def run_nn_opt():
kfold = KFold(n_splits=5, shuffle=True, random_state=1)
processor = P1()
datasets = [Diabetes()]
# 'random_hill_climb', 'simulated_annealing', 'genetic_alg'
estimators = [
Config(name='NN_%s' % title('random_hill_climb'),
estimator=mlrose.NeuralNetwork(
algorithm='random_hill_climb',
random_state=1,
max_iters=200,
hidden_nodes=[64],
early_stopping=True,
),
cv=kfold,
params={'restarts': [0, 10, 20, 30, 40, 50]}),
Config(name='NN_%s' % title('simulated_annealing'),
estimator=mlrose.NeuralNetwork(
algorithm='simulated_annealing',
random_state=1,
max_iters=200,
hidden_nodes=[64],
early_stopping=True,
),
cv=kfold,
params={'max_iters': [200]}),
Config(name='NN_%s' % title('genetic_alg'),
estimator=mlrose.NeuralNetwork(
algorithm='genetic_alg',
random_state=1,
max_iters=200,
hidden_nodes=[64],
early_stopping=True,
),
cv=kfold,
params={
'pop_size': [100, 200, 300, 400, 500, 600, 700, 800, 900],
'mutation_prob':
[0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9]
}),
]
for dataset in datasets:
for estimator in estimators:
estimator = processor.get_default_model(dataset=dataset,
estimator=estimator)
processor.process_validations(dataset=dataset, estimator=estimator)
processor.plot_validation()
for dataset in datasets:
for estimator in estimators:
estimator = processor.get_default_model(dataset=dataset,
estimator=estimator)
processor.param_selection(dataset=dataset, estimator=estimator)
processor.print_best_params()
for dataset in datasets:
for estimator in estimators:
processor.process(dataset=dataset, estimator=estimator)
processor.plot_learning_curves()
def neural_network_final_results():
x_train, y_train = load_data('dataset1', 'train')
x_test, y_test = load_data('dataset1', 'test')
algorithm = 'random_hill_climb'
rhc = mlr.NeuralNetwork(hidden_nodes = [10,10], activation = 'relu', \
algorithm = algorithm, max_iters=5000, restarts=5, \
bias = True, is_classifier = True, learning_rate = 0.1, \
early_stopping = True, clip_max = 1, max_attempts = 100, \
random_state = RANDOM_STATE, curve=True)
print('Random Hill Climbing')
start_time = time.time()
rhc.fit(x_train, y_train)
end_time = time.time()
total_time = end_time - start_time
print("Fit Time", total_time)
y_pred = rhc.predict(x_test)
test_accuracy = accuracy_score(y_test, y_pred)
print('Accuracy', test_accuracy)
algorithm = 'simulated_annealing'
sa = mlr.NeuralNetwork(hidden_nodes = [10,10], activation = 'relu', \
algorithm = algorithm, max_iters=5000, \
bias = True, is_classifier = True, learning_rate = 0.1, \
early_stopping = True, clip_max = 1, max_attempts = 100, \
random_state = RANDOM_STATE, curve=True)
print('Simulated Annealing')
start_time = time.time()
sa.fit(x_train, y_train)
end_time = time.time()
total_time = end_time - start_time
print("Fit Time", total_time)
y_pred = sa.predict(x_test)
test_accuracy = accuracy_score(y_test, y_pred)
print('Accuracy', test_accuracy)
algorithm = 'genetic_alg'
ga = mlr.NeuralNetwork(hidden_nodes = [10,10], activation = 'relu', \
algorithm = algorithm, max_iters=1000, pop_size = 500, \
bias = True, is_classifier = True, learning_rate = 0.1, \
early_stopping = True, clip_max = 1, max_attempts = 100, \
random_state = RANDOM_STATE, curve=True)
print('Genetic Algorithm')
start_time = time.time()
ga.fit(x_train, y_train)
end_time = time.time()
total_time = end_time - start_time
print("Fit Time", total_time)
y_pred = ga.predict(x_test)
test_accuracy = accuracy_score(y_test, y_pred)
print('Accuracy', test_accuracy)
def NN_SA(file_name, classifier_col):
X_train, X_test, y_train, y_test = util.data_load(file_name, classifier_col)
# SA HPs
nodes = [128, 128, 128, 128]
act = 'relu'
seed = 1
sa_algo = 'simulated_annealing'
sa_lr = 10
sa_iter = 10000
sa_temp = 10000
sa_decay = 0.92
sa_ma = 50
sa_clip = 10
temperature = [0.1, 1, 10, 100, 1000, 10000]
plt.figure()
for t in temperature:
print('temperature', t)
sa_nn_model = mlrose.NeuralNetwork(hidden_nodes=nodes, activation=act, random_state=seed, bias=True,
is_classifier=True, early_stopping=True, curve=True, algorithm=sa_algo,
max_iters=sa_iter, learning_rate=sa_lr, clip_max=sa_clip, max_attempts=sa_ma,
schedule=mlrose.GeomDecay(init_temp=t, decay=sa_decay))
sa_nn_model.fit(X_train, y_train)
plt.plot(sa_nn_model.fitness_curve, label='temp =' + str(t))
plt.title("NN SA - Temperature")
plt.xlabel('Iterations')
plt.ylabel('Loss')
plt.grid(True)
plt.legend()
plt.savefig("Images\\NN - SA - Temperature")
plt.xscale('log')
plt.savefig("Images\\NN - SA - Temperature - log")
plt.show()
decay_rates = [0.1, 0.2, 0.3, 0.4, 0.5, 0.8, 0.92]
plt.figure()
for dr in decay_rates:
print('decay', dr)
sa_nn_model = mlrose.NeuralNetwork(hidden_nodes=nodes, activation=act, random_state=seed, bias=True,
is_classifier=True, early_stopping=True, curve=True, algorithm=sa_algo,
max_iters=sa_iter, learning_rate=sa_lr, clip_max=sa_clip, max_attempts=sa_ma,
schedule=mlrose.GeomDecay(init_temp=sa_temp, decay=dr))
sa_nn_model.fit(X_train, y_train)
plt.plot(sa_nn_model.fitness_curve, label='decay rate =' + str(dr))
plt.title("NN SA - Decay Rate")
plt.xlabel('Iterations')
plt.ylabel('Loss')
plt.grid(True)
plt.legend()
plt.savefig("Images\\NN - SA - Decay Rate")
plt.xscale('log')
plt.savefig("Images\\NN - SA - Decay Rate - log")
plt.show()
def sa(self):
iteration = self.noOfiteration
problem_size_space = self.problem_size
step = problem_size_space // 2
# temperature_list=[1, 10, 50, 100, 250, 500, 1000, 2500, 5000, 10000]
temperature_list = [1, 10, 50]
# sa_params = { 'hidden_nodes': [(3,), (4,), (5,), (5, 5)],
sa_params = {
'hidden_nodes': [(3, ), (5, ), (5, 5), (10, 10, 10), (5, 5, 5)],
#(10, 10), (5, 5, 5), (10, 10, 10), (20, 20, 20)]
'max_iters': [x for x in range(0, iteration + 1, 1000)],
'schedule': [
mlrose.GeomDecay(init_temp=init_temp)
for init_temp in temperature_list
],
'learning_rate': [0.001, 0.01, 0.1],
'activation': ['tanh', 'relu', 'sigmoid']
}
sa_model = mlrose.NeuralNetwork(random_state=1,
algorithm='simulated_annealing',
bias=False,
is_classifier=True,
learning_rate=0.001,
early_stopping=True,
clip_max=5,
max_attempts=5000,
curve=True)
return sa_model, sa_params
def ga(self):
iteration = self.noOfiteration
problem_size_space = self.problem_size
