_argument('-c', '--create', action='store', nargs='?', default=False,
help="Create a new metatab file, from named template. With no argument, uses the 'metatab' template ")
g.add_argument('-t', '--terms', default=False, action='store_true',
help='Parse a file and print out the stream of terms, before interpretation')
g.add_argument('-I', '--interp', default=False, action='store_true',
help='Parse a file and print out the stream of terms, after interpretation')
g.add_argument('-j', '--json', default=False, action='store_true',
help='Parse a file and print out a JSON representation')
g.add_argument('-y', '--yaml', default=False, action='store_true',
help='Parse a file and print out a YAML representation')
g.add_argument('-R', '--resource', default=False, action='store_true',
help='If the URL has no fragment, dump the resources listed in the metatab file. With a fragment, dump a resource as a CSV')
g.add_argument('-H', '--head', default=False, action='store_true',
help="Dump the first 20 lines of a resoruce ")
g.add_argument('-S', '--schema',
help='Dump the schema for one named resource')
parser.add_argument('-d', '--show-declaration', default=False, action='store_true',
help='Parse a declaration file and print out declaration dict. Use -j or -y for the format')
parser.add_argument('-D', '--declare', help='Parse and incorporate a declaration before parsing the file.' +
' (Adds the declaration to the start of the file as the first term. )')
parser.add_argument('file', nargs='?', default=DEFAULT_METATAB_FILE, help='Path to a Metatab file')
args = parser.parse_args(sys.argv[1:])
# Specing a fragment screws up setting the default metadata file name
if args.file.startswith('#'):
args.file = DEFAULT_METATAB_FILE + args.file
cache = get_cache('metapack')
if args.info:
prt('Version : {}'.format(_meta.__version__))
prt('Cache dir: {}'.format(str(cache.getsyspath('/'))))
exit(0)
if args.clean_cache:
clean_cache(cache)
if args.create is not False:
new_metatab_file(args.file, args.create)
exit(0)
if args.resource or args.head:
limit = 20 if args.head else None
u = Url(args.file)
resource = u.parts.fragment
metadata_url = u.rebuild_url(False, False)
package_url, metadata_url = resolve_package_metadata_url(metadata_url)
try:
doc = MetatabDoc(metadata_url, cache=cache)
except OSError as e:
err("Failed to open Metatab doc: {}".format(e))
return # Never reached
if resource:
dump_resource(doc, resource, limit)
else:
dump_resources(doc)
exit(0)
if args.show_declaration:
doc = MetatabDoc()
doc.load_declarations([args.file])
print(json.dumps({
'terms': doc.decl_terms,
'sections': doc.decl_sections
}, indent=4))
exit(0)
else:
package_url, metadata_url = resolve_package_metadata_url(args.file)
try:
doc = MetatabDoc(metadata_url, cache=cache)
except IOError as e:
raise
err("Failed to open '{}': {}".format(metadata_url, e))
if args.terms:
for t in doc._term_parser:
print(t)
elif args.json:
print(json.dumps(doc.as_dict(), indent=4))
elif args.yaml:
import yaml
print(yaml.safe_dump(doc.as_dict(), default_flow_style=False, indent=4))
elif args.schema:
dump_schema(doc, args.schema)
exit(0)
def create_packages(m, second_stage_mtfile, distupdated=None):
""" Create Excel, ZIP, FS and CSV packages for upload to S3
:param m: CLI Arguments object
:param second_stage_mtfile: Path to a Metatab file, which must have distribution entries
:param skip_if_exists: If True, don't recreate the file if exists.
:return:
"""
create_list = []
url = None
doc = MetatabDoc(second_stage_mtfile)
access_value = doc.find_first_value('Root.Access')
if access_value == 'private':
acl = 'private'
else:
acl = 'public-read'
# Only the first Filesystem nees an env; the others won't need to run processing, since they
# are building from processed files.
env = {}
s3 = S3Bucket(m.args.s3, acl=acl, profile=m.args.profile)
urls = []
if (m.args.excel is not False or m.args.zip is not False or
(hasattr(m.args, 'filesystem') and m.args.filesystem is not False)):
update_name(m.mt_file, fail_on_missing=False, report_unchanged=False)
if m.args.force or distupdated is True:
skip_if_exists = False
else:
skip_if_exists = True
try:
# Always create a filesystem package before ZIP or Excel, so we can use it as a source for
# data for the other packages. This means that Transform processes and programs only need
# to be run once.
_, third_stage_mtfile, created = make_filesystem_package(
second_stage_mtfile, m.cache, get_lib_module_dict(doc),
skip_if_exists)
if m.args.excel is not False:
_, ex_url, created = make_excel_package(third_stage_mtfile,
m.cache, env,
skip_if_exists)
with open(ex_url, mode='rb') as f:
urls.append(('excel', s3.write(f.read(), basename(ex_url),
acl)))
if m.args.zip is not False:
_, zip_url, created = make_zip_package(third_stage_mtfile, m.cache,
env, skip_if_exists)
with open(zip_url, mode='rb') as f:
urls.append(('zip', s3.write(f.read(), basename(zip_url),
acl)))
# Note! This is a FileSystem package on the remote S3 bucket, not locally
if m.args.fs is not False:
try:
fs_p, fs_url, created = make_s3_package(
third_stage_mtfile, m.args.s3, m.cache, env, acl,
skip_if_exists)
except NoCredentialsError:
print(getenv('AWS_SECRET_ACCESS_KEY'))
err("Failed to find boto credentials for S3. "
"See http://boto3.readthedocs.io/en/latest/guide/configuration.html "
)
urls.append(('fs', fs_url))
# Make the CSV package from the filesystem package on S3; this will ensure that the
# package's resource URLs point to the S3 objects
if m.args.csv is not False:
# Using the signed url in case the bucket is private
p = CsvPackage(fs_p.access_url, cache=m.tmp_cache)
csv_url = p.save(PACKAGE_PREFIX)
with open(csv_url, mode='rb') as f:
urls.append(('csv', s3.write(f.read(), basename(csv_url),
acl)))
except PackageError as e:
err("Failed to generate package: {}".format(e))
return urls
def metasync():
import argparse
parser = argparse.ArgumentParser(
prog='metasync',
description='Create packages and store them in s3 buckets, version {}'.
format(_meta.__version__),
)
parser.add_argument('-i',
'--info',
default=False,
action='store_true',
help="Show configuration information")
parser.add_argument('-v',
'--verbose',
default=False,
action='store_true',
help="For some command, be more verbose")
parser.add_argument(
'-F',
'--force',
action='store_true',
default=False,
help='Force building packages, even when they already exist')
parser.add_argument('-p',
'--profile',
help="Name of a BOTO or AWS credentails profile",
required=False)
parser.add_argument('-s',
'--s3',
help="URL to S3 where packages will be stored",
required=False)
parser.add_argument('-S',
'--all-s3',
help="Synonym for `metasync -c -e -f -z -s <url>`",
required=False)
parser.add_argument(
'-e',
'--excel',
action='store_true',
default=False,
help='Create an excel package from a metatab file and copy it to S3. ')
parser.add_argument(
'-z',
'--zip',
action='store_true',
default=False,
help='Create a zip package from a metatab file and copy it to S3. ')
parser.add_argument(
'-c',
'--csv',
action='store_true',
default=False,
help=
'Create a csv package from a metatab file and copy it to S3. Requires building a file system package'
)
parser.add_argument(
'-f',
'--fs',
action='store_true',
default=False,
help=
'Create a Filesystem package. Unlike -e and -f, only writes the package to S3.'
)
parser.add_argument('-D',
'--docker',
help="Re-run the metasync command through docker",
action='store_true',
default=False)
parser.add_argument(
'-C',
'--credentials',
help="Show S3 Credentials and exit. "
"Eval this string to setup credentials in other shells.",
action='store_true',
default=False)
parser.add_argument('metatabfile',
nargs='?',
help='Path to a Metatab file')
class MetapackCliMemo(object):
def __init__(self, raw_args):
self.cwd = getcwd()
self.raw_args = raw_args
self.args = parser.parse_args(self.raw_args[1:])
self.cache = get_cache('metapack')
# This one is for loading packages that have just been
# written to S3.
self.tmp_cache = get_cache('temp')
clean_cache(self.tmp_cache)
if self.args.all_s3:
self.args.s3 = self.args.all_s3
self.args.excel = True
self.args.zip = True
self.args.csv = True
self.args.fs = True
self.mtfile_arg = self.args.metatabfile if self.args.metatabfile else join(
self.cwd, DEFAULT_METATAB_FILE)
self.mtfile_url = Url(self.mtfile_arg)
self.resource = self.mtfile_url.parts.fragment
self.package_url, self.mt_file = resolve_package_metadata_url(
self.mtfile_url.rebuild_url(False, False))
self.args.fs = self.args.csv or self.args.fs
m = MetapackCliMemo(sys.argv)
if m.args.credentials:
show_credentials(m.args.profile)
exit(0)
if m.args.docker:
run_docker(m)
if m.args.info:
metatab_info(m.cache)
exit(0)
if not m.args.s3:
doc = MetatabDoc(m.mt_file)
m.args.s3 = doc['Root'].find_first_value('Root.S3')
if not m.args.s3:
err("Must specify either -S or -s")
if m.args.excel is not False or m.args.zip is not False or m.args.fs is not False:
update_name(m.mt_file, fail_on_missing=False, report_unchanged=False)
doc = MetatabDoc(m.mt_file)
doc['Root'].get_or_new_term('Root.S3', m.args.s3)
write_doc(doc, m.mt_file)
