def instantiate_from(self, filename):
datadir = os.environ.get('FHIR_UNITTEST_DATADIR') or \
os.path.abspath(os.path.join(os.path.dirname(__file__), '..', '..', 'fhir-parser', 'downloads'))
with io.open(os.path.join(datadir, filename), 'r',
encoding='utf-8') as handle:
js = json.load(handle)
self.assertEqual("Bundle", js["resourceType"])
return bundle.Bundle(js)
def testBundle10(self):
inst = self.instantiate_from("location-examples-general.json")
self.assertIsNotNone(inst, "Must have instantiated a Bundle instance")
self.implBundle10(inst)
js = inst.as_json()
self.assertEqual("Bundle", js["resourceType"])
inst2 = bundle.Bundle(js)
self.implBundle10(inst2)
def testBundle9(self):
inst = self.instantiate_from("document-example-dischargesummary.json")
self.assertIsNotNone(inst, "Must have instantiated a Bundle instance")
self.implBundle9(inst)
js = inst.as_json()
self.assertEqual("Bundle", js["resourceType"])
inst2 = bundle.Bundle(js)
self.implBundle9(inst2)
def testBundle5(self):
inst = self.instantiate_from("diagnosticreport-example-lipids.json")
self.assertIsNotNone(inst, "Must have instantiated a Bundle instance")
self.implBundle5(inst)
js = inst.as_json()
self.assertEqual("Bundle", js["resourceType"])
inst2 = bundle.Bundle(js)
self.implBundle5(inst2)
def testBundleReferences(self):
with io.open(os.path.join(filedir, 'test_bundle.json'),
'r',
encoding='utf-8') as h:
data = json.load(h)
b = bundle.Bundle(data)
self.assertIsNotNone(b, "Must instantiate Bundle")
self.assertEqual('Bundle', b.resource_type)
b._server = MockServer()
# get resources
pat23 = b.entry[0].resource
self.assertEqual('Patient', pat23.resource_type)
self.assertEqual('Darth', pat23.name[0].given[0])
patURN = b.entry[1].resource
self.assertEqual('Patient', patURN.resource_type)
self.assertEqual('Ben', patURN.name[0].given[0])
obs123 = b.entry[2].resource
self.assertEqual('Observation', obs123.resource_type)
obs56 = b.entry[3].resource
self.assertEqual('Observation', obs56.resource_type)
obs34 = b.entry[4].resource
self.assertEqual('Observation', obs34.resource_type)
# test resolving w/o server (won't work)
res = obs123.subject.resolved(patient.Patient)
# TODO: Patient 23 is now part of the bundle, so the test below fails
# self.assertIsNone(res)
# test resolving with server
b._server = MockServer()
res = obs123.subject.resolved(patient.Patient)
self.assertEqual(res, pat23)
res = obs123.subject.resolved(medication.Medication)
self.assertIsNone(res, "Must not resolve on type mismatch")
res = obs56.subject.resolved(patient.Patient)
self.assertEqual(res, patURN)
res = obs34.subject.resolved(patient.Patient)
self.assertIsNone(
res,
"Must not resolve Patient on same server but different endpoint")