problem_size_space_exp = problem_size_space * 10
step = problem_size_space_exp // 2
# ga_params = { 'hidden_nodes': [(3,), (4,), (5,), (5, 5)],
ga_params = {
'hidden_nodes': [(3, ), (5, 5), (10, 10, 10)],
#(10, 10), (5, 5, 5), (10, 10, 10), (20, 20, 20)]
'max_iters': [x for x in range(0, iteration + 1, 1000)],
'pop_size':
[x for x in range(step, problem_size_space_exp + 1, step)],
'mutation_prob': np.arange(.1, .7, .2),
'learning_rate': [0.001, 0.01, 0.1]
}
ga_model = mlrose.NeuralNetwork(random_state=1,
algorithm='genetic_alg',
bias=False,
is_classifier=True,
learning_rate=0.001,
early_stopping=True,
clip_max=5,
max_attempts=5000,
curve=True)
return ga_model, ga_params
def neural_network_tune_rhc():
features, labels = load_data('dataset1', 'train')
x_train, x_test, y_train, y_test = train_test_split(
features, labels, test_size=0.2, random_state=RANDOM_STATE)
restarts = [10, 20, 30, 40, 50]
for i in restarts:
algorithm = 'random_hill_climb'
rhc = mlr.NeuralNetwork(hidden_nodes = [10,10], activation = 'relu', \
algorithm = algorithm, max_iters=5000, restarts=i, \
bias = True, is_classifier = True, learning_rate = 0.1, \
early_stopping = True, clip_max = 1, max_attempts = 100, \
random_state = RANDOM_STATE, curve=True)
print('Random Hill Climbing Restarts=', i)
start_time = time.time()
rhc.fit(x_train, y_train)
end_time = time.time()
total_time = end_time - start_time
print("Fit Time", total_time)
y_train_pred = rhc.predict(x_train)
y_train_accuracy = accuracy_score(y_train, y_train_pred)
print('Train Score', y_train_accuracy)
y_test_pred = rhc.predict(x_test)
y_test_accuracy = accuracy_score(y_test, y_test_pred)
print('Validation Score:', y_test_accuracy)
def eval_nn():
exp = NNExperiment()
alg2curve = {}
max_loss = -1
for alg in [
'random_hill_climb', 'simulated_annealing', 'gradient_descent',
'genetic_alg'
]:
nn = mlrose.NeuralNetwork(
hidden_nodes=[10],
algorithm=alg,
curve=True,
random_state=42,
clip_max=5,
learning_rate=0.0001 if alg == 'gradient_descent' else 0.1,
early_stopping=True,
max_iters=1000,
max_attempts=50,
pop_size=10)
exp.reset(alg, nn)
exp.make_learning_curve()
curve = exp.make_fitness_curve()
if alg == 'gradient_descent':
curve = [[abs(c), float(i)] for i, c in enumerate(curve)]
for c in curve:
try:
if c[0] > max_loss:
max_loss = c[0]
except:
print(c)
raise
alg2curve[alg] = deepcopy(curve)
agg_evaluate_algorithm('nn', alg2curve, max_loss, True)
def neural_network_tune_ga():
features, labels = load_data('dataset1', 'train')
x_train, x_test, y_train, y_test = train_test_split(
features, labels, test_size=0.2, random_state=RANDOM_STATE)
population = [50, 100, 200, 500, 1000]
for i in population:
algorithm = 'genetic_alg'
ga = mlr.NeuralNetwork(hidden_nodes = [10,10], activation = 'relu', \
algorithm = algorithm, max_iters=1000, pop_size = i, \
bias = True, is_classifier = True, learning_rate = 0.1, \
early_stopping = True, clip_max = 1, max_attempts = 100, \
random_state = RANDOM_STATE, curve=True)
print('Genetic Algorithm Population Size =', i)
start_time = time.time()
ga.fit(x_train, y_train)
end_time = time.time()
total_time = end_time - start_time
print("Fit Time", total_time)
y_train_pred = ga.predict(x_train)
y_train_accuracy = accuracy_score(y_train, y_train_pred)
print('Train Score', y_train_accuracy)
y_test_pred = ga.predict(x_test)
y_test_accuracy = accuracy_score(y_test, y_test_pred)
print('Validation Score:', y_test_accuracy)
def ga(X_train, X_test, y_train, y_test):
# Initialize neural network object and fit object
nn_ga = mlrose_hiive.NeuralNetwork(hidden_nodes = [3], activation = 'relu',
algorithm = 'genetic_alg', max_iters = 1000,
is_classifier = True, learning_rate = 0.0001,
clip_max = 5, max_attempts = 100,
random_state = random_seed, curve=True)
start = datetime.datetime.now()
nn_ga.fit(X_train, y_train)
finish = datetime.datetime.now()
nn_ga_fittime = (finish - start).total_seconds()
nn_ga_fitness = nn_ga.fitness_curve
# Predict labels for train set and assess accuracy
y_train_pred = nn_ga.predict(X_train)
y_train_accuracy = accuracy_score(y_train, y_train_pred)
# Predict labels for test set and assess accuracy
y_test_pred = nn_ga.predict(X_test)
y_test_accuracy = accuracy_score(y_test, y_test_pred)
print('----------Neural Networks - Genetic Algorithm------------')
print('Training score: ', y_train_accuracy)
print('Test Score: ', y_test_accuracy)
print('Fit Time: ', nn_ga_fittime)
return nn_ga_fitness
def neural_network_tune_sa():
features, labels = load_data('dataset1', 'train')
x_train, x_test, y_train, y_test = train_test_split(
features, labels, test_size=0.2, random_state=RANDOM_STATE)
decay = [
mlr.GeomDecay(init_temp=1.0, decay=0.99, min_temp=0.001),
mlr.GeomDecay(init_temp=1.0, decay=0.8, min_temp=0.001),
mlr.GeomDecay(init_temp=1.0, decay=0.6, min_temp=0.001),
mlr.GeomDecay(init_temp=1.0, decay=0.4, min_temp=0.001),
mlr.GeomDecay(init_temp=1.0, decay=0.2, min_temp=0.001)
]
for i in decay:
algorithm = 'simulated_annealing'
sa = mlr.NeuralNetwork(hidden_nodes = [10,10], activation = 'relu', \
algorithm = algorithm, max_iters=5000, schedule=i, \
bias = True, is_classifier = True, learning_rate = 0.1, \
early_stopping = True, clip_max = 1, max_attempts = 100, \
random_state = RANDOM_STATE, curve=True)
print('Simulated Annealing Decay Rate=', i)
start_time = time.time()
sa.fit(x_train, y_train)
end_time = time.time()
total_time = end_time - start_time
print("Fit Time", total_time)
y_train_pred = sa.predict(x_train)
y_train_accuracy = accuracy_score(y_train, y_train_pred)
print('Train Score', y_train_accuracy)
y_test_pred = sa.predict(x_test)
y_test_accuracy = accuracy_score(y_test, y_test_pred)
print('Validation Score:', y_test_accuracy)
def mlp_gd(max_iters):
return mlrose_hiive.NeuralNetwork(
hidden_nodes=[10, 10, 10],
algorithm='gradient_descent',
activation='tanh',
learning_rate=0.001, # 0.1, 0.01, 0.001, 0.0001, 0.00001
early_stopping=True,
random_state=SEED,
max_iters=max_iters)
def mlp_rhc(max_iters):
return mlrose_hiive.NeuralNetwork(
hidden_nodes=[10, 10, 10],
activation='tanh',
learning_rate=0.01, # 0.1, 0.01, 0.001, 0.0001, 0.000001
max_iters=max_iters,
early_stopping=True,
random_state=SEED,
restarts=30, # 5, 10, ...