second_stage_mtfile, distupdated = update_distributions(m)
if second_stage_mtfile != m.mt_file:
prt("Building packages from: ", second_stage_mtfile)
created = create_packages(m, second_stage_mtfile, distupdated=distupdated)
prt("Synchronized these Package Urls")
prt(tabulate(created))
exit(0)
from os.path import join, basename
from metatab import _meta, DEFAULT_METATAB_FILE, resolve_package_metadata_url, MetatabDoc, MetatabError, open_package
from metatab.cli.core import err
from rowgenerators import get_cache, Url
from .core import prt
from metatab.util import slugify
import json
import mimetypes
try:
import datadotworld as dw
from datadotworld.client.api import RestApiError
except ImportError:
err("To run the Metataworld importer, you must first install the datadotworld package. See https://github.com/datadotworld/data.world-py"
)
def metaworld():
import argparse
parser = argparse.ArgumentParser(
prog='metakan',
description='Publish packages to Data.World, version {}'.format(
_meta.__version__))
parser.add_argument('-i',
'--info',
default=False,
action='store_true',
help="Show package information")
def send_to_ckan(m):
from ckanapi import RemoteCKAN, NotFound
try:
doc = MetatabDoc(m.mt_file, cache=m.cache)
except (IOError, MetatabError) as e:
err("Failed to open metatab '{}': {}".format(m.mt_file, e))
c = RemoteCKAN(m.ckan_url, apikey=m.api_key)
ckanid = doc.find_first_value('Root.Ckanid')
identifier = doc.find_first_value('Root.Identitfier')
name = doc.find_first('Root.Name')
ckan_name = name.value.replace('.', '-')
id_name = ckanid or ckan_name
try:
pkg = c.action.package_show(name_or_id=id_name)
prt("Updating CKAN dataset for '{}'".format(ckan_name))
except NotFound:
pkg = c.action.package_create(name=ckan_name, package_id=identifier)
prt("Adding CKAN dataset for '{}'".format(ckan_name))
pkg['title'] = doc.find_first_value('Root.Title')
if not pkg['title']:
pkg['title'] = doc.find_first_value('Root.Description')
try:
pkg['notes'] = doc.markdown #doc.find_first_value('Root.Description')
except OSError as e:
warn(e)
pkg['version'] = name.properties.get('version')
pkg['groups'] = [{'name': g.value} for g in doc['Root'].find('Root.Group')]
pkg['tags'] = [{'name': g.value} for g in doc['Root'].find('Root.Tag')]
def get_org(name):
if not name:
return None
try:
return
except NotFound:
return None
org_name = name.get('Origin', doc['Root'].find_first_value('Root.CkanOrg'))
if org_name:
org_name_slug = org_name.value.replace('.', '-')
try:
owner_org = c.action.organization_show(id=org_name_slug).get('id')
pkg['owner_org'] = owner_org
except NotFound:
warn("Didn't find org for '{}'; not setting organization ".format(
org_name_slug))
org_name_slug = None
else:
org_name_slug = None
extras = {}
for t in doc.find('*.*', section='Root'):
if not t.term_is('Root.Distribution'):
extras[t.qualified_term] = t.value
for t in name.children:
extras[t.qualified_term] = t.value
pkg['extras'] = [{'key': k, 'value': v} for k, v in extras.items()]
resources = []
for dist in doc.find("Root.Distribution"):
package_url, metadata_url = resolve_package_metadata_url(dist.value)
u = Url(package_url)
if u.resource_format == 'zip':
d = dict(url=package_url,
name=basename(package_url),
format='ZIP',
mimetype=mimetypes.guess_type(package_url)[0],
description='ZIP version of package')
resources.append(d)
prt("Adding ZIP package ", d['name'])
elif u.resource_format == 'xlsx':
d = dict(url=package_url,
name=basename(package_url),
format='XLSX',
mimetype=mimetypes.guess_type(package_url)[0],
description='Excel version of package')
resources.append(d)
prt("Adding XLS package ", d['name'])
elif u.resource_format == 'csv':
d = dict(url=package_url,
name=basename(package_url),
format='csv',
mimetype=mimetypes.guess_type(metadata_url)[0],
description='CSV Package Metadata in Metatab format')
resources.append(d)
prt("Adding {} package {}".format(d['format'], d['name']))
try:
p = open_package(package_url)
except (IOError, MetatabError) as e:
err("Failed to open package '{}' from reference '{}': {}".
format(package_url, dist.value, e))
for r in p.resources():
mimetype = mimetypes.guess_type(r.resolved_url)[0]
try:
ext = mimetypes.guess_extension(mimetype)[1:]
except:
ext = None
d = dict(name=r.name,
format=ext,
url=r.resolved_url,
mimetype=mimetype,
description=r.markdown)
resources.append(d)
prt("Adding {} resource {}".format(d['format'], d['name']))
pkg['resources'] = resources
c.action.package_update(**pkg)
pkg = c.action.package_show(name_or_id=ckan_name)
update_dist(doc, [], join(m.ckan_url, 'dataset', ckan_name))
##
## Add a term with CKAN info.
doc['Root'].get_or_new_term('CkanId', pkg['id'])
if org_name_slug is None and pkg.get('organization'):
doc['Root'].get_or_new_term('CkanOrg', (pkg.get('organization')
or {}).get('name'))
groups = doc['Root'].find('Group')
for g in groups:
doc.remove_term(g)
for group in pkg.get('groups', []):
doc['Root'].new_term('Group', group['name'])
write_doc(doc, m.mt_file)