print("Cannot read video file")
sys.exit()
counter = 0
startTime = datetime.now()
cv2.destroyAllWindows()
# From warp.py
# fgbg1 = cv2.createBackgroundSubtractorMOG2(history=5000, varThreshold=20, detectShadows=False)
# fgbg2 = cv2.createBackgroundSubtractorMOG2(history=5000, varThreshold=100)
fgbg3 = cv2.createBackgroundSubtractorKNN(history=5000, dist2Threshold=250)
for_er = cv2.getStructuringElement(cv2.MORPH_ELLIPSE, (3, 3))
for_di = cv2.getStructuringElement(cv2.MORPH_ELLIPSE, (7, 7))
info = [
methods.CompileInformation("name_video", video_name),
methods.CompileInformation("local_creation", local_creation),
methods.CompileInformation("creation", creation),
methods.CompileInformation("length_vid", length_vid),
methods.CompileInformation("fps", fps),
methods.CompileInformation("vid_duration", vid_duration),
methods.CompileInformation("target_frame", target_frame),
methods.CompileInformation("side", side),
methods.CompileInformation("conversion", conversion)
]
info_video = {}
for i in info:
info_video[i.name] = i.value
start, end, step, _, _ = methods.frame_to_time(info_video)
if key == ord("q"):
# print("Q - key pressed. Window quit by user")
break
cv2.destroyAllWindows()
M, side, vertices_draw, IM, conversion = methods.calc_proj(vertices)
center = (0, 0)
mini = np.amin(vertices_draw, axis=0)
maxi = np.amax(vertices_draw, axis=0)
img = cv2.imread(args["image"])
img = cv2.resize(img, dsize=(0, 0), fx=0.5, fy=0.5)
img = cv2.warpPerspective(img, M, (side, side))
info = [methods.CompileInformation("name_image", image_name),
methods.CompileInformation("image_dimx", height),
methods.CompileInformation("image_dimy", width),
methods.CompileInformation("image_dimz", channels),
methods.CompileInformation("conversion", conversion),
methods.CompileInformation("side", side)]
info_image = {}
for i in info:
info_image[i.name] = i.value
if create_new_file:
print("There is not burrows map file for this video, creating one.")
head_true = True
name_result_file = image_path + "/" + "_burrows_map_" + sampling_time + ".csv"
# species = str(input("* Please enter species name for this individual: "))
# sex = str(input("* Please enter sex for this individual: "))
# handedness = str(input(" *Please enter handedness for this individual: "))
except ValueError:
print("Error in input. Using pre-defined information")
name = video_name + "_" + methods.random_name()
# species = "unknown"
# sex = "unknown"
# handedness = "unknown"
else:
name = video_name + "_" + methods.random_name()
# species = "unknown"
# sex = "unknown"
# handedness = "unknown"
info = [methods.CompileInformation("name_video", video_name),
methods.CompileInformation("local_creation", local_creation),
methods.CompileInformation("creation", creation),
methods.CompileInformation("length_vid", length_vid),
methods.CompileInformation("fps", fps),
methods.CompileInformation("vid_duration", vid_duration),
methods.CompileInformation("target_frame", target_frame),
methods.CompileInformation("side", (width, height, side)),
methods.CompileInformation("conversion", conversion),
methods.CompileInformation("tracker", "Manual_tracking"),
methods.CompileInformation("Crab_ID", name)]
info_video = {}
for i in info:
info_video[i.name] = i.value
# area = width_m * height_m
size = dist * new_conversion
print('\n'
'Measure capture:', '\n'
'Starting point', coord[0], '\n'
'Ending point', coord[1])
print('Lenght in pixels = ', round(dist, 2))
print('Pixel to centimeter conversion factor = ',
round(new_conversion, 2))
# print('Width of field of view in meters = ', width_m)
# print('Height of field of view in meters = ', height_m)
# print('Area of field of view in square meters = ', area)
print('Size in cm = ', round(size, 2))
info = [
methods.CompileInformation("frame_number", selected_f),
methods.CompileInformation("coordinate_0", coord[0]),
methods.CompileInformation("coordinate_1", coord[1]),
methods.CompileInformation("length_pixels", dist),
methods.CompileInformation("conversion_factor",
new_conversion),
methods.CompileInformation("length_cm", size)
]
info_video = {}
for i in info:
info_video[i.name] = i.value
save_measures(args["video"], info_video, False)
# break
print("Radius {}".format(radius))
# cv2.circle(img, (int((xi + x) / 2), int((yi + y) / 2)), radius, (0, 0, 255), 1)
draw = False
fgbg1 = cv2.createBackgroundSubtractorMOG2(history=5000, varThreshold=20)
fgbg2 = cv2.createBackgroundSubtractorMOG2(history=5000, varThreshold=100)
fgbg3 = cv2.createBackgroundSubtractorKNN(history=5000, dist2Threshold=250)
for_er = cv2.getStructuringElement(cv2.MORPH_ELLIPSE, constant.ERODE)
for_di = cv2.getStructuringElement(cv2.MORPH_ELLIPSE, constant.DILATE)
info = [
methods.CompileInformation("name_video", video_name),
methods.CompileInformation("local_creation", local_creation),
methods.CompileInformation("creation", creation),
methods.CompileInformation("length_vid", length_vid),
methods.CompileInformation("fps", fps),
methods.CompileInformation("vid_duration", vid_duration),
methods.CompileInformation("target_frame", target_frame),
methods.CompileInformation("side", (width, height, side)),
methods.CompileInformation("conversion", conversion),
methods.CompileInformation("tracker", "Manual_tracking"),
methods.CompileInformation("Crab_ID", None)
]
info_video = {}
for i in info:
info_video[i.name] = i.value
video_name = "GP010016"
name = "testing"
# try:
# name = video_name + "_" + str(input("* Please enter name for this individual: "))
# # species = str(input("* Please enter species name for this individual: "))
# # sex = str(input("* Please enter sex for this individual: "))
# # handedness = str(input(" *Please enter handedness for this individual: "))
# except ValueError:
# print("Error in input. Using pre-defined information")
# name = video_name + "_" + methods.random_name()
print("I have given you a name. Your name is ", name)
info = [
methods.CompileInformation("name_video", video_name),
methods.CompileInformation("local_creation", "local_creation"),
methods.CompileInformation("creation", "creation"),
methods.CompileInformation("length_vid", "length_vid"),
methods.CompileInformation("fps", "fps"),
methods.CompileInformation("vid_duration", "vid_duration"),
methods.CompileInformation("target_frame", "target_frame"),
methods.CompileInformation("side", "side"),
methods.CompileInformation("conversion", "conversion"),
methods.CompileInformation("tracker", "str(tracker)"),
methods.CompileInformation("Crab_ID", name)
]
info_video = {}
for i in info:
info_video[i.name] = i.value