max_attempts=5 # 5, 10, ...
)
def mlp_ga(max_iters):
return mlrose_hiive.NeuralNetwork(
hidden_nodes=[10, 10, 10],
max_iters=max_iters,
algorithm='genetic_alg',
activation='tanh',
learning_rate=0.001, # 0.1, 0.01, 0.001, 0.0001, 0.000001
pop_size=200, # 100, 150, 200, 300
mutation_prob=0.1, # 0.05, 0.1, 0.3
early_stopping=True,
random_state=SEED)
def generate_nn_model(alg_name, hidden_nodes=[30, 20], seed=None):
nn_model = None
## RHC
if (alg_name == 'rhc'):
nn_model = mlrose_hiive.NeuralNetwork(hidden_nodes=hidden_nodes, activation='relu',
algorithm='random_hill_climb',
restarts=50,
bias=True, is_classifier=True,
early_stopping=True, clip_max=5,
random_state=seed,
max_iters=1000,
learning_rate=0.001,
max_attempts=100)
## SA
elif (alg_name == 'sa'):
nn_model = mlrose_hiive.NeuralNetwork(hidden_nodes=hidden_nodes, activation='relu',
algorithm='simulated_annealing',
schedule=mlrose_hiive.ExpDecay(),
bias=True, is_classifier=True,
early_stopping=True, clip_max=5,
random_state=seed,
max_iters=1000,
learning_rate=0.0001,
max_attempts=100)
## GA
elif (alg_name == 'ga'):
nn_model = mlrose_hiive.NeuralNetwork(hidden_nodes=hidden_nodes, activation='relu',
algorithm='genetic_alg',
pop_size = 200,
mutation_prob = 0.25,
bias=True, is_classifier=True,
early_stopping=True, clip_max=5,
random_state=seed,
max_iters=1000,
learning_rate=0.0001,
max_attempts=100)
else:
print('Algorithm Name Error')
return nn_model
def mlp_sa(max_iters):
return mlrose_hiive.NeuralNetwork(
hidden_nodes=[10, 10, 10],
algorithm='simulated_annealing',
activation='tanh',
learning_rate=0.1, # 0.1, 0.01, 0.001, 0.0001, 0.000001
max_iters=max_iters,
early_stopping=True,
schedule=mlrose_hiive.GeomDecay(), # ArithDecay, ExpDecay, GeomDecay
random_state=SEED,
max_attempts=100 # 10, 100, 500
)
def get_model(algorithm, max_iters):
activation = "relu"
print(algorithm)
print(max_iters)
if algorithm == "rh":
return mlrose.NeuralNetwork(hidden_nodes = [10], activation = activation, algorithm = 'random_hill_climb', \
bias = True, is_classifier = True, early_stopping = True, restarts = 5, max_attempts =10,
max_iters = max_iters, clip_max = 10, random_state = randomSeed)
if algorithm == "ga":
return mlrose.NeuralNetwork(hidden_nodes = [10], activation = activation, algorithm = 'genetic_alg', \
bias = True, is_classifier = True, early_stopping = True, max_attempts =10,
max_iters = max_iters, clip_max = 10, mutation_prob = .10, random_state = randomSeed)
if algorithm == "sa":
return mlrose.NeuralNetwork(hidden_nodes = [10], activation = activation, algorithm = 'simulated_annealing', \
bias = True, is_classifier = True, early_stopping = True, max_attempts =10,
max_iters = max_iters, clip_max = 10, schedule = mlrose.GeomDecay(), random_state = randomSeed)
if algorithm == "gd":
return mlrose.NeuralNetwork(hidden_nodes = [10], activation = activation, algorithm = 'gradient_descent', \
bias = True, is_classifier = True, early_stopping = True, max_attempts =10,
max_iters = max_iters, clip_max = 10, random_state = randomSeed)
def genetic_algorithm(X_train, X_test, y_train, y_test, verbose=False):
max_iter_range = np.arange(50, 500, 50)
kwargs = {
'hidden_nodes': HIDDEN_NODES,
'activation': 'relu',
'learning_rate': LEARNING_RATE,
'random_state': RANDOM_SEED_VAL,
'curve': True,
# algorithm-specific
'algorithm': 'genetic_alg',
}
nn_ga = mlrose.NeuralNetwork(**kwargs)
nn_ga.fit(X_train, y_train)
# plot fitness curve
plot_title = "NN weight opt - GA: Ffitness vs. iterations"
plotting_nn.plot_fitness_curves(
fitness_data=pd.DataFrame(nn_ga.fitness_curve),
title=plot_title,
)
plt.savefig('graphs/nn_ga_fitness_curve.png')
plt.clf()
# plot iterative learning curve
lc_df = nn_iterative_lc(X_train, y_train, max_iter_range, kwargs)
plotting_nn.plot_iterative_lc(
lc_df,
title="Learning Curve (max_iters) for GA",
max_iter_range=max_iter_range,
)
plt.savefig('graphs/nn_ga_lc_iterations.png')
plt.clf()
# plot learning curve
train_sizes = np.linspace(0.1, 0.9, 9)
data_proc.plot_learning_curve(
nn_ga,
title="Learning curve for GA",
X=X_train,
y=y_train,
cv=CV_VAL,
train_sizes=train_sizes,
)
plt.savefig('graphs/nn_ga_lc.png')
plt.clf()
def NN_GD(file_name, classifier_col):
X_train, X_test, y_train, y_test = util.data_load(file_name,
classifier_col)
# GD HPs
nodes = [128, 128, 128, 128]
act = 'relu'
seed = 1
gd_algo = 'gradient_descent'
gd_lr = 0.00000009
gd_iter = 10000
gd_ma = 50
gd_clip = 5
learning_rates = [
0.00000009, 0.00000001, 0.000000001, 0.0000001, 0.000001, 0.00001,
0.0001, 0.001, 0.01, 0.1
]
plt.figure()
for lr in learning_rates:
print('lr', lr)
gd_nn_model = mlrose.NeuralNetwork(hidden_nodes=nodes,
activation=act,
random_state=seed,
bias=True,
is_classifier=True,
early_stopping=True,
curve=True,
algorithm=gd_algo,
max_iters=gd_iter,
learning_rate=lr,
clip_max=gd_clip,
max_attempts=gd_ma)
gd_nn_model.fit(X_train, y_train)
gd_curve = gd_nn_model.fitness_curve
inverted_gd_curve = np.array(gd_curve) * -1
plt.plot(inverted_gd_curve, label='lr =' + str(lr))
plt.title("NN GD - Learning Rates")
plt.xlabel('Iterations')
plt.ylabel('Loss')
plt.grid(True)
plt.legend()
plt.savefig("Images\\NN - GD - Learning Rates")
plt.xscale('log')
plt.savefig("Images\\NN - GD - Learning Rates - log")
plt.show()
def train_nn(X_train, y_train, **kwargs):
data_hash = joblib.hash([kwargs, X_train, y_train])
file_name = "cache/nn/%s.dump" % (data_hash)
if os.path.exists(file_name):
print("loading nn from cache for hash=%s, args=%s" %
(data_hash, kwargs))
return joblib.load(file_name)
print("Building nn with %s" % (kwargs))
nn = mlrose.NeuralNetwork(**kwargs)
start = time.time()
nn.fit(X_train, y_train)
nn.time = time.time() - start
joblib.dump(nn, file_name, compress=3)
return nn
def NN_GA(file_name, classifier_col):
X_train, X_test, y_train, y_test = util.data_load(file_name, classifier_col)
activation = ['relu']
learning_rate = [5, 0.01, 0.1, 1, 2, 3, 4, 7, 10]
algorithim = 'genetic_alg'
iters = [1000, 10000, 50000, 100000]
nodes = [128, 128, 128, 128]
population = [2000, 2100,2200,2300]
mutation = [ 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0, 0.1]
outcomes = []
max_attempts = [10, 50, 100, 200, 500, 1000]
clips = [5, 10, 100, 1000, 10000, 100000]
# GA HPs
nodes = [128, 128, 128, 128]
act = 'relu'
seed = 1
ga_algo = 'genetic_alg'
ga_lr = 5
ga_iter = 100
ga_pop = 1500
ga_mut = 0.1
ga_ma = 100
ga_clip = 5
Population = [100, 200, 300, 400, 500, 750, 1000, 1240, 1500]
plt.figure()
for p in Population:
print('Population', p)
ga_nn_model = mlrose.NeuralNetwork(hidden_nodes=nodes, activation=act, max_iters=ga_iter,
algorithm=ga_algo, pop_size=p, mutation_prob=ga_mut,
bias=True, is_classifier=True, learning_rate=ga_lr,
early_stopping=True, clip_max=ga_clip, max_attempts=ga_ma,
random_state=seed, curve=True)
ga_nn_model.fit(X_train, y_train)
plt.plot(ga_nn_model.fitness_curve, label='pop =' + str(p))
plt.title("NN GA - Population")
plt.xlabel('Iterations')
plt.ylabel('Loss')
plt.grid(True)
plt.legend()
plt.savefig("Images\\NN - GA - Population")
plt.xscale('log')
plt.savefig("Images\\NN - GA - Population - log")
plt.show()
def rhc_nn(data):
results = []
for restarts in [0, 2, 4, 8]:
nn = mlrose.NeuralNetwork(hidden_nodes=[8, 8],
activation='relu',
algorithm='random_hill_climb',
max_iters=10000,
learning_rate=0.1,
early_stopping=True,
max_attempts=500,
restarts=restarts,
clip_max=5,
random_state=0,
curve=True)
results.append(run_nn(*data, nn, restarts=restarts))
return results
def ga_nn(data):
results = []
for pop_size in [64, 128, 256, 512]:
nn = mlrose.NeuralNetwork(hidden_nodes=[8, 8],
activation='relu',
algorithm='genetic_alg',
max_iters=1000,
learning_rate=0.001,
early_stopping=True,
max_attempts=100,
pop_size=pop_size,
clip_max=5,
random_state=0,
curve=True)
results.append(run_nn(*data, nn, pop_size=pop_size))
return results
def sa_nn(data):
results = []
for decay in [0.95, 0.975, 0.99, 0.995]:
nn = mlrose.NeuralNetwork(hidden_nodes=[8, 8],
activation='relu',
algorithm='simulated_annealing',
max_iters=10000,
learning_rate=0.1,
early_stopping=True,
max_attempts=500,
schedule=mlrose.GeomDecay(decay=decay),
clip_max=5,
random_state=0,
curve=True)
results.append(run_nn(*data, nn, decay=decay))
return results
def nn_iterative_lc(X, y, max_iter_range, kwargs, cv=None):
df = pd.DataFrame(index=max_iter_range, columns=['train', 'cv', 'train_time', 'cv_time'])
for i in max_iter_range:
kwargs['max_iters'] = i.item()
mlr_nn = mlrose.NeuralNetwork(**kwargs)
# train data
train_t0 = time()
mlr_nn.fit(X, y)
train_time = time() - train_t0
train_score = mlr_nn.score(X, y)
# get cv scores
cv_t0 = time()
cross_vals = cross_val_score(mlr_nn, X, y, cv=CV_VAL)
cv_time = time() - cv_t0
cv_mean = np.mean(cross_vals)
df.loc[i, 'train'] = train_score
df.loc[i, 'cv'] = cv_mean
df.loc[i, 'train_time'] = train_time
df.loc[i, 'cv_time'] = cv_time
return df.astype('float64')
def gradient_descent_benchmark():
x_data, y_data = process_dataset.process_census_data()
x_train, x_test, y_train, y_test = train_test_split(x_data, y_data, train_size=0.6, random_state=86)
scaler = MinMaxScaler()
x_train_scaled = scaler.fit_transform(x_train)
x_test_scaled = scaler.fit_transform(x_test)
ann = mlrose_hiive.NeuralNetwork(hidden_nodes=[32, 32], activation='relu', algorithm='gradient_descent',
max_iters=1000, bias=True, is_classifier=True, learning_rate=0.00001,
max_attempts=200, early_stopping=True, curve=True, random_state=1)
ann.fit(x_train_scaled, y_train)
# predictions = ann.predict(x_test_scaled)
score = accuracy_score(y_test, ann.predict(x_test_scaled))
print("accuracy was: " + str(score))
# figure = evaluate_model_learning_complexity.plot_learning_curve(ann, "DONOTUSE.png", x_train_scaled, y_train_hot)
# figure.savefig("ANN_Gradient_Descent.png")
plt.figure()
plt.plot(ann.fitness_curve)
plt.show()
def rhc(self):
iteration = self.noOfiteration
problem_size_space = self.problem_size
step = problem_size_space // 2
# rhc_params = { 'hidden_nodes': [(3,), (4,), (5,), (5, 5)],
rhc_params = {
'hidden_nodes': [(3, ), (5, ), (5, 5), (10, 10, 10), (5, 5, 5)],
#(10, 10), (5, 5, 5), (10, 10, 10), (20, 20, 20)]
'max_iters': [x for x in range(0, iteration + 1, 1000)],
'restarts': [x for x in range(0, problem_size_space + 1, step)],
'activation': ['tanh', 'relu', 'sigmoid'],
'learning_rate': [0.001, 0.01, 0.1]
}
rhc_model = mlrose.NeuralNetwork(random_state=1,
algorithm='random_hill_climb',
bias=False,
is_classifier=True,
learning_rate=0.001,
early_stopping=True,
clip_max=5,
max_attempts=5000,
curve=True)
return rhc_model, rhc_params
def backprop(self):
iteration = self.noOfiteration
problem_size_space = self.problem_size
problem_size_space_exp = problem_size_space * 10
step = problem_size_space_exp // 2
# backprop_params = { 'hidden_nodes': [(3,), (4,), (5,), (5, 5)],
backprop_params = {
'hidden_nodes': [(3, ), (5, 5), (10, 10, 10), (5, 5, 5),
(10, 10, 10), (20, 20, 20), (5, )],
#(10, 10), (5, 5, 5), (10, 10, 10), (20, 20, 20)]
'activation': ['tanh', 'relu', 'sigmoid'],
'max_iters': [x for x in range(0, iteration + 1, 1000)],
'learning_rate': [0.001, 0.005, 0.01, 0.1, 0.5]
}
backprop_model = mlrose.NeuralNetwork(random_state=1,
algorithm='gradient_descent',
bias=False,
is_classifier=True,
early_stopping=True,
clip_max=5,
max_attempts=5000,
curve=True)
return backprop_model, backprop_params
def nn_impl():
#iris_data = fetch_openml('iris')
#X_whole, y_whole = iris_data['data'], iris_data['target']
sklearn_data = datasets.load_breast_cancer()
x, y = sklearn_data.data, sklearn_data.target
#x = preprocessing.scale(x)
# Split the initial data
xtrain, xtest, ytrain, ytest = train_test_split(x,
y,
test_size=0.4,
random_state=42)
### Analysis for RHC ###
train_accuracy_scores = []
test_accuracy_scores = []
time_per_iteration_rhc = []
for i in range(1, 3000, 50):
print(i)
rhc_nn = mlrose_hiive.NeuralNetwork(hidden_nodes=[2],
activation='identity',
algorithm='random_hill_climb',
bias=False,
is_classifier=True,
learning_rate=0.6,
clip_max=1,
max_attempts=1000,
max_iters=i)
start = time.time()
rhc_nn.fit(xtrain, ytrain)
# Train set analysis
predictions_train = rhc_nn.predict(xtrain)
accuracy_score_train = accuracy_score(ytrain, predictions_train)
train_accuracy_scores.append(accuracy_score_train)
# Test set analysis
predictions_test = rhc_nn.predict(xtest)
accuracy_score_test = accuracy_score(ytest, predictions_test)
test_accuracy_scores.append(accuracy_score_test)
time_per_iteration_rhc.append(time.time() - start)
plt.figure()
plt.plot(np.arange(1, 3000, 50),
np.array(train_accuracy_scores),
label='Train Accuracy')
plt.plot(np.arange(1, 3000, 50),
np.array(test_accuracy_scores),
label='Test Accuracy')
plt.xlabel('Iterations')
plt.ylabel('Accuracy')
plt.title('Accuracy vs. Iterations (RHC)')
plt.legend()
plt.savefig('testacc_iter_rhc.png')
print("Finished RHC")
### Analysis for Simulated Annealing ###
train_accuracy_scores = []
test_accuracy_scores = []
time_per_iteration_sa = []
for i in range(1, 3000, 50):
print(i)
sa_nn = mlrose_hiive.NeuralNetwork(hidden_nodes=[2],
activation='identity',
algorithm='simulated_annealing',
bias=False,
is_classifier=True,
learning_rate=0.6,
clip_max=1,
max_attempts=1000,
max_iters=i)
start = time.time()
sa_nn.fit(xtrain, ytrain)
# Train set analysis
predictions_train = sa_nn.predict(xtrain)
accuracy_score_train = accuracy_score(ytrain, predictions_train)
train_accuracy_scores.append(accuracy_score_train)
# Test set analysis
predictions_test = sa_nn.predict(xtest)
accuracy_score_test = accuracy_score(ytest, predictions_test)
test_accuracy_scores.append(accuracy_score_test)
time_per_iteration_sa.append(time.time() - start)
plt.figure()
plt.plot(np.arange(1, 3000, 50),
np.array(train_accuracy_scores),
label='Train Accuracy')
plt.plot(np.arange(1, 3000, 50),
np.array(test_accuracy_scores),
label='Test Accuracy')
plt.xlabel('Iterations')
plt.ylabel('Accuracy')
plt.title('Accuracy vs. Iterations (SA)')
plt.legend()
plt.savefig('testacc_iter_SA.png')
print("Finished SA")
### Analysis for Genetic Algorithms ###
train_accuracy_scores = []
test_accuracy_scores = []
time_per_iteration_ga = []
for i in range(1, 3000, 50):
print(i)
ga_nn = mlrose_hiive.NeuralNetwork(hidden_nodes=[2],
activation='identity',
algorithm='genetic_alg',
bias=False,
is_classifier=True,
learning_rate=0.6,
clip_max=1,
max_attempts=1000,
max_iters=i)
start = time.time()
ga_nn.fit(xtrain, ytrain)
# Train set analysis
predictions_train = ga_nn.predict(xtrain)
accuracy_score_train = accuracy_score(ytrain, predictions_train)
train_accuracy_scores.append(accuracy_score_train)
# Test set analysis
predictions_test = ga_nn.predict(xtest)
accuracy_score_test = accuracy_score(ytest, predictions_test)
test_accuracy_scores.append(accuracy_score_test)
time_per_iteration_ga.append(time.time() - start)
plt.figure()
plt.plot(np.arange(1, 3000, 50),
np.array(train_accuracy_scores),
label='Train Accuracy')
plt.plot(np.arange(1, 3000, 50),
np.array(test_accuracy_scores),
label='Test Accuracy')
plt.xlabel('Iterations')
plt.ylabel('Accuracy')
plt.title('Accuracy vs. Iterations (GA)')
plt.legend()
plt.savefig('testacc_iter_GA.png')
print("Finished GA")
### Backpropogation (for comparison) ###
train_accuracy_scores = []
test_accuracy_scores = []
time_per_iteration_bp = []
print("backprop start")
for i in range(1, 3000, 50):
print(i)
bp_nn = MLPClassifier(hidden_layer_sizes=(50, ),
activation='logistic',
max_iter=i)
# bp_nn = mlrose_hiive.NeuralNetwork(hidden_nodes=[2], activation='identity',
# algorithm='gradient_descent',
# bias=False, is_classifier=True,
# learning_rate = 0.6, clip_max=1,
# max_attempts=1000, max_iters = i)
start = time.time()
bp_nn.fit(xtrain, ytrain)
# Train set analysis
predictions_train = bp_nn.predict(xtrain)
accuracy_score_train = accuracy_score(ytrain, predictions_train)
train_accuracy_scores.append(accuracy_score_train)
# Test set analysis
predictions_test = bp_nn.predict(xtest)
accuracy_score_test = accuracy_score(ytest, predictions_test)
test_accuracy_scores.append(accuracy_score_test)
time_per_iteration_bp.append(time.time() - start)
plt.figure()
plt.plot(np.arange(1, 3000, 50),
np.array(train_accuracy_scores),
label='Train Accuracy')
plt.plot(np.arange(1, 3000, 50),
np.array(test_accuracy_scores),
label='Test Accuracy')
plt.xlabel('Iterations')
plt.ylabel('Accuracy')
plt.title('Accuracy vs. Iterations (Backpropogation)')
plt.legend()
plt.savefig('testacc_iter_bp.png')
print("Finished Backprop")
### Plot runtimes for above ###
plt.figure()
plt.plot(np.arange(1, 3000, 50),
np.array(time_per_iteration_rhc),
label='RHC')
plt.plot(np.arange(1, 3000, 50),
np.array(time_per_iteration_sa),
label='SA')
plt.plot(np.arange(1, 3000, 50),
np.array(time_per_iteration_ga),
label='GA')
plt.plot(np.arange(1, 3000, 50),
np.array(time_per_iteration_ga),
label='BP')
plt.xlabel('Iterations')
plt.ylabel('Training Time')
plt.title('Training Time vs Iterations')
plt.legend()
plt.savefig('time_vs_iter.png')
#### Hyperparameter Tuning - RHC ####
## Adjusting the number of random restarts ##
train_accuracy_scores = []
test_accuracy_scores = []
for i in range(0, 500, 25):
print(i)
rhc_nn = mlrose_hiive.NeuralNetwork(hidden_nodes=[2],
activation='identity',
algorithm='random_hill_climb',
bias=False,
is_classifier=True,
learning_rate=0.6,
clip_max=1,
max_attempts=1000,
restarts=i)
rhc_nn.fit(xtrain, ytrain)
# Train set analysis
predictions_train = rhc_nn.predict(xtrain)
accuracy_score_train = accuracy_score(ytrain, predictions_train)
train_accuracy_scores.append(accuracy_score_train)
# Test set analysis
predictions_test = rhc_nn.predict(xtest)
accuracy_score_test = accuracy_score(ytest, predictions_test)
test_accuracy_scores.append(accuracy_score_test)
plt.figure()
plt.plot(np.arange(0, 500, 25),
np.array(train_accuracy_scores),
label='Train Accuracy')
plt.plot(np.arange(0, 500, 25),
np.array(test_accuracy_scores),
label='Test Accuracy')
plt.xlabel('Restarts')
plt.ylabel('Accuracy')
plt.title('Accuracy vs. Number of Restarts (RHC)')
plt.legend()
plt.savefig('rhc_restarts.png')
print("Finished RHC HP Tuning")
#### Hyperparameter Tuning - SA ####
## Adjusting the type of scheduling ##
train_accuracy_scores = []
test_accuracy_scores = []
# Referending sectiion 2.2 'Decay Schedules' here:
# https://readthedocs.org/projects/mlrose/downloads/pdf/stable/
schedule_types = [
mlrose_hiive.ExpDecay(),
mlrose_hiive.ArithDecay(),
mlrose_hiive.GeomDecay()
]
for st in schedule_types:
print(st)
sa_nn = mlrose_hiive.NeuralNetwork(hidden_nodes=[2],
activation='identity',
algorithm='simulated_annealing',
bias=False,
is_classifier=True,
learning_rate=0.6,
clip_max=1,
max_attempts=1000,
schedule=st)
sa_nn.fit(xtrain, ytrain)
# Train set analysis
predictions_train = sa_nn.predict(xtrain)
accuracy_score_train = accuracy_score(ytrain, predictions_train)
train_accuracy_scores.append(accuracy_score_train)
# Test set analysis
predictions_test = sa_nn.predict(xtest)
accuracy_score_test = accuracy_score(ytest, predictions_test)
test_accuracy_scores.append(accuracy_score_test)
plt.figure()
plt.plot(['ExpDecay', 'ArithDecay', 'GeomDecay'],
np.array(train_accuracy_scores),
label='Train Accuracy')
plt.plot(['ExpDecay', 'ArithDecay', 'GeomDecay'],
np.array(test_accuracy_scores),
label='Test Accuracy')
plt.xlabel('Schedule Type')
plt.ylabel('Accuracy')
plt.title('Accuracy vs. Schedule Type (SA)')
plt.legend()
plt.savefig('sa_schedule_type.png')
print("Finished SA HP Tuning")
#### Hyperparameter Tuning - GA ####
## Adjusting the amount of mutation
## Used api as referenced in https://readthedocs.org/projects/mlrose/downloads/pdf/stable/
train_accuracy_scores = []
test_accuracy_scores = []
mutation_prob_array = [0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9, 1.0]
for i in mutation_prob_array:
ga_nn = mlrose_hiive.NeuralNetwork(hidden_nodes=[2],
activation='relu',
algorithm='genetic_alg',
bias=False,
is_classifier=True,
learning_rate=0.6,
clip_max=1,
max_attempts=1000,
mutation_prob=i)
ga_nn.fit(xtrain, ytrain)
# Train set analysis
predictions_train = ga_nn.predict(xtrain)
accuracy_score_train = accuracy_score(ytrain, predictions_train)
train_accuracy_scores.append(accuracy_score_train)
# Test set analysis
predictions_test = ga_nn.predict(xtest)
accuracy_score_test = accuracy_score(ytest, predictions_test)
test_accuracy_scores.append(accuracy_score_test)
plt.figure()
plt.plot(mutation_prob_array,
np.array(train_accuracy_scores),
label='Train Accuracy')
plt.plot(mutation_prob_array,
np.array(test_accuracy_scores),
label='Test Accuracy')
plt.xlabel('mutation_prob')
plt.ylabel('Accuracy')
plt.title('Accuracy vs. Iterations (GA - mutation_prob experimentation)')
plt.legend()
plt.savefig('ga_mutation.png')
print("Finished GA mutation experimentation")
## Adjusting the population size
## Used api as referenced in https://readthedocs.org/projects/mlrose/downloads/pdf/stable/
train_accuracy_scores = []
test_accuracy_scores = []
pop_size_array = [100, 200, 300, 400, 500]
for i in pop_size_array:
ga_nn = mlrose_hiive.NeuralNetwork(hidden_nodes=[2],
activation='relu',
algorithm='genetic_alg',
bias=False,
is_classifier=True,
learning_rate=0.6,
clip_max=1,
max_attempts=1000,
pop_size=i)
ga_nn.fit(xtrain, ytrain)
# Train set analysis
predictions_train = ga_nn.predict(xtrain)
accuracy_score_train = accuracy_score(ytrain, predictions_train)
train_accuracy_scores.append(accuracy_score_train)
# Test set analysis
predictions_test = ga_nn.predict(xtest)
accuracy_score_test = accuracy_score(ytest, predictions_test)
test_accuracy_scores.append(accuracy_score_test)
plt.figure()
plt.plot(pop_size_array,
np.array(train_accuracy_scores),
label='Train Accuracy')
plt.plot(pop_size_array,
np.array(test_accuracy_scores),
label='Test Accuracy')
plt.xlabel('pop_size')
plt.ylabel('Accuracy')
plt.title('Accuracy vs. Iterations (GA - pop_size experimentation)')
plt.legend()
plt.savefig('ga_popsize.png')
print("Finished GA pop_size experimentation")
scaler = preprocessing.StandardScaler()
scaler.fit(x_train)
x_train = scaler.transform(x_train)
x_test = scaler.transform(x_test)
for algo in algos:
print('--------------New Algo ', algo, '----------------------')
nn_model = mlrose.NeuralNetwork(hidden_nodes=[3],
activation='relu',
algorithm=algo,
max_iters=100,
bias=True,
is_classifier=True,
learning_rate=0.0001,
early_stopping=False,
clip_max=1,
restarts=30,
schedule=mlrose.ExpDecay(1),
pop_size=300,
mutation_prob=0.4,
max_attempts=10,
random_state=4,
curve=False)
print('Fitting model...')
nn_model.fit(x_train, y_train)
y_train_pred = nn_model.predict(x_train)
print('Training Score: ', accuracy_score(y_train, y_train_pred))
def NN_SA(file_name, classifier_col):
X_train, X_test, y_train, y_test = util.data_load(file_name,
classifier_col)
activation = 'relu'
learning_rate = [0.01, 0.1, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10]
algorithim = 'simulated_annealing'
iters = [
100, 200, 300, 400, 500, 600, 700, 800, 900, 1000, 2000, 3000, 4000,
5000, 6000, 7000, 8000, 9000, 10000
]
nodes = [128, 128, 128, 128]
temperatures = [0.001, 0.01]
decay_rates = [0.9, 0.91, 0.92, 0.93, 0.94, 0.95, 0.96, 0.97, 0.98, 0.99]
outcomes = []
max_attempts = [10, 50, 100, 200, 500, 1000]
clips = [5, 10, 100, 1000, 10000, 100000]
csv_file = 'NN_SA-itertests.csv'
act = 'relu'
lr = 10
itera = 10000
temp = 10000
dec = 0.92
ma = 50
clip = 10
while 1 == 1:
iters_outs = {}
for iter_test in iters:
start = time.time()
print(algorithim, act, lr, iter_test, 'GeomDecay', temp, dec, ma,
clip)
nn_model = mlrose.NeuralNetwork(hidden_nodes=nodes,
activation=act,
max_iters=iter_test,
algorithm=algorithim,
schedule=mlrose.GeomDecay(
init_temp=temp, decay=dec),
bias=True,
is_classifier=True,
learning_rate=lr,
early_stopping=True,
clip_max=clip,
max_attempts=ma,
random_state=1,
curve=True)
nn_model.fit(X_train, y_train)
train_time = time.time() - start
print('Train time', train_time)
start = time.time()
y_train_pred = nn_model.predict(X_train)
y_train_roc = roc_auc_score(y_train,
y_train_pred,
multi_class="ovr",
average="weighted")
print('y_train_roc', y_train_roc)
y_train_query_time = time.time() - start
print('y_train_query_time', y_train_query_time)
start = time.time()
y_test_pred = nn_model.predict(X_test)
y_test_roc = roc_auc_score(y_test,
y_test_pred,
multi_class="ovr",
average="weighted")
print('y_test_roc', y_test_roc)
y_test_query_time = time.time() - start
print('y_test_query_time', y_test_query_time)
nn_loss = nn_model.loss
print('loss', nn_loss)
outcome = {}
outcome['schedule'] = 'GeomDecay'
outcome['activation'] = act
outcome['learning_rate'] = lr
outcome['max_iters'] = iter_test
outcome['temperatures'] = temp
outcome['decay_rates'] = dec
outcome['max_attempts'] = ma
outcome['clip'] = clip
outcome['y_train_roc'] = y_train_roc
outcome['y_test_roc'] = y_test_roc
outcome[
'runtime'] = train_time + y_train_query_time + y_test_query_time
outcome['Train time'] = train_time
outcome['y_train_query_time'] = y_train_query_time
outcome['y_test_query_time'] = y_test_query_time
outcome['loss'] = nn_loss
outcomes.append(outcome)
pd.DataFrame(outcomes).to_csv(csv_file)
iters_outs[iter_test] = y_test_roc
old_val = itera
itera = max(iters_outs, key=iters_outs.get)
print('best iter', itera, 'old', old_val)
raise SystemExit(0)
temp_outs = {}
for temp_test in temperatures:
start = time.time()
print(algorithim, act, lr, itera, 'GeomDecay', temp_test, dec, ma,
clip)
nn_model = mlrose.NeuralNetwork(
hidden_nodes=nodes,
activation=act,
max_iters=itera,
algorithm=algorithim,
schedule=mlrose.GeomDecay(init_temp=temp_test, decay=dec),
bias=True,
is_classifier=True,
learning_rate=lr,
early_stopping=True,
clip_max=clip,
max_attempts=ma,
random_state=1,
curve=True)
nn_model.fit(X_train, y_train)
y_train_pred = nn_model.predict(X_train)
y_train_roc = roc_auc_score(y_train,
y_train_pred,
multi_class="ovr",
average="weighted")
print('y_train_roc', y_train_roc)
y_test_pred = nn_model.predict(X_test)
y_test_roc = roc_auc_score(y_test,
y_test_pred,
multi_class="ovr",
average="weighted")
print('y_test_roc', y_test_roc)
runtime = time.time() - start
print('curr run time', time.time() - start)
outcome = {}
outcome['schedule'] = 'GeomDecay'
outcome['activation'] = act
outcome['learning_rate'] = lr
outcome['max_iters'] = itera
outcome['temperatures'] = temp_test
outcome['decay_rates'] = dec
outcome['max_attempts'] = ma
outcome['clip'] = clip
outcome['y_train_roc'] = y_train_roc
outcome['y_test_roc'] = y_test_roc
outcome['runtime'] = runtime
outcomes.append(outcome)
pd.DataFrame(outcomes).to_csv(csv_file)
temp_outs[temp_test] = y_test_roc
old_temp = temp
temp = max(temp_outs, key=temp_outs.get)
print('best temp', temp, 'old', old_temp)
decay_outs = {}
for decay_test in decay_rates:
start = time.time()
print(algorithim, act, lr, itera, 'GeomDecay', temp, decay_test,
ma, clip)
nn_model = mlrose.NeuralNetwork(hidden_nodes=nodes,
activation=act,
max_iters=itera,
algorithm=algorithim,
schedule=mlrose.GeomDecay(
init_temp=temp,
decay=decay_test),
bias=True,
is_classifier=True,
learning_rate=lr,
early_stopping=True,
clip_max=clip,
max_attempts=ma,
random_state=1,
curve=True)
nn_model.fit(X_train, y_train)
y_train_pred = nn_model.predict(X_train)
y_train_roc = roc_auc_score(y_train,
y_train_pred,
multi_class="ovr",
average="weighted")
print('y_train_roc', y_train_roc)
y_test_pred = nn_model.predict(X_test)
y_test_roc = roc_auc_score(y_test,
y_test_pred,
multi_class="ovr",
average="weighted")
print('y_test_roc', y_test_roc)
runtime = time.time() - start
print('curr run time', time.time() - start)
outcome = {}
outcome['schedule'] = 'GeomDecay'
outcome['activation'] = act
outcome['learning_rate'] = lr
outcome['max_iters'] = itera
outcome['temperatures'] = temp
outcome['decay_rates'] = decay_test
outcome['max_attempts'] = ma
outcome['clip'] = clip
outcome['y_train_roc'] = y_train_roc
outcome['y_test_roc'] = y_test_roc
outcome['runtime'] = runtime
outcomes.append(outcome)
pd.DataFrame(outcomes).to_csv(csv_file)
decay_outs[decay_test] = y_test_roc
old_val = dec
dec = max(decay_outs, key=decay_outs.get)
print('best decay', dec, 'old', old_val)
clips_outs = {}
for clip_test in clips:
start = time.time()
print(algorithim, act, lr, itera, 'GeomDecay', temp, dec, ma,
clip_test)
nn_model = mlrose.NeuralNetwork(hidden_nodes=nodes,
activation=act,
max_iters=itera,
algorithm=algorithim,
schedule=mlrose.GeomDecay(
init_temp=temp, decay=dec),
bias=True,
is_classifier=True,
learning_rate=lr,
early_stopping=True,
clip_max=clip_test,
max_attempts=ma,
random_state=1,
curve=True)
nn_model.fit(X_train, y_train)
y_train_pred = nn_model.predict(X_train)
y_train_roc = roc_auc_score(y_train,
y_train_pred,
multi_class="ovr",
average="weighted")
print('y_train_roc', y_train_roc)
y_test_pred = nn_model.predict(X_test)
y_test_roc = roc_auc_score(y_test,
y_test_pred,
multi_class="ovr",
average="weighted")
print('y_test_roc', y_test_roc)
runtime = time.time() - start
print('curr run time', time.time() - start)
outcome = {}
outcome['schedule'] = 'GeomDecay'
outcome['activation'] = act
outcome['learning_rate'] = lr
outcome['max_iters'] = itera
outcome['temperatures'] = temp
outcome['decay_rates'] = dec
outcome['max_attempts'] = ma
outcome['clip'] = clip_test
outcome['y_train_roc'] = y_train_roc
outcome['y_test_roc'] = y_test_roc
outcome['runtime'] = runtime
outcomes.append(outcome)
pd.DataFrame(outcomes).to_csv(csv_file)
clips_outs[clip_test] = y_test_roc
old_val = clip
clip = max(clips_outs, key=clips_outs.get)
print('best clip', clip, 'old', old_val)
maxa_outs = {}
for maxa_test in max_attempts:
start = time.time()
print(algorithim, act, lr, itera, 'GeomDecay', temp, dec,
maxa_test, clip)
nn_model = mlrose.NeuralNetwork(hidden_nodes=nodes,
activation=act,
max_iters=itera,
algorithm=algorithim,
schedule=mlrose.GeomDecay(
init_temp=temp, decay=dec),
bias=True,
is_classifier=True,
learning_rate=lr,
early_stopping=True,
clip_max=clip,
max_attempts=maxa_test,
random_state=1,
curve=True)
nn_model.fit(X_train, y_train)
y_train_pred = nn_model.predict(X_train)
y_train_roc = roc_auc_score(y_train,
y_train_pred,
multi_class="ovr",
average="weighted")
print('y_train_roc', y_train_roc)
y_test_pred = nn_model.predict(X_test)
y_test_roc = roc_auc_score(y_test,
y_test_pred,
multi_class="ovr",
average="weighted")
print('y_test_roc', y_test_roc)
runtime = time.time() - start
print('curr run time', time.time() - start)
outcome = {}
outcome['schedule'] = 'GeomDecay'
outcome['activation'] = act
outcome['learning_rate'] = lr
outcome['max_iters'] = itera
outcome['temperatures'] = temp
outcome['decay_rates'] = dec
outcome['max_attempts'] = maxa_test
outcome['clip'] = clip
outcome['y_train_roc'] = y_train_roc
outcome['y_test_roc'] = y_test_roc
outcome['runtime'] = runtime
outcomes.append(outcome)
pd.DataFrame(outcomes).to_csv(csv_file)
maxa_outs[maxa_test] = y_test_roc
old_val = ma
ma = max(maxa_outs, key=maxa_outs.get)
print('best ma', ma, 'old', old_val)
lr_outs = {}
for lr_test in learning_rate:
start = time.time()
print(algorithim, act, lr_test, itera, 'GeomDecay', temp, dec, ma,
clip)
nn_model = mlrose.NeuralNetwork(hidden_nodes=nodes,
activation=act,
max_iters=itera,
algorithm=algorithim,
schedule=mlrose.GeomDecay(
init_temp=temp, decay=dec),
bias=True,
is_classifier=True,
learning_rate=lr_test,
early_stopping=True,
clip_max=clip,
max_attempts=ma,
random_state=1,
curve=True)
nn_model.fit(X_train, y_train)
y_train_pred = nn_model.predict(X_train)
y_train_roc = roc_auc_score(y_train,
y_train_pred,
multi_class="ovr",
average="weighted")
print('y_train_roc', y_train_roc)
y_test_pred = nn_model.predict(X_test)
y_test_roc = roc_auc_score(y_test,
y_test_pred,
multi_class="ovr",
average="weighted")
print('y_test_roc', y_test_roc)
runtime = time.time() - start
print('curr run time', time.time() - start)
outcome = {}
outcome['schedule'] = 'GeomDecay'
outcome['activation'] = act
outcome['learning_rate'] = lr_test
outcome['max_iters'] = itera
outcome['temperatures'] = temp
outcome['decay_rates'] = dec
outcome['max_attempts'] = ma
outcome['clip'] = clip
outcome['y_train_roc'] = y_train_roc
outcome['y_test_roc'] = y_test_roc
outcome['runtime'] = runtime
outcomes.append(outcome)
pd.DataFrame(outcomes).to_csv(csv_file)
lr_outs[lr_test] = y_test_roc
old_lr = lr
lr = max(lr_outs, key=lr_outs.get)
print('best lr', lr, 'old', old_lr)